RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 PCDHGB4Q9UN71 923 aa20.46■□□□□ 0.87
PCDH8-202ENST00000377942 AP4E1Q9UPM8 1137 aa20.46■□□□□ 0.87
PCDH8-202ENST00000377942 UMODL1Q5DID0 1318 aa20.46■□□□□ 0.87
PCDH8-202ENST00000377942 HNRNPCL1O60812 293 aaKnown RBP20.46■□□□□ 0.87
PCDH8-202ENST00000377942 GHRP10912 638 aa20.46■□□□□ 0.87
PCDH8-202ENST00000377942 MAP3K7CLP57077 242 aa20.46■□□□□ 0.87
PCDH8-202ENST00000377942 POLD3Q15054 466 aaPredicted RBP20.46■□□□□ 0.87
PCDH8-202ENST00000377942 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.46■□□□□ 0.87
PCDH8-202ENST00000377942 RGMBQ6NW40 437 aa20.46■□□□□ 0.87
PCDH8-202ENST00000377942 NOA1Q8NC60 698 aaKnown RBP20.46■□□□□ 0.87
PCDH8-202ENST00000377942 TRPM4Q8TD43 1214 aa20.46■□□□□ 0.87
PCDH8-202ENST00000377942 SLC20A1Q8WUM9 679 aa20.46■□□□□ 0.87
PCDH8-202ENST00000377942 CCDC138Q96M89 665 aa20.46■□□□□ 0.87
PCDH8-202ENST00000377942 NCAM2O15394 837 aa20.45■□□□□ 0.86
PCDH8-202ENST00000377942 PTRHD1Q6GMV3 140 aaKnown RBP20.45■□□□□ 0.86
PCDH8-202ENST00000377942 KCNK18Q7Z418 384 aa20.45■□□□□ 0.86
PCDH8-202ENST00000377942 MIB1Q86YT6 1006 aa20.45■□□□□ 0.86
PCDH8-202ENST00000377942 CASTOR2A6NHX0 329 aa20.45■□□□□ 0.86
PCDH8-202ENST00000377942 CTCFP49711 727 aaPredicted RBP20.45■□□□□ 0.86
PCDH8-202ENST00000377942 TKTL1P51854 596 aa20.45■□□□□ 0.86
PCDH8-202ENST00000377942 PTGISQ16647 500 aa20.45■□□□□ 0.86
PCDH8-202ENST00000377942 MCOLN2Q8IZK6 566 aa20.45■□□□□ 0.86
PCDH8-202ENST00000377942 HNRNPLLQ8WVV9 542 aaKnown RBP20.45■□□□□ 0.86
PCDH8-202ENST00000377942 ENTPD7Q9NQZ7 604 aa20.45■□□□□ 0.86
PCDH8-202ENST00000377942 LATS2Q9NRM7 1088 aa20.45■□□□□ 0.86
PCDH8-202ENST00000377942 MROH7Q68CQ1 1323 aa20.45■□□□□ 0.86
PCDH8-202ENST00000377942 GOLGA8RI6L899 631 aa20.45■□□□□ 0.86
PCDH8-202ENST00000377942 CKMP06732 381 aa20.45■□□□□ 0.86
PCDH8-202ENST00000377942 SERPINB4P48594 390 aa20.45■□□□□ 0.86
PCDH8-202ENST00000377942 NDST1P52848 882 aa20.45■□□□□ 0.86
PCDH8-202ENST00000377942 ABCE1P61221 599 aaKnown RBP20.45■□□□□ 0.86
PCDH8-202ENST00000377942 MAP2K5Q13163 448 aa20.45■□□□□ 0.86
PCDH8-202ENST00000377942 E2F5Q15329 346 aa20.45■□□□□ 0.86
PCDH8-202ENST00000377942 MTFR1Q15390 333 aa20.45■□□□□ 0.86
PCDH8-202ENST00000377942 PACSIN1Q9BY11 444 aa20.45■□□□□ 0.86
PCDH8-202ENST00000377942 CAPN6Q9Y6Q1 641 aa20.45■□□□□ 0.86
PCDH8-202ENST00000377942 STX7O15400 261 aaKnown RBP20.45■□□□□ 0.86
PCDH8-202ENST00000377942 SPATA21Q7Z572 469 aa20.45■□□□□ 0.86
PCDH8-202ENST00000377942 FZD1Q9UP38 647 aa20.45■□□□□ 0.86
PCDH8-202ENST00000377942 TFR2Q9UP52 801 aa20.45■□□□□ 0.86
PCDH8-202ENST00000377942 PCDHAC2Q9Y5I4 1007 aa20.45■□□□□ 0.86
PCDH8-202ENST00000377942 LACTBL1A8MY62 500 aa20.44■□□□□ 0.86
PCDH8-202ENST00000377942 RAG1P15918 1043 aa20.44■□□□□ 0.86
PCDH8-202ENST00000377942 SPOCD1Q6ZMY3 1216 aa20.44■□□□□ 0.86
PCDH8-202ENST00000377942 L2HGDHQ9H9P8 463 aa20.44■□□□□ 0.86
PCDH8-202ENST00000377942 ARL2BPQ9Y2Y0 163 aa20.44■□□□□ 0.86
PCDH8-202ENST00000377942 KDM4CQ9H3R0 1056 aa20.44■□□□□ 0.86
PCDH8-202ENST00000377942 TASP1Q9H6P5 420 aa20.44■□□□□ 0.86
PCDH8-202ENST00000377942 TSPAN16Q9UKR8 245 aa20.44■□□□□ 0.86
PCDH8-202ENST00000377942 SHPRHQ149N8 1683 aa20.44■□□□□ 0.86
PCDH8-202ENST00000377942 PHEXP78562 749 aa20.44■□□□□ 0.86
PCDH8-202ENST00000377942 GTF2BQ00403 316 aa20.44■□□□□ 0.86
PCDH8-202ENST00000377942 CCNG2Q16589 344 aa20.44■□□□□ 0.86
PCDH8-202ENST00000377942 SUDS3Q9H7L9 328 aaPredicted RBP20.44■□□□□ 0.86
PCDH8-202ENST00000377942 WHRNQ9P202 907 aa20.44■□□□□ 0.86
PCDH8-202ENST00000377942 IFT172Q9UG01 1749 aa20.44■□□□□ 0.86
PCDH8-202ENST00000377942 SPATA31C2B4DYI2 1134 aa20.44■□□□□ 0.86
PCDH8-202ENST00000377942 TLR8Q9NR97 1041 aaKnown RBP20.44■□□□□ 0.86
PCDH8-202ENST00000377942 TRIM17Q9Y577 477 aa20.44■□□□□ 0.86
PCDH8-202ENST00000377942 MGEA5O60502 916 aa20.43■□□□□ 0.86
PCDH8-202ENST00000377942 SFSWAPQ12872 951 aaKnown RBP20.43■□□□□ 0.86
PCDH8-202ENST00000377942 CAPRIN1Q14444 709 aaKnown RBP20.43■□□□□ 0.86
PCDH8-202ENST00000377942 GRAMD1BQ3KR37 738 aa20.43■□□□□ 0.86
PCDH8-202ENST00000377942 LACRTQ9GZZ8 138 aa20.43■□□□□ 0.86
PCDH8-202ENST00000377942 TMEM150BA6NC51 233 aa20.43■□□□□ 0.86
PCDH8-202ENST00000377942 MYL2P10916 166 aa20.43■□□□□ 0.86
PCDH8-202ENST00000377942 DDX42Q86XP3 938 aaKnown RBP eCLIP20.43■□□□□ 0.86
PCDH8-202ENST00000377942 UNC45BQ8IWX7 931 aa20.43■□□□□ 0.86
PCDH8-202ENST00000377942 TMEM86AQ8N2M4 240 aa20.43■□□□□ 0.86
PCDH8-202ENST00000377942 SERPINB12Q96P63 405 aa20.43■□□□□ 0.86
PCDH8-202ENST00000377942 TNFSF13BQ9Y275 285 aa20.43■□□□□ 0.86
PCDH8-202ENST00000377942 SLC12A8A0AV02 714 aa20.43■□□□□ 0.86
PCDH8-202ENST00000377942 LRRIQ3A6PVS8 624 aaPredicted RBP20.43■□□□□ 0.86
PCDH8-202ENST00000377942 TCP11X1B4DZS4 312 aa20.43■□□□□ 0.86
PCDH8-202ENST00000377942 GEMIN4P57678 1058 aaKnown RBP20.43■□□□□ 0.86
PCDH8-202ENST00000377942 NOGQ13253 232 aa20.43■□□□□ 0.86
PCDH8-202ENST00000377942 MEI1Q5TIA1 1274 aa20.43■□□□□ 0.86
PCDH8-202ENST00000377942 ACSF2Q96CM8 615 aaPredicted RBP20.43■□□□□ 0.86
PCDH8-202ENST00000377942 ZCCHC17Q9NP64 241 aaKnown RBP20.43■□□□□ 0.86
PCDH8-202ENST00000377942 AVENQ9NQS1 362 aaPredicted RBP20.43■□□□□ 0.86
PCDH8-202ENST00000377942 CFAP73A6NFT4 308 aa20.43■□□□□ 0.86
PCDH8-202ENST00000377942 LRRC10BA6NIK2 292 aa20.43■□□□□ 0.86
PCDH8-202ENST00000377942 TBKBP1A7MCY6 615 aa20.43■□□□□ 0.86
PCDH8-202ENST00000377942 MAFO75444 373 aaPredicted RBP20.43■□□□□ 0.86
PCDH8-202ENST00000377942 POMCP01189 267 aa20.43■□□□□ 0.86
PCDH8-202ENST00000377942 KRT4P19013 534 aa20.43■□□□□ 0.86
PCDH8-202ENST00000377942 OTUD4Q01804 1114 aaKnown RBP20.43■□□□□ 0.86
PCDH8-202ENST00000377942 RASIP1Q5U651 963 aa20.43■□□□□ 0.86
PCDH8-202ENST00000377942 SMARCD1Q96GM5 515 aa20.43■□□□□ 0.86
PCDH8-202ENST00000377942 ASPSCR1Q9BZE9 553 aa20.43■□□□□ 0.86
PCDH8-202ENST00000377942 PCMTD2Q9NV79 361 aa20.43■□□□□ 0.86
PCDH8-202ENST00000377942 SMIM22K7EJ46 135 aa20.42■□□□□ 0.86
PCDH8-202ENST00000377942 PAX3P23760 479 aa20.42■□□□□ 0.86
PCDH8-202ENST00000377942 AKAP5P24588 427 aa20.42■□□□□ 0.86
PCDH8-202ENST00000377942 OXCT1P55809 520 aa20.42■□□□□ 0.86
PCDH8-202ENST00000377942 PTK2BQ14289 1009 aa20.42■□□□□ 0.86
PCDH8-202ENST00000377942 C1orf146Q5VVC0 180 aa20.42■□□□□ 0.86
PCDH8-202ENST00000377942 HERC6Q8IVU3 1022 aa20.42■□□□□ 0.86
PCDH8-202ENST00000377942 PGBD3Q8N328 593 aa20.42■□□□□ 0.86
PCDH8-202ENST00000377942 ROBO3Q96MS0 1386 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms