RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 CDCA5Q96FF9 252 aa10.07□□□□□ -0.8
TRIM39-202ENST00000376659 TMEM176AQ96HP8 235 aa10.07□□□□□ -0.8
TRIM39-202ENST00000376659 TTC25Q96NG3 672 aa10.07□□□□□ -0.8
TRIM39-202ENST00000376659 CXorf56Q9H5V9 222 aa10.07□□□□□ -0.8
TRIM39-202ENST00000376659 USTQ9Y2C2 406 aa10.07□□□□□ -0.8
TRIM39-202ENST00000376659 STARD13Q9Y3M8 1113 aa10.07□□□□□ -0.8
TRIM39-202ENST00000376659 A0A1W2PPM1 405 aa10.07□□□□□ -0.8
TRIM39-202ENST00000376659 HMGCRP04035 888 aa10.07□□□□□ -0.8
TRIM39-202ENST00000376659 TSHRP16473 764 aa10.07□□□□□ -0.8
TRIM39-202ENST00000376659 MIPP30301 263 aa10.07□□□□□ -0.8
TRIM39-202ENST00000376659 MKRN3Q13064 507 aaKnown RBP10.07□□□□□ -0.8
TRIM39-202ENST00000376659 GPS1Q13098 491 aa10.07□□□□□ -0.8
TRIM39-202ENST00000376659 PDK4Q16654 411 aa10.07□□□□□ -0.8
TRIM39-202ENST00000376659 SMTNL2Q2TAL5 461 aa10.07□□□□□ -0.8
TRIM39-202ENST00000376659 ARTNQ5T4W7 220 aa10.07□□□□□ -0.8
TRIM39-202ENST00000376659 EMC1Q8N766 993 aa10.07□□□□□ -0.8
TRIM39-202ENST00000376659 ACTL9Q8TC94 416 aa10.07□□□□□ -0.8
TRIM39-202ENST00000376659 AFG1LQ8WV93 481 aa10.07□□□□□ -0.8
TRIM39-202ENST00000376659 ELAC2Q9BQ52 826 aaKnown RBP10.07□□□□□ -0.8
TRIM39-202ENST00000376659 SMARCAD1Q9H4L7 1026 aa10.07□□□□□ -0.8
TRIM39-202ENST00000376659 CYP3A43Q9HB55 503 aa10.07□□□□□ -0.8
TRIM39-202ENST00000376659 SLC24A2Q9UI40 661 aa10.07□□□□□ -0.8
TRIM39-202ENST00000376659 KAT6AQ92794 2004 aa10.06□□□□□ -0.8
TRIM39-202ENST00000376659 A0A1B0GUA9 196 aa10.06□□□□□ -0.8
TRIM39-202ENST00000376659 GPR32O75388 356 aa10.06□□□□□ -0.8
TRIM39-202ENST00000376659 UBOX5O94941 541 aa10.06□□□□□ -0.8
TRIM39-202ENST00000376659 ITGB3P05106 788 aa10.06□□□□□ -0.8
TRIM39-202ENST00000376659 HARSP12081 509 aaKnown RBP10.06□□□□□ -0.8
TRIM39-202ENST00000376659 BRAFP15056 766 aa10.06□□□□□ -0.8
TRIM39-202ENST00000376659 VPS41P49754 854 aa10.06□□□□□ -0.8
TRIM39-202ENST00000376659 CCDC14Q49A88 953 aa10.06□□□□□ -0.8
TRIM39-202ENST00000376659 KCNT1Q5JUK3 1230 aa10.06□□□□□ -0.8
TRIM39-202ENST00000376659 ZNF484Q5JVG2 852 aa10.06□□□□□ -0.8
TRIM39-202ENST00000376659 SPDYAQ5MJ70 313 aa10.06□□□□□ -0.8
TRIM39-202ENST00000376659 FAM183BPQ6ZVS7 135 aa10.06□□□□□ -0.8
TRIM39-202ENST00000376659 EEPD1Q7L9B9 569 aa10.06□□□□□ -0.8
TRIM39-202ENST00000376659 ZNF467Q7Z7K2 595 aaPredicted RBP10.06□□□□□ -0.8
TRIM39-202ENST00000376659 TTC30AQ86WT1 665 aa10.06□□□□□ -0.8
TRIM39-202ENST00000376659 ERICH1Q86X53 443 aa10.06□□□□□ -0.8
TRIM39-202ENST00000376659 BANPQ8N9N5 519 aa10.06□□□□□ -0.8
TRIM39-202ENST00000376659 ZMAT2Q96NC0 199 aaKnown RBP10.06□□□□□ -0.8
TRIM39-202ENST00000376659 SLC4A5Q9BY07 1137 aa10.06□□□□□ -0.8
TRIM39-202ENST00000376659 ASB7Q9H672 318 aa10.06□□□□□ -0.8
TRIM39-202ENST00000376659 ACSS3Q9H6R3 686 aa10.06□□□□□ -0.8
TRIM39-202ENST00000376659 MTMR10Q9NXD2 777 aa10.06□□□□□ -0.8
TRIM39-202ENST00000376659 PNMA3Q9UL41 463 aa10.06□□□□□ -0.8
TRIM39-202ENST00000376659 C2CD2Q9Y426 696 aa10.06□□□□□ -0.8
TRIM39-202ENST00000376659 GREB1Q4ZG55 1949 aa10.06□□□□□ -0.8
TRIM39-202ENST00000376659 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.06□□□□□ -0.8
TRIM39-202ENST00000376659 SNAI1O95863 264 aaPredicted RBP10.06□□□□□ -0.8
TRIM39-202ENST00000376659 IL1BP01584 269 aa10.06□□□□□ -0.8
TRIM39-202ENST00000376659 T-ENOLP0DO92 83 aa10.06□□□□□ -0.8
TRIM39-202ENST00000376659 RPA3P35244 121 aaPredicted RBP10.06□□□□□ -0.8
TRIM39-202ENST00000376659 CTCFP49711 727 aaPredicted RBP10.06□□□□□ -0.8
TRIM39-202ENST00000376659 ADAM17P78536 824 aa10.06□□□□□ -0.8
TRIM39-202ENST00000376659 PRKG1Q13976 671 aa10.06□□□□□ -0.8
TRIM39-202ENST00000376659 PLEKHG4Q58EX7 1191 aa10.06□□□□□ -0.8
TRIM39-202ENST00000376659 XKR4Q5GH76 650 aa10.06□□□□□ -0.8
TRIM39-202ENST00000376659 GJC2Q5T442 439 aaPredicted RBP10.06□□□□□ -0.8
TRIM39-202ENST00000376659 TLDC1Q6P9B6 456 aa10.06□□□□□ -0.8
TRIM39-202ENST00000376659 MTHFD1LQ6UB35 978 aa10.06□□□□□ -0.8
TRIM39-202ENST00000376659 CCDC121Q6ZUS5 278 aa10.06□□□□□ -0.8
TRIM39-202ENST00000376659 ZBTB8OSQ8IWT0 167 aa10.06□□□□□ -0.8
TRIM39-202ENST00000376659 PPIL6Q8IXY8 311 aa10.06□□□□□ -0.8
TRIM39-202ENST00000376659 OTUD5Q96G74 571 aa10.06□□□□□ -0.8
TRIM39-202ENST00000376659 CPB2Q96IY4 423 aa10.06□□□□□ -0.8
TRIM39-202ENST00000376659 MS4A4AQ96JQ5 239 aa10.06□□□□□ -0.8
TRIM39-202ENST00000376659 MMP19Q99542 508 aa10.06□□□□□ -0.8
TRIM39-202ENST00000376659 MROH8Q9H579 483 aa10.06□□□□□ -0.8
TRIM39-202ENST00000376659 SAYSD1Q9NPB0 183 aa10.06□□□□□ -0.8
TRIM39-202ENST00000376659 PRMT7Q9NVM4 692 aaPredicted RBP10.06□□□□□ -0.8
TRIM39-202ENST00000376659 ITGA11Q9UKX5 1188 aa10.06□□□□□ -0.8
TRIM39-202ENST00000376659 TTLL3Q9Y4R7 772 aa10.06□□□□□ -0.8
TRIM39-202ENST00000376659 FAM47DPA6NHR8 397 aa10.06□□□□□ -0.8
TRIM39-202ENST00000376659 PPEF2O14830 753 aa10.06□□□□□ -0.8
TRIM39-202ENST00000376659 SKIV2L2P42285 1042 aaKnown RBP10.06□□□□□ -0.8
TRIM39-202ENST00000376659 IFNAR2P48551 515 aa10.06□□□□□ -0.8
TRIM39-202ENST00000376659 KAZNQ674X7 775 aa10.06□□□□□ -0.8
TRIM39-202ENST00000376659 GADL1Q6ZQY3 521 aa10.06□□□□□ -0.8
TRIM39-202ENST00000376659 ARMCX2Q7L311 632 aa10.06□□□□□ -0.8
TRIM39-202ENST00000376659 CCDC125Q86Z20 511 aa10.06□□□□□ -0.8
TRIM39-202ENST00000376659 ANKRD36BP1Q96IX9 119 aa10.06□□□□□ -0.8
TRIM39-202ENST00000376659 PPCSQ9HAB8 311 aa10.06□□□□□ -0.8
TRIM39-202ENST00000376659 RXFP1Q9HBX9 757 aa10.06□□□□□ -0.8
TRIM39-202ENST00000376659 KIAA0754O94854 1291 aa10.05□□□□□ -0.8
TRIM39-202ENST00000376659 KRT3P12035 628 aa10.05□□□□□ -0.8
TRIM39-202ENST00000376659 ATP5DP30049 168 aa10.05□□□□□ -0.8
TRIM39-202ENST00000376659 TFAMQ00059 246 aaKnown RBP10.05□□□□□ -0.8
TRIM39-202ENST00000376659 MMRN1Q13201 1228 aa10.05□□□□□ -0.8
TRIM39-202ENST00000376659 BIRC2Q13490 618 aa10.05□□□□□ -0.8
TRIM39-202ENST00000376659 NPNTQ6UXI9 565 aa10.05□□□□□ -0.8
TRIM39-202ENST00000376659 SPATA21Q7Z572 469 aa10.05□□□□□ -0.8
TRIM39-202ENST00000376659 CPLX4Q7Z7G2 160 aa10.05□□□□□ -0.8
TRIM39-202ENST00000376659 KBTBD7Q8WVZ9 684 aa10.05□□□□□ -0.8
TRIM39-202ENST00000376659 OPTNQ96CV9 577 aa10.05□□□□□ -0.8
TRIM39-202ENST00000376659 SNX27Q96L92 541 aa10.05□□□□□ -0.8
TRIM39-202ENST00000376659 TGS1Q96RS0 853 aaKnown RBP10.05□□□□□ -0.8
TRIM39-202ENST00000376659 CD248Q9HCU0 757 aa10.05□□□□□ -0.8
TRIM39-202ENST00000376659 WDR35Q9P2L0 1181 aa10.05□□□□□ -0.8
TRIM39-202ENST00000376659 MYO16Q9Y6X6 1858 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms