RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 PTPN12Q05209 780 aaKnown RBP12.91□□□□□ -0.34
VPS13A-204ENST00000376634 GTF3C2Q8WUA4 911 aaPredicted RBP12.91□□□□□ -0.34
VPS13A-204ENST00000376634 PIGBQ92521 554 aa12.91□□□□□ -0.34
VPS13A-204ENST00000376634 ASCC3Q8N3C0 2202 aaKnown RBP12.91□□□□□ -0.34
VPS13A-204ENST00000376634 IFNA14P01570 189 aa12.91□□□□□ -0.34
VPS13A-204ENST00000376634 GRK4P32298 578 aa12.91□□□□□ -0.34
VPS13A-204ENST00000376634 AVPR1AP37288 418 aa12.91□□□□□ -0.34
VPS13A-204ENST00000376634 NECTIN1Q15223 517 aa12.91□□□□□ -0.34
VPS13A-204ENST00000376634 TSNQ15631 228 aaKnown RBP12.91□□□□□ -0.34
VPS13A-204ENST00000376634 DGKDQ16760 1214 aa12.91□□□□□ -0.34
VPS13A-204ENST00000376634 SERAC1Q96JX3 654 aa12.91□□□□□ -0.34
VPS13A-204ENST00000376634 CPVLQ9H3G5 476 aa12.91□□□□□ -0.34
VPS13A-204ENST00000376634 IPPQ9Y573 584 aa12.91□□□□□ -0.34
VPS13A-204ENST00000376634 MGAT4DA6NG13 374 aa12.91□□□□□ -0.34
VPS13A-204ENST00000376634 C6orf222P0C671 652 aaPredicted RBP12.91□□□□□ -0.34
VPS13A-204ENST00000376634 PCNAP12004 261 aa12.91□□□□□ -0.34
VPS13A-204ENST00000376634 SERPINB5P36952 375 aa12.91□□□□□ -0.34
VPS13A-204ENST00000376634 HMGCS2P54868 508 aa12.91□□□□□ -0.34
VPS13A-204ENST00000376634 STX5Q13190 355 aa12.91□□□□□ -0.34
VPS13A-204ENST00000376634 IKBIPQ70UQ0 350 aa12.91□□□□□ -0.34
VPS13A-204ENST00000376634 ZNF614Q8N883 585 aa12.91□□□□□ -0.34
VPS13A-204ENST00000376634 FAM153AQ9UHL3 310 aa12.91□□□□□ -0.34
VPS13A-204ENST00000376634 SNX8Q9Y5X2 465 aa12.91□□□□□ -0.34
VPS13A-204ENST00000376634 LRRC7Q96NW7 1537 aa12.91□□□□□ -0.34
VPS13A-204ENST00000376634 SF3B1O75533 1304 aaKnown RBP eCLIP12.91□□□□□ -0.344e-6■■■■■ 80.4
VPS13A-204ENST00000376634 POLRMTO00411 1230 aaKnown RBP12.91□□□□□ -0.34
VPS13A-204ENST00000376634 ZNF682O95780 498 aa12.91□□□□□ -0.34
VPS13A-204ENST00000376634 AKR1B1P15121 316 aa12.91□□□□□ -0.34
VPS13A-204ENST00000376634 MROH9Q5TGP6 573 aa12.91□□□□□ -0.34
VPS13A-204ENST00000376634 IRAK1BP1Q5VVH5 260 aa12.91□□□□□ -0.34
VPS13A-204ENST00000376634 HIC2Q96JB3 615 aa12.91□□□□□ -0.34
VPS13A-204ENST00000376634 POLD4Q9HCU8 107 aa12.91□□□□□ -0.34
VPS13A-204ENST00000376634 GALNT8Q9NY28 637 aa12.91□□□□□ -0.34
VPS13A-204ENST00000376634 ERVK-7P63135 1459 aa12.91□□□□□ -0.34
VPS13A-204ENST00000376634 KRT6BP04259 564 aa12.91□□□□□ -0.34
VPS13A-204ENST00000376634 GYS1P13807 737 aa12.91□□□□□ -0.34
VPS13A-204ENST00000376634 FDFT1P37268 417 aa12.91□□□□□ -0.34
VPS13A-204ENST00000376634 KRT6CP48668 564 aa12.91□□□□□ -0.34
VPS13A-204ENST00000376634 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.91□□□□□ -0.34
VPS13A-204ENST00000376634 HEATR4Q86WZ0 1026 aa12.91□□□□□ -0.34
VPS13A-204ENST00000376634 ENTPD7Q9NQZ7 604 aa12.91□□□□□ -0.34
VPS13A-204ENST00000376634 SHROOM3Q8TF72 1996 aa12.91□□□□□ -0.34
VPS13A-204ENST00000376634 PHF20L1A8MW92 1017 aa12.91□□□□□ -0.34
VPS13A-204ENST00000376634 FCGR1AP12314 374 aa12.91□□□□□ -0.34
VPS13A-204ENST00000376634 ACADSP16219 412 aa12.91□□□□□ -0.34
VPS13A-204ENST00000376634 PLCL1Q15111 1095 aa12.91□□□□□ -0.34
VPS13A-204ENST00000376634 TEX13BQ9BXU2 312 aa12.91□□□□□ -0.34
VPS13A-204ENST00000376634 ABI2Q9NYB9 513 aaPredicted RBP12.91□□□□□ -0.34
VPS13A-204ENST00000376634 OVOS2A0A0G2JMS6 1433 aa12.9□□□□□ -0.34
VPS13A-204ENST00000376634 OVOS2A0A0J9YW53 1432 aa12.9□□□□□ -0.34
VPS13A-204ENST00000376634 OVOS2Q6IE36 1432 aa12.9□□□□□ -0.34
VPS13A-204ENST00000376634 FAM196BA6NMK8 535 aa12.9□□□□□ -0.34
VPS13A-204ENST00000376634 P4HA2O15460 535 aa12.9□□□□□ -0.34
VPS13A-204ENST00000376634 SYNCRIPO60506 623 aaKnown RBP12.9□□□□□ -0.34
VPS13A-204ENST00000376634 LARGE1O95461 756 aa12.9□□□□□ -0.34
VPS13A-204ENST00000376634 CHRNB3Q05901 458 aa12.9□□□□□ -0.34
VPS13A-204ENST00000376634 TMEM62Q0P6H9 643 aa12.9□□□□□ -0.34
VPS13A-204ENST00000376634 MGAT5BQ3V5L5 792 aa12.9□□□□□ -0.34
VPS13A-204ENST00000376634 ATF7IP2Q5U623 682 aa12.9□□□□□ -0.34
VPS13A-204ENST00000376634 LRRC39Q96DD0 335 aa12.9□□□□□ -0.34
VPS13A-204ENST00000376634 ADAM33Q9BZ11 813 aa12.9□□□□□ -0.34
VPS13A-204ENST00000376634 FRMD8Q9BZ67 464 aaPredicted RBP12.9□□□□□ -0.34
VPS13A-204ENST00000376634 MINPP1Q9UNW1 487 aa12.9□□□□□ -0.34
VPS13A-204ENST00000376634 E9PCH4 1651 aa12.9□□□□□ -0.34
VPS13A-204ENST00000376634 CPSF1Q10570 1443 aaKnown RBP12.9□□□□□ -0.34
VPS13A-204ENST00000376634 SNPHO15079 494 aa12.9□□□□□ -0.34
VPS13A-204ENST00000376634 PTGER2P43116 358 aa12.9□□□□□ -0.34
VPS13A-204ENST00000376634 DCP1BQ8IZD4 617 aaKnown RBP12.9□□□□□ -0.34
VPS13A-204ENST00000376634 LRRC1Q9BTT6 524 aa12.9□□□□□ -0.34
VPS13A-204ENST00000376634 KLHL20Q9Y2M5 609 aa12.9□□□□□ -0.34
VPS13A-204ENST00000376634 GPD1P21695 349 aa12.9□□□□□ -0.34
VPS13A-204ENST00000376634 PDIA5Q14554 519 aa12.9□□□□□ -0.34
VPS13A-204ENST00000376634 TMEM132BQ14DG7 1078 aa12.9□□□□□ -0.34
VPS13A-204ENST00000376634 RBBP8NLQ8NC74 664 aaPredicted RBP12.9□□□□□ -0.34
VPS13A-204ENST00000376634 C3orf20Q8ND61 904 aa12.9□□□□□ -0.34
VPS13A-204ENST00000376634 BLOC1S5Q8TDH9 187 aa12.9□□□□□ -0.34
VPS13A-204ENST00000376634 ASNA1O43681 348 aa12.9□□□□□ -0.34
VPS13A-204ENST00000376634 VHLP40337 213 aa12.9□□□□□ -0.34
VPS13A-204ENST00000376634 FUT11Q495W5 492 aa12.9□□□□□ -0.34
VPS13A-204ENST00000376634 PP2D1A8MPX8 630 aa12.9□□□□□ -0.34
VPS13A-204ENST00000376634 C2CD2LO14523 706 aa12.9□□□□□ -0.34
VPS13A-204ENST00000376634 WEE2P0C1S8 567 aa12.9□□□□□ -0.34
VPS13A-204ENST00000376634 TARSP26639 723 aaKnown RBP12.9□□□□□ -0.34
VPS13A-204ENST00000376634 RFC5P40937 340 aa12.9□□□□□ -0.34
VPS13A-204ENST00000376634 SNX30Q5VWJ9 437 aa12.9□□□□□ -0.34
VPS13A-204ENST00000376634 MED8Q96G25 268 aa12.9□□□□□ -0.34
VPS13A-204ENST00000376634 SPAG17Q6Q759 2223 aa12.9□□□□□ -0.34
VPS13A-204ENST00000376634 B2RBV5 119 aa12.9□□□□□ -0.34
VPS13A-204ENST00000376634 CENPCQ03188 943 aa12.9□□□□□ -0.34
VPS13A-204ENST00000376634 LAYNQ6UX15 382 aa12.9□□□□□ -0.34
VPS13A-204ENST00000376634 SYNE4Q8N205 404 aa12.9□□□□□ -0.34
VPS13A-204ENST00000376634 UCMAQ8WVF2 138 aa12.9□□□□□ -0.34
VPS13A-204ENST00000376634 OLFM1Q99784 485 aa12.9□□□□□ -0.34
VPS13A-204ENST00000376634 UBAP1Q9NZ09 502 aa12.9□□□□□ -0.34
VPS13A-204ENST00000376634 MAGEA4P43358 317 aa12.9□□□□□ -0.34
VPS13A-204ENST00000376634 KIF2BQ8N4N8 673 aa12.9□□□□□ -0.34
VPS13A-204ENST00000376634 RNF181Q9P0P0 153 aa12.9□□□□□ -0.34
VPS13A-204ENST00000376634 F5H6K3 240 aa12.9□□□□□ -0.35
VPS13A-204ENST00000376634 STX7O15400 261 aaKnown RBP12.9□□□□□ -0.35
VPS13A-204ENST00000376634 EXTL3O43909 919 aa12.9□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms