RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 ARL5CA6NH57 179 aa20.42■□□□□ 0.86
SSU72-204ENST00000378726 ZNF623O75123 536 aa20.42■□□□□ 0.86
SSU72-204ENST00000378726 IGFBP6P24592 240 aaPredicted RBP20.42■□□□□ 0.86
SSU72-204ENST00000378726 PSMA2P25787 234 aa20.42■□□□□ 0.86
SSU72-204ENST00000378726 PKDCCQ504Y2 493 aa20.42■□□□□ 0.86
SSU72-204ENST00000378726 RNF187Q5TA31 235 aaPredicted RBP20.42■□□□□ 0.86
SSU72-204ENST00000378726 ARFGAP2Q8N6H7 521 aa20.42■□□□□ 0.86
SSU72-204ENST00000378726 NIPA2Q8N8Q9 360 aa20.42■□□□□ 0.86
SSU72-204ENST00000378726 SLAIN1Q8ND83 568 aa20.42■□□□□ 0.86
SSU72-204ENST00000378726 EXD1Q8NHP7 514 aa20.42■□□□□ 0.86
SSU72-204ENST00000378726 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.42■□□□□ 0.86
SSU72-204ENST00000378726 SLC12A6Q9UHW9 1150 aa20.42■□□□□ 0.86
SSU72-204ENST00000378726 IBSPP21815 317 aaPredicted RBP20.41■□□□□ 0.86
SSU72-204ENST00000378726 GRK4P32298 578 aa20.41■□□□□ 0.86
SSU72-204ENST00000378726 IFT88Q13099 833 aa20.41■□□□□ 0.86
SSU72-204ENST00000378726 DHX34Q14147 1143 aaKnown RBP20.41■□□□□ 0.86
SSU72-204ENST00000378726 CYP1B1Q16678 543 aa20.41■□□□□ 0.86
SSU72-204ENST00000378726 ZFYVE27Q5T4F4 411 aa20.41■□□□□ 0.86
SSU72-204ENST00000378726 CCDC137Q6PK04 289 aaKnown RBP20.41■□□□□ 0.86
SSU72-204ENST00000378726 YTHDF3Q7Z739 585 aaKnown RBP20.41■□□□□ 0.86
SSU72-204ENST00000378726 EMC1Q8N766 993 aa20.41■□□□□ 0.86
SSU72-204ENST00000378726 RNF169Q8NCN4 708 aa20.41■□□□□ 0.86
SSU72-204ENST00000378726 MIS12Q9H081 205 aa20.41■□□□□ 0.86
SSU72-204ENST00000378726 TRPV6Q9H1D0 765 aa20.41■□□□□ 0.86
SSU72-204ENST00000378726 LRRC4CQ9HCJ2 640 aa20.41■□□□□ 0.86
SSU72-204ENST00000378726 CACNG4Q9UBN1 327 aa20.41■□□□□ 0.86
SSU72-204ENST00000378726 THSD7BQ9C0I4 1608 aa20.41■□□□□ 0.86
SSU72-204ENST00000378726 PDCD11Q14690 1871 aaKnown RBP20.41■□□□□ 0.86
SSU72-204ENST00000378726 E5RJQ4 531 aa20.41■□□□□ 0.86
SSU72-204ENST00000378726 CYB561D2O14569 222 aa20.41■□□□□ 0.86
SSU72-204ENST00000378726 RGS7P49802 495 aa20.41■□□□□ 0.86
SSU72-204ENST00000378726 DSC3Q14574 896 aa20.41■□□□□ 0.86
SSU72-204ENST00000378726 LRRC38Q5VT99 294 aa20.41■□□□□ 0.86
SSU72-204ENST00000378726 ARHGAP17Q68EM7 881 aa20.41■□□□□ 0.86
SSU72-204ENST00000378726 OR6B2Q6IFH4 312 aa20.41■□□□□ 0.86
SSU72-204ENST00000378726 PMF1Q6P1K2 205 aa20.41■□□□□ 0.86
SSU72-204ENST00000378726 TTC27Q6P3X3 843 aa20.41■□□□□ 0.86
SSU72-204ENST00000378726 ADGRF2Q8IZF7 708 aa20.41■□□□□ 0.86
SSU72-204ENST00000378726 FNIP1Q8TF40 1166 aa20.41■□□□□ 0.86
SSU72-204ENST00000378726 SLC35F5Q8WV83 523 aa20.41■□□□□ 0.86
SSU72-204ENST00000378726 MAIP1Q8WWC4 291 aa20.41■□□□□ 0.86
SSU72-204ENST00000378726 ADAM2Q99965 735 aa20.41■□□□□ 0.86
SSU72-204ENST00000378726 HERPUD2Q9BSE4 406 aa20.41■□□□□ 0.86
SSU72-204ENST00000378726 TRAIPQ9BWF2 469 aa20.41■□□□□ 0.86
SSU72-204ENST00000378726 HEMGNQ9BXL5 484 aa20.41■□□□□ 0.86
SSU72-204ENST00000378726 DPH5Q9H2P9 285 aa20.41■□□□□ 0.86
SSU72-204ENST00000378726 PCYOX1Q9UHG3 505 aa20.41■□□□□ 0.86
SSU72-204ENST00000378726 A0A0U1RQF3 1178 aa20.4■□□□□ 0.86
SSU72-204ENST00000378726 SRRM3A6NNA2 597 aaPredicted RBP20.4■□□□□ 0.86
SSU72-204ENST00000378726 RALAP11233 206 aa20.4■□□□□ 0.86
SSU72-204ENST00000378726 COILP38432 576 aaPredicted RBP20.4■□□□□ 0.86
SSU72-204ENST00000378726 SCNN1GP51170 649 aa20.4■□□□□ 0.86
SSU72-204ENST00000378726 FAM102AQ5T9C2 384 aaPredicted RBP20.4■□□□□ 0.86
SSU72-204ENST00000378726 TMC3Q7Z5M5 1100 aa20.4■□□□□ 0.86
SSU72-204ENST00000378726 TOP6BLQ8N6T0 577 aa20.4■□□□□ 0.86
SSU72-204ENST00000378726 RNF25Q96BH1 459 aaPredicted RBP20.4■□□□□ 0.86
SSU72-204ENST00000378726 TRIM51Q9BSJ1 452 aa20.4■□□□□ 0.86
SSU72-204ENST00000378726 FAM187AA6NFU0 413 aa20.39■□□□□ 0.86
SSU72-204ENST00000378726 DCDC2CA8MYV0 355 aa20.39■□□□□ 0.86
SSU72-204ENST00000378726 PTGIRP43119 386 aa20.39■□□□□ 0.86
SSU72-204ENST00000378726 RAB27AP51159 221 aa20.39■□□□□ 0.86
SSU72-204ENST00000378726 C6orf89Q6UWU4 347 aa20.39■□□□□ 0.86
SSU72-204ENST00000378726 CCDC105Q8IYK2 499 aa20.39■□□□□ 0.86
SSU72-204ENST00000378726 RCOR2Q8IZ40 523 aa20.39■□□□□ 0.86
SSU72-204ENST00000378726 SEC14L1Q92503 715 aa20.39■□□□□ 0.86
SSU72-204ENST00000378726 ERP44Q9BS26 406 aa20.39■□□□□ 0.86
SSU72-204ENST00000378726 OSBPL8Q9BZF1 889 aa20.39■□□□□ 0.86
SSU72-204ENST00000378726 DNAI2Q9GZS0 605 aa20.39■□□□□ 0.86
SSU72-204ENST00000378726 RAB17Q9H0T7 212 aa20.39■□□□□ 0.86
SSU72-204ENST00000378726 LRRC19Q9H756 370 aa20.39■□□□□ 0.86
SSU72-204ENST00000378726 NOVA2Q9UNW9 492 aaKnown RBP20.39■□□□□ 0.86
SSU72-204ENST00000378726 GMNCA6NCL1 334 aa20.39■□□□□ 0.85
SSU72-204ENST00000378726 H0YHG0 523 aa20.39■□□□□ 0.85
SSU72-204ENST00000378726 SETSIPP0DME0 302 aa20.39■□□□□ 0.85
SSU72-204ENST00000378726 CKBP12277 381 aa20.39■□□□□ 0.85
SSU72-204ENST00000378726 CLCNKBP51801 687 aa20.39■□□□□ 0.85
SSU72-204ENST00000378726 JAMLQ86YT9 394 aa20.39■□□□□ 0.85
SSU72-204ENST00000378726 ZNF784Q8NCA9 323 aaPredicted RBP20.39■□□□□ 0.85
SSU72-204ENST00000378726 C1orf54Q8WWF1 131 aa20.39■□□□□ 0.85
SSU72-204ENST00000378726 TRIM31Q9BZY9 425 aa20.39■□□□□ 0.85
SSU72-204ENST00000378726 STARD7Q9NQZ5 370 aa20.39■□□□□ 0.85
SSU72-204ENST00000378726 KLHL11Q9NVR0 708 aa20.39■□□□□ 0.85
SSU72-204ENST00000378726 A0A1W2PQ45 241 aaPredicted RBP20.38■□□□□ 0.85
SSU72-204ENST00000378726 A0A1W2PQY0 241 aa20.38■□□□□ 0.85
SSU72-204ENST00000378726 CCDC130P13994 396 aa20.38■□□□□ 0.85
SSU72-204ENST00000378726 WARSP23381 471 aaKnown RBP20.38■□□□□ 0.85
SSU72-204ENST00000378726 ADORA2BP29275 332 aa20.38■□□□□ 0.85
SSU72-204ENST00000378726 CETN2P41208 172 aa20.38■□□□□ 0.85
SSU72-204ENST00000378726 KCNJ1P48048 391 aa20.38■□□□□ 0.85
SSU72-204ENST00000378726 DHX9Q08211 1270 aaKnown RBP20.38■□□□□ 0.85
SSU72-204ENST00000378726 MTMR3Q13615 1198 aa20.38■□□□□ 0.85
SSU72-204ENST00000378726 QPCTQ16769 361 aa20.38■□□□□ 0.85
SSU72-204ENST00000378726 ODF2Q5BJF6 829 aa20.38■□□□□ 0.85
SSU72-204ENST00000378726 AGBL2Q5U5Z8 902 aa20.38■□□□□ 0.85
SSU72-204ENST00000378726 TXNRD3NBQ6F5E7 133 aa20.38■□□□□ 0.85
SSU72-204ENST00000378726 FAM183BPQ6ZVS7 135 aa20.38■□□□□ 0.85
SSU72-204ENST00000378726 TMEM110Q86TL2 294 aa20.38■□□□□ 0.85
SSU72-204ENST00000378726 OSTM1Q86WC4 334 aa20.38■□□□□ 0.85
SSU72-204ENST00000378726 ARFGAP1Q8N6T3 406 aa20.38■□□□□ 0.85
SSU72-204ENST00000378726 ANKRD52Q8NB46 1076 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms