RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 ZNF132P52740 706 aa12.41□□□□□ -0.42
DEPDC4-202ENST00000378244 ITIH5Q86UX2 942 aa12.41□□□□□ -0.42
DEPDC4-202ENST00000378244 FAM81BQ96LP2 452 aa12.41□□□□□ -0.42
DEPDC4-202ENST00000378244 NECAB3Q96P71 396 aaPredicted RBP12.41□□□□□ -0.42
DEPDC4-202ENST00000378244 STK33Q9BYT3 514 aa12.41□□□□□ -0.42
DEPDC4-202ENST00000378244 FAM124BQ9H5Z6 455 aaPredicted RBP12.41□□□□□ -0.42
DEPDC4-202ENST00000378244 HESX1Q9UBX0 185 aa12.41□□□□□ -0.42
DEPDC4-202ENST00000378244 MTCL1Q9Y4B5 1905 aaKnown RBP12.41□□□□□ -0.42
DEPDC4-202ENST00000378244 CLUHO75153 1309 aa12.41□□□□□ -0.42
DEPDC4-202ENST00000378244 SLC38A8A6NNN8 435 aa12.4□□□□□ -0.42
DEPDC4-202ENST00000378244 PIK3R2O00459 728 aa12.4□□□□□ -0.42
DEPDC4-202ENST00000378244 TRIM66O15016 1216 aa12.4□□□□□ -0.42
DEPDC4-202ENST00000378244 AP5Z1O43299 807 aa12.4□□□□□ -0.42
DEPDC4-202ENST00000378244 ABL1P00519 1130 aa12.4□□□□□ -0.42
DEPDC4-202ENST00000378244 BMP1P13497 986 aa12.4□□□□□ -0.42
DEPDC4-202ENST00000378244 HMGA1P17096 107 aaKnown RBP12.4□□□□□ -0.42
DEPDC4-202ENST00000378244 NPR3P17342 541 aa12.4□□□□□ -0.42
DEPDC4-202ENST00000378244 FSHRP23945 695 aa12.4□□□□□ -0.42
DEPDC4-202ENST00000378244 PTK2Q05397 1052 aa12.4□□□□□ -0.42
DEPDC4-202ENST00000378244 PDE4CQ08493 712 aa12.4□□□□□ -0.42
DEPDC4-202ENST00000378244 STXBP5Q5T5C0 1151 aa12.4□□□□□ -0.42
DEPDC4-202ENST00000378244 RTL10Q7L3V2 364 aa12.4□□□□□ -0.42
DEPDC4-202ENST00000378244 PASD1Q8IV76 773 aa12.4□□□□□ -0.42
DEPDC4-202ENST00000378244 ZNF606Q8WXB4 792 aa12.4□□□□□ -0.42
DEPDC4-202ENST00000378244 DUSP16Q9BY84 665 aa12.4□□□□□ -0.42
DEPDC4-202ENST00000378244 TRIM5Q9C035 493 aa12.4□□□□□ -0.42
DEPDC4-202ENST00000378244 ATXN3LQ9H3M9 355 aa12.4□□□□□ -0.42
DEPDC4-202ENST00000378244 SLITRK6Q9H5Y7 841 aa12.4□□□□□ -0.42
DEPDC4-202ENST00000378244 CNTN6Q9UQ52 1028 aa12.4□□□□□ -0.42
DEPDC4-202ENST00000378244 M0QYV0 167 aa12.4□□□□□ -0.42
DEPDC4-202ENST00000378244 TAF3Q5VWG9 929 aa12.4□□□□□ -0.42
DEPDC4-202ENST00000378244 GAREM2Q75VX8 874 aa12.4□□□□□ -0.42
DEPDC4-202ENST00000378244 GPRIN1Q7Z2K8 1008 aa12.4□□□□□ -0.42
DEPDC4-202ENST00000378244 FAM71AQ8IYT1 594 aa12.4□□□□□ -0.42
DEPDC4-202ENST00000378244 TTC16Q8NEE8 873 aa12.4□□□□□ -0.42
DEPDC4-202ENST00000378244 MCRS1Q96EZ8 462 aa12.4□□□□□ -0.42
DEPDC4-202ENST00000378244 C8orf48Q96LL4 319 aa12.4□□□□□ -0.42
DEPDC4-202ENST00000378244 NECTIN4Q96NY8 510 aa12.4□□□□□ -0.42
DEPDC4-202ENST00000378244 ANP32EQ9BTT0 268 aa12.4□□□□□ -0.42
DEPDC4-202ENST00000378244 FAM50BQ9Y247 325 aa12.4□□□□□ -0.42
DEPDC4-202ENST00000378244 BDP1A6H8Y1 2624 aa12.4□□□□□ -0.42
DEPDC4-202ENST00000378244 NCOR1O75376 2440 aa12.4□□□□□ -0.43
DEPDC4-202ENST00000378244 TCF20Q9UGU0 1960 aaKnown RBP12.39□□□□□ -0.43
DEPDC4-202ENST00000378244 MICAL2O94851 1124 aa12.39□□□□□ -0.43
DEPDC4-202ENST00000378244 TPM3P06753 285 aa12.39□□□□□ -0.43
DEPDC4-202ENST00000378244 CSH1P0DML2 217 aa12.39□□□□□ -0.43
DEPDC4-202ENST00000378244 CSH2P0DML3 217 aa12.39□□□□□ -0.43
DEPDC4-202ENST00000378244 RFX1P22670 979 aa12.39□□□□□ -0.43
DEPDC4-202ENST00000378244 RGS7P49802 495 aa12.39□□□□□ -0.43
DEPDC4-202ENST00000378244 SLC5A3P53794 718 aa12.39□□□□□ -0.43
DEPDC4-202ENST00000378244 SLC8A3P57103 927 aa12.39□□□□□ -0.43
DEPDC4-202ENST00000378244 CYP4F8P98187 520 aa12.39□□□□□ -0.43
DEPDC4-202ENST00000378244 ARHGAP17Q68EM7 881 aa12.39□□□□□ -0.43
DEPDC4-202ENST00000378244 PIGZQ86VD9 579 aa12.39□□□□□ -0.43
DEPDC4-202ENST00000378244 TMC8Q8IU68 726 aa12.39□□□□□ -0.43
DEPDC4-202ENST00000378244 ANKRD52Q8NB46 1076 aa12.39□□□□□ -0.43
DEPDC4-202ENST00000378244 FGF13Q92913 245 aa12.39□□□□□ -0.43
DEPDC4-202ENST00000378244 PHF7Q9BWX1 381 aaPredicted RBP12.39□□□□□ -0.43
DEPDC4-202ENST00000378244 ST7Q9NRC1 585 aa12.39□□□□□ -0.43
DEPDC4-202ENST00000378244 CHORDC1Q9UHD1 332 aaPredicted RBP12.39□□□□□ -0.43
DEPDC4-202ENST00000378244 KIAA1257Q9ULG3 409 aa12.39□□□□□ -0.43
DEPDC4-202ENST00000378244 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.39□□□□□ -0.43
DEPDC4-202ENST00000378244 ASB3Q9Y575 518 aa12.39□□□□□ -0.43
DEPDC4-202ENST00000378244 A0A1W2PQC6 194 aa12.39□□□□□ -0.43
DEPDC4-202ENST00000378244 CEBPBP17676 345 aa12.39□□□□□ -0.43
DEPDC4-202ENST00000378244 TEAD2Q15562 447 aa12.39□□□□□ -0.43
DEPDC4-202ENST00000378244 CNGA2Q16280 664 aa12.39□□□□□ -0.43
DEPDC4-202ENST00000378244 NUP93Q8N1F7 819 aa12.39□□□□□ -0.43
DEPDC4-202ENST00000378244 MYADMQ96S97 322 aa12.39□□□□□ -0.43
DEPDC4-202ENST00000378244 LRRC3Q9BY71 257 aa12.39□□□□□ -0.43
DEPDC4-202ENST00000378244 PDCL3Q9H2J4 239 aa12.39□□□□□ -0.43
DEPDC4-202ENST00000378244 CSNK1G1Q9HCP0 422 aa12.39□□□□□ -0.43
DEPDC4-202ENST00000378244 C2orf16Q68DN1 1984 aa12.39□□□□□ -0.43
DEPDC4-202ENST00000378244 CYP11B1P15538 503 aa12.38□□□□□ -0.43
DEPDC4-202ENST00000378244 KRT9P35527 623 aa12.38□□□□□ -0.43
DEPDC4-202ENST00000378244 SOX5P35711 763 aa12.38□□□□□ -0.43
DEPDC4-202ENST00000378244 BCAT1P54687 386 aa12.38□□□□□ -0.43
DEPDC4-202ENST00000378244 TAF10Q12962 218 aa12.38□□□□□ -0.43
DEPDC4-202ENST00000378244 PUS10Q3MIT2 529 aaKnown RBP12.38□□□□□ -0.43
DEPDC4-202ENST00000378244 DENND1BQ6P3S1 775 aa12.38□□□□□ -0.43
DEPDC4-202ENST00000378244 POTEHQ6S545 545 aa12.38□□□□□ -0.43
DEPDC4-202ENST00000378244 LCLAT1Q6UWP7 414 aa12.38□□□□□ -0.43
DEPDC4-202ENST00000378244 SHKBP1Q8TBC3 707 aa12.38□□□□□ -0.43
DEPDC4-202ENST00000378244 SECISBP2LQ93073 1101 aaKnown RBP12.38□□□□□ -0.43
DEPDC4-202ENST00000378244 SPATA17Q96L03 361 aa12.38□□□□□ -0.43
DEPDC4-202ENST00000378244 IL21Q9HBE4 155 aa12.38□□□□□ -0.43
DEPDC4-202ENST00000378244 LRRC53A6NM62 1247 aa12.38□□□□□ -0.43
DEPDC4-202ENST00000378244 C2CD4DB7Z1M9 353 aa12.38□□□□□ -0.43
DEPDC4-202ENST00000378244 TNFRSF10BO14763 440 aa12.38□□□□□ -0.43
DEPDC4-202ENST00000378244 STAT1P42224 750 aa12.38□□□□□ -0.43
DEPDC4-202ENST00000378244 JAM2P57087 298 aa12.38□□□□□ -0.43
DEPDC4-202ENST00000378244 BST2Q10589 180 aaKnown RBP12.38□□□□□ -0.43
DEPDC4-202ENST00000378244 TXNDC8Q6A555 127 aa12.38□□□□□ -0.43
DEPDC4-202ENST00000378244 CYP26C1Q6V0L0 522 aa12.38□□□□□ -0.43
DEPDC4-202ENST00000378244 TMEM150AQ86TG1 271 aa12.38□□□□□ -0.43
DEPDC4-202ENST00000378244 NPAS3Q8IXF0 933 aa12.38□□□□□ -0.43
DEPDC4-202ENST00000378244 NDRG1Q92597 394 aaKnown RBP12.38□□□□□ -0.43
DEPDC4-202ENST00000378244 ZSWIM3Q96MP5 696 aa12.38□□□□□ -0.43
DEPDC4-202ENST00000378244 MYH10P35580 1976 aa12.37□□□□□ -0.43
DEPDC4-202ENST00000378244 HHLA1C9JL84 531 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms