RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 RBP5P82980 135 aa19.03■□□□□ 0.64
PDLIM4-202ENST00000379018 KDSRQ06136 332 aa19.03■□□□□ 0.64
PDLIM4-202ENST00000379018 IFRD2Q12894 506 aaPredicted RBP19.03■□□□□ 0.64
PDLIM4-202ENST00000379018 SF3A1Q15459 793 aaKnown RBP19.03■□□□□ 0.64
PDLIM4-202ENST00000379018 CFAP221Q4G0U5 840 aa19.03■□□□□ 0.64
PDLIM4-202ENST00000379018 L1TD1Q5T7N2 865 aaKnown RBP19.03■□□□□ 0.64
PDLIM4-202ENST00000379018 TMEM92Q6UXU6 159 aa19.03■□□□□ 0.64
PDLIM4-202ENST00000379018 C4orf50Q6ZRC1 276 aa19.03■□□□□ 0.64
PDLIM4-202ENST00000379018 USP49Q70CQ1 688 aa19.03■□□□□ 0.64
PDLIM4-202ENST00000379018 RASSF3Q86WH2 238 aa19.03■□□□□ 0.64
PDLIM4-202ENST00000379018 TMEFF1Q8IYR6 380 aa19.03■□□□□ 0.64
PDLIM4-202ENST00000379018 LRRC52Q8N7C0 313 aa19.03■□□□□ 0.64
PDLIM4-202ENST00000379018 FRMD1Q8N878 549 aa19.03■□□□□ 0.64
PDLIM4-202ENST00000379018 TXNDC5Q8NBS9 432 aaKnown RBP19.03■□□□□ 0.64
PDLIM4-202ENST00000379018 TMX3Q96JJ7 454 aa19.03■□□□□ 0.64
PDLIM4-202ENST00000379018 SPACA7Q96KW9 195 aa19.03■□□□□ 0.64
PDLIM4-202ENST00000379018 TRPM5Q9NZQ8 1165 aa19.03■□□□□ 0.64
PDLIM4-202ENST00000379018 MAGEC2Q9UBF1 373 aaPredicted RBP19.03■□□□□ 0.64
PDLIM4-202ENST00000379018 SIX4Q9UIU6 781 aa19.03■□□□□ 0.64
PDLIM4-202ENST00000379018 ITGA11Q9UKX5 1188 aa19.03■□□□□ 0.64
PDLIM4-202ENST00000379018 GTF3C3Q9Y5Q9 886 aa19.03■□□□□ 0.64
PDLIM4-202ENST00000379018 PTPRDP23468 1912 aa19.03■□□□□ 0.64
PDLIM4-202ENST00000379018 BAHCC1Q9P281 2608 aa19.02■□□□□ 0.64
PDLIM4-202ENST00000379018 PPP1R37O75864 691 aa19.02■□□□□ 0.64
PDLIM4-202ENST00000379018 CYP17A1P05093 508 aa19.02■□□□□ 0.64
PDLIM4-202ENST00000379018 PDGFRBP09619 1106 aa19.02■□□□□ 0.64
PDLIM4-202ENST00000379018 CEACAM1P13688 526 aa19.02■□□□□ 0.64
PDLIM4-202ENST00000379018 IDEP14735 1019 aa19.02■□□□□ 0.64
PDLIM4-202ENST00000379018 PI4KAP42356 2102 aa19.02■□□□□ 0.64
PDLIM4-202ENST00000379018 SLC6A11P48066 632 aa19.02■□□□□ 0.64
PDLIM4-202ENST00000379018 CASP5P51878 434 aa19.02■□□□□ 0.64
PDLIM4-202ENST00000379018 ZXDBP98169 803 aa19.02■□□□□ 0.64
PDLIM4-202ENST00000379018 POU5F1Q01860 360 aaKnown RBP19.02■□□□□ 0.64
PDLIM4-202ENST00000379018 CRY1Q16526 586 aa19.02■□□□□ 0.64
PDLIM4-202ENST00000379018 SOWAHAQ2M3V2 549 aa19.02■□□□□ 0.64
PDLIM4-202ENST00000379018 PGBD3Q8N328 593 aa19.02■□□□□ 0.64
PDLIM4-202ENST00000379018 TOP6BLQ8N6T0 577 aa19.02■□□□□ 0.64
PDLIM4-202ENST00000379018 HMGB4Q8WW32 186 aa19.02■□□□□ 0.64
PDLIM4-202ENST00000379018 FUBP3Q96I24 572 aaKnown RBP eCLIP19.02■□□□□ 0.64
PDLIM4-202ENST00000379018 CBWD1Q9BRT8 395 aa19.02■□□□□ 0.64
PDLIM4-202ENST00000379018 NUSAP1Q9BXS6 441 aaKnown RBP19.02■□□□□ 0.64
PDLIM4-202ENST00000379018 SMC3Q9UQE7 1217 aa19.02■□□□□ 0.64
PDLIM4-202ENST00000379018 ATRXP46100 2492 aa19.01■□□□□ 0.63
PDLIM4-202ENST00000379018 MYMKA6NI61 221 aa19.01■□□□□ 0.63
PDLIM4-202ENST00000379018 BMP15O95972 392 aa19.01■□□□□ 0.63
PDLIM4-202ENST00000379018 CSRP1P21291 193 aaKnown RBP19.01■□□□□ 0.63
PDLIM4-202ENST00000379018 LMO2P25791 158 aa19.01■□□□□ 0.63
PDLIM4-202ENST00000379018 PDE6CP51160 858 aa19.01■□□□□ 0.63
PDLIM4-202ENST00000379018 MESP2Q0VG99 397 aa19.01■□□□□ 0.63
PDLIM4-202ENST00000379018 GAB4Q2WGN9 574 aa19.01■□□□□ 0.63
PDLIM4-202ENST00000379018 EMC10Q5UCC4 262 aa19.01■□□□□ 0.63
PDLIM4-202ENST00000379018 DENND5BQ6ZUT9 1274 aa19.01■□□□□ 0.63
PDLIM4-202ENST00000379018 LPCAT2Q7L5N7 544 aa19.01■□□□□ 0.63
PDLIM4-202ENST00000379018 C12orf40Q86WS4 652 aa19.01■□□□□ 0.63
PDLIM4-202ENST00000379018 SPATA18Q8TC71 538 aa19.01■□□□□ 0.63
PDLIM4-202ENST00000379018 ZCCHC14Q8WYQ9 949 aaKnown RBP19.01■□□□□ 0.63
PDLIM4-202ENST00000379018 ANKRD36BP1Q96IX9 119 aa19.01■□□□□ 0.63
PDLIM4-202ENST00000379018 FGFBP2Q9BYJ0 223 aa19.01■□□□□ 0.63
PDLIM4-202ENST00000379018 CRTAC1Q9NQ79 661 aa19.01■□□□□ 0.63
PDLIM4-202ENST00000379018 FSCN3Q9NQT6 498 aa19.01■□□□□ 0.63
PDLIM4-202ENST00000379018 GDAP2Q9NXN4 497 aa19.01■□□□□ 0.63
PDLIM4-202ENST00000379018 CPQQ9Y646 472 aa19.01■□□□□ 0.63
PDLIM4-202ENST00000379018 ADAMTS9Q9P2N4 1935 aa19■□□□□ 0.63
PDLIM4-202ENST00000379018 CACNA1EQ15878 2313 aa19■□□□□ 0.63
PDLIM4-202ENST00000379018 SGK1O00141 431 aa19■□□□□ 0.63
PDLIM4-202ENST00000379018 HYAL3O43820 417 aaPredicted RBP19■□□□□ 0.63
PDLIM4-202ENST00000379018 LDHAP00338 332 aaKnown RBP19■□□□□ 0.63
PDLIM4-202ENST00000379018 APODP05090 189 aa19■□□□□ 0.63
PDLIM4-202ENST00000379018 CFIP05156 583 aa19■□□□□ 0.63
PDLIM4-202ENST00000379018 PTGER3P43115 390 aa19■□□□□ 0.63
PDLIM4-202ENST00000379018 MAGEA11P43364 429 aa19■□□□□ 0.63
PDLIM4-202ENST00000379018 MYO1EQ12965 1108 aa19■□□□□ 0.63
PDLIM4-202ENST00000379018 RESTQ13127 1097 aa19■□□□□ 0.63
PDLIM4-202ENST00000379018 RABEP1Q15276 862 aa19■□□□□ 0.63
PDLIM4-202ENST00000379018 DHCR24Q15392 516 aa19■□□□□ 0.63
PDLIM4-202ENST00000379018 LARP1BQ659C4 914 aaKnown RBP19■□□□□ 0.63
PDLIM4-202ENST00000379018 DEFB119Q8N690 84 aa19■□□□□ 0.63
PDLIM4-202ENST00000379018 KDF1Q8NAX2 398 aaPredicted RBP19■□□□□ 0.63
PDLIM4-202ENST00000379018 CXorf38Q8TB03 319 aa19■□□□□ 0.63
PDLIM4-202ENST00000379018 WHAMMQ8TF30 809 aa19■□□□□ 0.63
PDLIM4-202ENST00000379018 HPDLQ96IR7 371 aa19■□□□□ 0.63
PDLIM4-202ENST00000379018 MMS19Q96T76 1030 aa19■□□□□ 0.63
PDLIM4-202ENST00000379018 CFAP97Q9P2B7 532 aa19■□□□□ 0.63
PDLIM4-202ENST00000379018 CCDC39Q9UFE4 941 aa19■□□□□ 0.63
PDLIM4-202ENST00000379018 WASF3Q9UPY6 502 aa19■□□□□ 0.63
PDLIM4-202ENST00000379018 ZFYVE26Q68DK2 2539 aa19■□□□□ 0.63
PDLIM4-202ENST00000379018 MYO18AQ92614 2054 aaKnown RBP18.99■□□□□ 0.63
PDLIM4-202ENST00000379018 SPAARA0A1B0GVQ0 90 aa18.99■□□□□ 0.63
PDLIM4-202ENST00000379018 TCRBV21S2A2A0A5A6 115 aa18.99■□□□□ 0.63
PDLIM4-202ENST00000379018 GABRDO14764 452 aa18.99■□□□□ 0.63
PDLIM4-202ENST00000379018 ZZEF1O43149 2961 aa18.99■□□□□ 0.63
PDLIM4-202ENST00000379018 MBL2P11226 248 aaPredicted RBP18.99■□□□□ 0.63
PDLIM4-202ENST00000379018 GAP43P17677 238 aa18.99■□□□□ 0.63
PDLIM4-202ENST00000379018 ENGP17813 658 aa18.99■□□□□ 0.63
PDLIM4-202ENST00000379018 MRPS21P82921 87 aaKnown RBP18.99■□□□□ 0.63
PDLIM4-202ENST00000379018 LMAN2Q12907 356 aa18.99■□□□□ 0.63
PDLIM4-202ENST00000379018 MDH1BQ5I0G3 518 aa18.99■□□□□ 0.63
PDLIM4-202ENST00000379018 RRAGBQ5VZM2 374 aa18.99■□□□□ 0.63
PDLIM4-202ENST00000379018 FAM171BQ6P995 826 aa18.99■□□□□ 0.63
PDLIM4-202ENST00000379018 SV2BQ7L1I2 683 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms