RNA–Protein interactions for RNA: ENST00000375859.3

SPIN1-201, Transcript of spindlin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPIN1, Length 4,484 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN1-201ENST00000375859 TTC30AQ86WT1 665 aa13.14□□□□□ -0.31
SPIN1-201ENST00000375859 LRRC4CQ9HCJ2 640 aa13.14□□□□□ -0.31
SPIN1-201ENST00000375859 H7C0C1 242 aa13.14□□□□□ -0.31
SPIN1-201ENST00000375859 CD52P31358 61 aa13.14□□□□□ -0.31
SPIN1-201ENST00000375859 ATP5OP48047 213 aa13.14□□□□□ -0.31
SPIN1-201ENST00000375859 SCNN1GP51170 649 aa13.14□□□□□ -0.31
SPIN1-201ENST00000375859 OTUD4Q01804 1114 aaKnown RBP13.14□□□□□ -0.31
SPIN1-201ENST00000375859 KCNA10Q16322 511 aa13.14□□□□□ -0.31
SPIN1-201ENST00000375859 PTGISQ16647 500 aa13.14□□□□□ -0.31
SPIN1-201ENST00000375859 WSCD1Q658N2 575 aa13.14□□□□□ -0.31
SPIN1-201ENST00000375859 TAF2Q6P1X5 1199 aa13.14□□□□□ -0.31
SPIN1-201ENST00000375859 GLIS1Q8NBF1 620 aa13.14□□□□□ -0.31
SPIN1-201ENST00000375859 ACTL9Q8TC94 416 aa13.14□□□□□ -0.31
SPIN1-201ENST00000375859 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.14□□□□□ -0.317e-9■■■■■ 72.6
SPIN1-201ENST00000375859 HOMER3Q9NSC5 361 aa13.14□□□□□ -0.31
SPIN1-201ENST00000375859 ZDHHC18Q9NUE0 388 aa13.14□□□□□ -0.31
SPIN1-201ENST00000375859 DDX56Q9NY93 547 aaKnown RBP13.14□□□□□ -0.31
SPIN1-201ENST00000375859 CCNG2Q16589 344 aa13.13□□□□□ -0.31
SPIN1-201ENST00000375859 NT5DC4Q86YG4 428 aa13.13□□□□□ -0.31
SPIN1-201ENST00000375859 CACNB2Q08289 660 aaPredicted RBP13.13□□□□□ -0.31
SPIN1-201ENST00000375859 LONRF1Q17RB8 773 aa13.13□□□□□ -0.31
SPIN1-201ENST00000375859 HACE1Q8IYU2 909 aa13.13□□□□□ -0.31
SPIN1-201ENST00000375859 EPS8L3Q8TE67 593 aaKnown RBP13.13□□□□□ -0.31
SPIN1-201ENST00000375859 FAM172AQ8WUF8 416 aa13.13□□□□□ -0.31
SPIN1-201ENST00000375859 WNT8BQ93098 351 aa13.13□□□□□ -0.31
SPIN1-201ENST00000375859 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.13□□□□□ -0.31
SPIN1-201ENST00000375859 F5H423 210 aaPredicted RBP13.13□□□□□ -0.31
SPIN1-201ENST00000375859 CAND2O75155 1236 aa13.13□□□□□ -0.31
SPIN1-201ENST00000375859 FGFR1P11362 822 aa13.13□□□□□ -0.31
SPIN1-201ENST00000375859 YY1P25490 414 aa13.13□□□□□ -0.31
SPIN1-201ENST00000375859 LCLAT1Q6UWP7 414 aa13.13□□□□□ -0.31
SPIN1-201ENST00000375859 MREGQ8N565 214 aa13.13□□□□□ -0.31
SPIN1-201ENST00000375859 CXorf38Q8TB03 319 aa13.13□□□□□ -0.31
SPIN1-201ENST00000375859 PABPC3Q9H361 631 aaKnown RBP13.13□□□□□ -0.31
SPIN1-201ENST00000375859 TRMT13Q9NUP7 481 aaKnown RBP13.13□□□□□ -0.31
SPIN1-201ENST00000375859 DCDC2CA8MYV0 355 aa13.13□□□□□ -0.31
SPIN1-201ENST00000375859 AXLP30530 894 aa13.13□□□□□ -0.31
SPIN1-201ENST00000375859 ACTN2P35609 894 aa13.13□□□□□ -0.31
SPIN1-201ENST00000375859 NRLP54845 237 aa13.13□□□□□ -0.31
SPIN1-201ENST00000375859 SV2CQ496J9 727 aa13.13□□□□□ -0.31
SPIN1-201ENST00000375859 DARS2Q6PI48 645 aaKnown RBP13.13□□□□□ -0.31
SPIN1-201ENST00000375859 NPNTQ6UXI9 565 aa13.13□□□□□ -0.31
SPIN1-201ENST00000375859 LRRC4Q9HBW1 653 aa13.13□□□□□ -0.31
SPIN1-201ENST00000375859 TRPV2Q9Y5S1 764 aa13.13□□□□□ -0.31
SPIN1-201ENST00000375859 BASP1P80723 227 aaKnown RBP13.12□□□□□ -0.31
SPIN1-201ENST00000375859 SLMAPQ14BN4 828 aa13.12□□□□□ -0.31
SPIN1-201ENST00000375859 HOOK3Q86VS8 718 aa13.12□□□□□ -0.31
SPIN1-201ENST00000375859 RAET1EQ8TD07 263 aa13.12□□□□□ -0.31
SPIN1-201ENST00000375859 MGARPQ8TDB4 240 aa13.12□□□□□ -0.31
SPIN1-201ENST00000375859 BCAS4Q8TDM0 211 aa13.12□□□□□ -0.31
SPIN1-201ENST00000375859 DNAI2Q9GZS0 605 aa13.12□□□□□ -0.31
SPIN1-201ENST00000375859 DHX35Q9H5Z1 703 aaKnown RBP13.12□□□□□ -0.31
SPIN1-201ENST00000375859 SAYSD1Q9NPB0 183 aa13.12□□□□□ -0.31
SPIN1-201ENST00000375859 hCG_1818297A0A087WSY0 165 aa13.12□□□□□ -0.31
SPIN1-201ENST00000375859 TMEM88BA6NKF7 163 aa13.12□□□□□ -0.31
SPIN1-201ENST00000375859 ATXN1P54253 815 aaKnown RBP13.12□□□□□ -0.31
SPIN1-201ENST00000375859 CYP1B1Q16678 543 aa13.12□□□□□ -0.31
SPIN1-201ENST00000375859 ZC3H12AQ5D1E8 599 aaKnown RBP13.12□□□□□ -0.31
SPIN1-201ENST00000375859 TTC39CQ8N584 583 aa13.12□□□□□ -0.31
SPIN1-201ENST00000375859 FAM71DQ8N9W8 422 aa13.12□□□□□ -0.31
SPIN1-201ENST00000375859 SMG8Q8ND04 991 aaKnown RBP13.12□□□□□ -0.31
SPIN1-201ENST00000375859 VPS37BQ9H9H4 285 aa13.12□□□□□ -0.31
SPIN1-201ENST00000375859 FAM105AQ9NUU6 356 aa13.12□□□□□ -0.31
SPIN1-201ENST00000375859 TLL2Q9Y6L7 1015 aa13.12□□□□□ -0.31
SPIN1-201ENST00000375859 ANKRD65E5RJM6 399 aa13.12□□□□□ -0.31
SPIN1-201ENST00000375859 ITIH2P19823 946 aa13.12□□□□□ -0.31
SPIN1-201ENST00000375859 GBP1P32455 592 aa13.12□□□□□ -0.31
SPIN1-201ENST00000375859 LILRA4P59901 499 aa13.12□□□□□ -0.31
SPIN1-201ENST00000375859 MDH1BQ5I0G3 518 aa13.12□□□□□ -0.31
SPIN1-201ENST00000375859 USP6NLQ92738 828 aa13.12□□□□□ -0.31
SPIN1-201ENST00000375859 SH3GL2Q99962 352 aa13.12□□□□□ -0.31
SPIN1-201ENST00000375859 CDC42EP4Q9H3Q1 356 aaKnown RBP13.12□□□□□ -0.31
SPIN1-201ENST00000375859 TMBIM4Q9HC24 238 aa13.12□□□□□ -0.31
SPIN1-201ENST00000375859 GTF2IRD1Q9UHL9 959 aa13.12□□□□□ -0.31
SPIN1-201ENST00000375859 HMGB1P1B2RPK0 211 aaPredicted RBP13.11□□□□□ -0.31
SPIN1-201ENST00000375859 CAPN9O14815 690 aa13.11□□□□□ -0.31
SPIN1-201ENST00000375859 RASGRF2O14827 1237 aa13.11□□□□□ -0.31
SPIN1-201ENST00000375859 MCF2LO15068 1137 aa13.11□□□□□ -0.31
SPIN1-201ENST00000375859 KDELR1P24390 212 aa13.11□□□□□ -0.31
SPIN1-201ENST00000375859 CDH5P33151 784 aaPredicted RBP13.11□□□□□ -0.31
SPIN1-201ENST00000375859 HNRNPH2P55795 449 aaKnown RBP13.11□□□□□ -0.31
SPIN1-201ENST00000375859 NME3Q13232 169 aa13.11□□□□□ -0.31
SPIN1-201ENST00000375859 UBXN11Q5T124 520 aa13.11□□□□□ -0.31
SPIN1-201ENST00000375859 ARFGAP1Q8N6T3 406 aa13.11□□□□□ -0.31
SPIN1-201ENST00000375859 NETO2Q8NC67 525 aa13.11□□□□□ -0.31
SPIN1-201ENST00000375859 SPATA18Q8TC71 538 aa13.11□□□□□ -0.31
SPIN1-201ENST00000375859 CNPY3Q9BT09 278 aa13.11□□□□□ -0.31
SPIN1-201ENST00000375859 TRAIPQ9BWF2 469 aa13.11□□□□□ -0.31
SPIN1-201ENST00000375859 OSBPL7Q9BZF2 842 aa13.11□□□□□ -0.31
SPIN1-201ENST00000375859 TSPYL2Q9H2G4 693 aaPredicted RBP13.11□□□□□ -0.31
SPIN1-201ENST00000375859 KCNK9Q9NPC2 374 aa13.11□□□□□ -0.31
SPIN1-201ENST00000375859 KIAA1257Q9ULG3 409 aa13.11□□□□□ -0.31
SPIN1-201ENST00000375859 LRRC37A2A6NM11 1700 aa13.11□□□□□ -0.31
SPIN1-201ENST00000375859 HAS3O00219 553 aa13.11□□□□□ -0.31
SPIN1-201ENST00000375859 LIASO43766 372 aa13.11□□□□□ -0.31
SPIN1-201ENST00000375859 B3GAT3O94766 335 aa13.11□□□□□ -0.31
SPIN1-201ENST00000375859 THP07101 528 aa13.11□□□□□ -0.31
SPIN1-201ENST00000375859 CDKN2BP42772 138 aa13.11□□□□□ -0.31
SPIN1-201ENST00000375859 EIF3EP60228 445 aaKnown RBP13.11□□□□□ -0.31
SPIN1-201ENST00000375859 SP3Q02447 781 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms