RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 PPP1R2P3Q6NXS1 205 aa17.01■□□□□ 0.31
TRIM27-202ENST00000377199 DRICH1Q6PGQ1 229 aaPredicted RBP17.01■□□□□ 0.31
TRIM27-202ENST00000377199 CEP128Q6ZU80 1094 aa17.01■□□□□ 0.31
TRIM27-202ENST00000377199 CTAGE3PQ8IX95 158 aa17.01■□□□□ 0.31
TRIM27-202ENST00000377199 PDIK1LQ8N165 341 aa17.01■□□□□ 0.31
TRIM27-202ENST00000377199 ATP11CQ8NB49 1132 aa17.01■□□□□ 0.31
TRIM27-202ENST00000377199 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.01■□□□□ 0.314e-12■■■■□ 24.1
TRIM27-202ENST00000377199 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.01■□□□□ 0.31
TRIM27-202ENST00000377199 NSMCE1Q8WV22 266 aa17.01■□□□□ 0.31
TRIM27-202ENST00000377199 CFAP36Q96G28 342 aa17.01■□□□□ 0.31
TRIM27-202ENST00000377199 RNPEPQ9H4A4 650 aa17.01■□□□□ 0.31
TRIM27-202ENST00000377199 ADM5C9JUS6 153 aa17.01■□□□□ 0.31
TRIM27-202ENST00000377199 DIAPH2O60879 1101 aa17.01■□□□□ 0.31
TRIM27-202ENST00000377199 ELK3P41970 407 aa17.01■□□□□ 0.31
TRIM27-202ENST00000377199 PTPN11Q06124 597 aaPredicted RBP17.01■□□□□ 0.31
TRIM27-202ENST00000377199 OTOAQ7RTW8 1153 aa17.01■□□□□ 0.31
TRIM27-202ENST00000377199 SLC4A11Q8NBS3 891 aa17.01■□□□□ 0.31
TRIM27-202ENST00000377199 DENND1AQ8TEH3 1009 aa17.01■□□□□ 0.31
TRIM27-202ENST00000377199 TTC17Q96AE7 1141 aa17.01■□□□□ 0.31
TRIM27-202ENST00000377199 CLMNQ96JQ2 1002 aa17.01■□□□□ 0.31
TRIM27-202ENST00000377199 MYCBPQ99417 103 aaPredicted RBP17.01■□□□□ 0.31
TRIM27-202ENST00000377199 AKT3Q9Y243 479 aa17.01■□□□□ 0.31
TRIM27-202ENST00000377199 PARP14Q460N5 1801 aa17.01■□□□□ 0.31
TRIM27-202ENST00000377199 CEP350Q5VT06 3117 aa17.01■□□□□ 0.31
TRIM27-202ENST00000377199 FZD9O00144 591 aa17.01■□□□□ 0.31
TRIM27-202ENST00000377199 ACKR2O00590 384 aa17.01■□□□□ 0.31
TRIM27-202ENST00000377199 MED7O43513 233 aa17.01■□□□□ 0.31
TRIM27-202ENST00000377199 FAM155BO75949 473 aa17.01■□□□□ 0.31
TRIM27-202ENST00000377199 STAG3L1P0CL83 205 aa17.01■□□□□ 0.31
TRIM27-202ENST00000377199 PHBP35232 272 aa17.01■□□□□ 0.31
TRIM27-202ENST00000377199 TAP1Q03518 808 aa17.01■□□□□ 0.31
TRIM27-202ENST00000377199 TTLL12Q14166 644 aaPredicted RBP17.01■□□□□ 0.31
TRIM27-202ENST00000377199 ZNF75CPQ92670 426 aaPredicted RBP17.01■□□□□ 0.31
TRIM27-202ENST00000377199 PEBP4Q96S96 227 aa17.01■□□□□ 0.31
TRIM27-202ENST00000377199 FOXP3Q9BZS1 431 aa17.01■□□□□ 0.31
TRIM27-202ENST00000377199 TXNRD2Q9NNW7 524 aa17.01■□□□□ 0.31
TRIM27-202ENST00000377199 NGRNQ9NPE2 291 aaKnown RBP17.01■□□□□ 0.31
TRIM27-202ENST00000377199 MCM8Q9UJA3 840 aa17.01■□□□□ 0.31
TRIM27-202ENST00000377199 PCDHGC3Q9UN70 934 aa17.01■□□□□ 0.31
TRIM27-202ENST00000377199 FARP1Q9Y4F1 1045 aaPredicted RBP17.01■□□□□ 0.31
TRIM27-202ENST00000377199 CSADQ9Y600 493 aa17.01■□□□□ 0.31
TRIM27-202ENST00000377199 IKBKGQ9Y6K9 419 aa17.01■□□□□ 0.31
TRIM27-202ENST00000377199 A0A087WZ62 844 aa17■□□□□ 0.31
TRIM27-202ENST00000377199 UNC5CO95185 931 aa17■□□□□ 0.31
TRIM27-202ENST00000377199 TXNP10599 105 aaKnown RBP17■□□□□ 0.31
TRIM27-202ENST00000377199 NR1H3Q13133 447 aa17■□□□□ 0.31
TRIM27-202ENST00000377199 ZNF268Q14587 947 aaPredicted RBP17■□□□□ 0.31
TRIM27-202ENST00000377199 PDK4Q16654 411 aa17■□□□□ 0.31
TRIM27-202ENST00000377199 Q3C1V9 767 aa17■□□□□ 0.31
TRIM27-202ENST00000377199 FDXACB1Q9BRP7 624 aaPredicted RBP17■□□□□ 0.31
TRIM27-202ENST00000377199 SMG5Q9UPR3 1016 aaKnown RBP17■□□□□ 0.31
TRIM27-202ENST00000377199 C2orf71A6NGG8 1288 aa17■□□□□ 0.31
TRIM27-202ENST00000377199 H0Y3Z8 333 aa17■□□□□ 0.31
TRIM27-202ENST00000377199 PDGFRAP16234 1089 aa17■□□□□ 0.31
TRIM27-202ENST00000377199 TAF1BQ53T94 588 aaPredicted RBP17■□□□□ 0.31
TRIM27-202ENST00000377199 PPP6R3Q5H9R7 873 aaPredicted RBP17■□□□□ 0.31
TRIM27-202ENST00000377199 WLSQ5T9L3 541 aa17■□□□□ 0.31
TRIM27-202ENST00000377199 RNF43Q68DV7 783 aa17■□□□□ 0.31
TRIM27-202ENST00000377199 BBS12Q6ZW61 710 aa17■□□□□ 0.31
TRIM27-202ENST00000377199 RIOX2Q8IUF8 465 aa17■□□□□ 0.31
TRIM27-202ENST00000377199 NAT8LQ8N9F0 302 aa17■□□□□ 0.31
TRIM27-202ENST00000377199 PLCD4Q9BRC7 762 aa17■□□□□ 0.31
TRIM27-202ENST00000377199 TRIM56Q9BRZ2 755 aaKnown RBP17■□□□□ 0.31
TRIM27-202ENST00000377199 CXorf56Q9H5V9 222 aa17■□□□□ 0.31
TRIM27-202ENST00000377199 FAM49BQ9NUQ9 324 aa17■□□□□ 0.31
TRIM27-202ENST00000377199 KBTBD13C9JR72 458 aa16.99■□□□□ 0.31
TRIM27-202ENST00000377199 E5RJQ4 531 aa16.99■□□□□ 0.31
TRIM27-202ENST00000377199 TYROBPO43914 113 aa16.99■□□□□ 0.31
TRIM27-202ENST00000377199 EDF1O60869 148 aaKnown RBP16.99■□□□□ 0.31
TRIM27-202ENST00000377199 CDCA2Q69YH5 1023 aaPredicted RBP16.99■□□□□ 0.31
TRIM27-202ENST00000377199 MTDHQ86UE4 582 aaKnown RBP16.99■□□□□ 0.31
TRIM27-202ENST00000377199 FAF2Q96CS3 445 aa16.99■□□□□ 0.31
TRIM27-202ENST00000377199 TMEM176AQ96HP8 235 aa16.99■□□□□ 0.31
TRIM27-202ENST00000377199 FAM167AQ96KS9 214 aa16.99■□□□□ 0.31
TRIM27-202ENST00000377199 ARHGEF3Q9NR81 526 aa16.99■□□□□ 0.31
TRIM27-202ENST00000377199 RAB6BQ9NRW1 208 aa16.99■□□□□ 0.31
TRIM27-202ENST00000377199 USH1CQ9Y6N9 552 aa16.99■□□□□ 0.31
TRIM27-202ENST00000377199 PRPF4O43172 522 aaKnown RBP eCLIP16.99■□□□□ 0.31
TRIM27-202ENST00000377199 CLNS1AP54105 237 aaKnown RBP16.99■□□□□ 0.31
TRIM27-202ENST00000377199 KRT81Q14533 505 aa16.99■□□□□ 0.31
TRIM27-202ENST00000377199 NAA25Q14CX7 972 aa16.99■□□□□ 0.31
TRIM27-202ENST00000377199 KBTBD12Q3ZCT8 623 aa16.99■□□□□ 0.31
TRIM27-202ENST00000377199 MAP1SQ66K74 1059 aaPredicted RBP16.99■□□□□ 0.31
TRIM27-202ENST00000377199 TSHZ1Q6ZSZ6 1077 aa16.99■□□□□ 0.31
TRIM27-202ENST00000377199 LRRC6Q86X45 466 aa16.99■□□□□ 0.31
TRIM27-202ENST00000377199 STARD13Q9Y3M8 1113 aa16.99■□□□□ 0.31
TRIM27-202ENST00000377199 ELF1P32519 619 aa16.98■□□□□ 0.31
TRIM27-202ENST00000377199 ROR1Q01973 937 aa16.98■□□□□ 0.31
TRIM27-202ENST00000377199 DPYSL3Q14195 570 aa16.98■□□□□ 0.31
TRIM27-202ENST00000377199 ZC3H12AQ5D1E8 599 aaKnown RBP16.98■□□□□ 0.31
TRIM27-202ENST00000377199 CELF3Q5SZQ8 465 aaKnown RBP16.98■□□□□ 0.31
TRIM27-202ENST00000377199 POLNQ7Z5Q5 900 aa16.98■□□□□ 0.31
TRIM27-202ENST00000377199 NIPA2Q8N8Q9 360 aa16.98■□□□□ 0.31
TRIM27-202ENST00000377199 RFWD2Q8NHY2 731 aa16.98■□□□□ 0.31
TRIM27-202ENST00000377199 RXFP2Q8WXD0 754 aa16.98■□□□□ 0.31
TRIM27-202ENST00000377199 PTPRN2Q92932 1015 aa16.98■□□□□ 0.31
TRIM27-202ENST00000377199 GRAMD1AQ96CP6 724 aa16.98■□□□□ 0.31
TRIM27-202ENST00000377199 FAM111AQ96PZ2 611 aa16.98■□□□□ 0.31
TRIM27-202ENST00000377199 MIS12Q9H081 205 aa16.98■□□□□ 0.31
TRIM27-202ENST00000377199 GPRC5DQ9NZD1 345 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms