RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 STMN3Q9NZ72 180 aa14.2□□□□□ -0.14
COL4A1-201ENST00000375820 PADI4Q9UM07 663 aa14.2□□□□□ -0.14
COL4A1-201ENST00000375820 PCDHB2Q9Y5E7 798 aa14.2□□□□□ -0.14
COL4A1-201ENST00000375820 DUSP10Q9Y6W6 482 aa14.2□□□□□ -0.14
COL4A1-201ENST00000375820 E9PBE3 544 aa14.2□□□□□ -0.14
COL4A1-201ENST00000375820 KLHL41O60662 606 aa14.2□□□□□ -0.14
COL4A1-201ENST00000375820 SOAT2O75908 522 aa14.2□□□□□ -0.14
COL4A1-201ENST00000375820 HSD17B3P37058 310 aa14.2□□□□□ -0.14
COL4A1-201ENST00000375820 ALDH9A1P49189 494 aa14.2□□□□□ -0.14
COL4A1-201ENST00000375820 STILQ15468 1287 aa14.2□□□□□ -0.14
COL4A1-201ENST00000375820 FAM83EQ2M2I3 478 aa14.2□□□□□ -0.14
COL4A1-201ENST00000375820 KLHDC7AQ5VTJ3 777 aa14.2□□□□□ -0.14
COL4A1-201ENST00000375820 VPS37AQ8NEZ2 397 aa14.2□□□□□ -0.14
COL4A1-201ENST00000375820 MED8Q96G25 268 aa14.2□□□□□ -0.14
COL4A1-201ENST00000375820 SLC38A7Q9NVC3 462 aa14.2□□□□□ -0.14
COL4A1-201ENST00000375820 CDY2AQ9Y6F7 541 aa14.2□□□□□ -0.14
COL4A1-201ENST00000375820 CDY1Q9Y6F8 540 aa14.2□□□□□ -0.14
COL4A1-201ENST00000375820 KATNA1O75449 491 aa14.19□□□□□ -0.14
COL4A1-201ENST00000375820 FLT3P36888 993 aa14.19□□□□□ -0.14
COL4A1-201ENST00000375820 MTFR1Q15390 333 aa14.19□□□□□ -0.14
COL4A1-201ENST00000375820 NOTUMQ6P988 496 aa14.19□□□□□ -0.14
COL4A1-201ENST00000375820 KRT35Q92764 455 aa14.19□□□□□ -0.14
COL4A1-201ENST00000375820 PPP2R3CQ969Q6 453 aa14.19□□□□□ -0.14
COL4A1-201ENST00000375820 ERP44Q9BS26 406 aa14.19□□□□□ -0.14
COL4A1-201ENST00000375820 PACSIN1Q9BY11 444 aa14.19□□□□□ -0.14
COL4A1-201ENST00000375820 EIF3LQ9Y262 564 aaKnown RBP14.19□□□□□ -0.14
COL4A1-201ENST00000375820 A8MX80 341 aa14.19□□□□□ -0.14
COL4A1-201ENST00000375820 PCSK1P29120 753 aa14.19□□□□□ -0.14
COL4A1-201ENST00000375820 SOX10P56693 466 aa14.19□□□□□ -0.14
COL4A1-201ENST00000375820 DEFA1P59665 94 aa14.19□□□□□ -0.14
COL4A1-201ENST00000375820 DEFA3P59666 94 aa14.19□□□□□ -0.14
COL4A1-201ENST00000375820 CSNK2BP67870 215 aa14.19□□□□□ -0.14
COL4A1-201ENST00000375820 EFHC1Q5JVL4 640 aa14.19□□□□□ -0.14
COL4A1-201ENST00000375820 TMED8Q6PL24 325 aaPredicted RBP14.19□□□□□ -0.14
COL4A1-201ENST00000375820 PARK7Q99497 189 aaKnown RBP14.19□□□□□ -0.14
COL4A1-201ENST00000375820 FBXO28Q9NVF7 368 aa14.19□□□□□ -0.14
COL4A1-201ENST00000375820 INTS13Q9NVM9 706 aa14.19□□□□□ -0.14
COL4A1-201ENST00000375820 SPATA31A3Q5VYP0 1347 aa14.19□□□□□ -0.14
COL4A1-201ENST00000375820 GNG14A0A1W2PPG7 69 aa14.19□□□□□ -0.14
COL4A1-201ENST00000375820 IQCA1LA6NCM1 817 aa14.19□□□□□ -0.14
COL4A1-201ENST00000375820 FGFR1P11362 822 aa14.19□□□□□ -0.14
COL4A1-201ENST00000375820 ACADSBP45954 432 aa14.19□□□□□ -0.14
COL4A1-201ENST00000375820 NFIL3Q16649 462 aa14.19□□□□□ -0.14
COL4A1-201ENST00000375820 NAPEPLDQ6IQ20 393 aa14.19□□□□□ -0.14
COL4A1-201ENST00000375820 NT5DC3Q86UY8 548 aa14.19□□□□□ -0.14
COL4A1-201ENST00000375820 KIRREL3Q8IZU9 778 aa14.19□□□□□ -0.14
COL4A1-201ENST00000375820 OR8H2Q8N162 312 aa14.19□□□□□ -0.14
COL4A1-201ENST00000375820 NACC2Q96BF6 587 aa14.19□□□□□ -0.14
COL4A1-201ENST00000375820 RBBP8Q99708 897 aa14.19□□□□□ -0.14
COL4A1-201ENST00000375820 COPS7BQ9H9Q2 264 aaPredicted RBP14.19□□□□□ -0.14
COL4A1-201ENST00000375820 HACL1Q9UJ83 578 aa14.19□□□□□ -0.14
COL4A1-201ENST00000375820 PSMA4P25789 261 aaKnown RBP14.19□□□□□ -0.14
COL4A1-201ENST00000375820 GMPSP49915 693 aaPredicted RBP14.19□□□□□ -0.14
COL4A1-201ENST00000375820 EFEMP1Q12805 493 aa14.19□□□□□ -0.14
COL4A1-201ENST00000375820 CNTN1Q12860 1018 aa14.19□□□□□ -0.14
COL4A1-201ENST00000375820 STARD3Q14849 445 aa14.19□□□□□ -0.14
COL4A1-201ENST00000375820 SGSM3Q96HU1 749 aa14.19□□□□□ -0.14
COL4A1-201ENST00000375820 ERAP1Q9NZ08 941 aa14.19□□□□□ -0.14
COL4A1-201ENST00000375820 TAF6LQ9Y6J9 622 aa14.19□□□□□ -0.14
COL4A1-201ENST00000375820 PNPLA7Q6ZV29 1317 aa14.19□□□□□ -0.14
COL4A1-201ENST00000375820 CCT8L1PA6NM43 557 aa14.19□□□□□ -0.14
COL4A1-201ENST00000375820 C2orf81A6NN90 581 aa14.19□□□□□ -0.14
COL4A1-201ENST00000375820 STAU1O95793 577 aaKnown RBP14.19□□□□□ -0.14
COL4A1-201ENST00000375820 CLCN3P51790 818 aa14.19□□□□□ -0.14
COL4A1-201ENST00000375820 AASDHQ4L235 1098 aaPredicted RBP14.19□□□□□ -0.14
COL4A1-201ENST00000375820 ARHGAP15Q53QZ3 475 aa14.19□□□□□ -0.14
COL4A1-201ENST00000375820 PTAR1Q7Z6K3 402 aaPredicted RBP14.19□□□□□ -0.14
COL4A1-201ENST00000375820 SIX5Q8N196 739 aa14.19□□□□□ -0.14
COL4A1-201ENST00000375820 CCSER1Q9C0I3 900 aa14.19□□□□□ -0.14
COL4A1-201ENST00000375820 GPRC5DQ9NZD1 345 aa14.19□□□□□ -0.14
COL4A1-201ENST00000375820 B3GAT3O94766 335 aa14.18□□□□□ -0.14
COL4A1-201ENST00000375820 TAF6P49848 677 aa14.18□□□□□ -0.14
COL4A1-201ENST00000375820 ATP12AP54707 1039 aa14.18□□□□□ -0.14
COL4A1-201ENST00000375820 FICDQ9BVA6 458 aa14.18□□□□□ -0.14
COL4A1-201ENST00000375820 EPB41L4AQ9HCS5 686 aaPredicted RBP14.18□□□□□ -0.14
COL4A1-201ENST00000375820 C17orf102A2RUQ5 167 aa14.18□□□□□ -0.14
COL4A1-201ENST00000375820 OTUD4Q01804 1114 aaKnown RBP14.18□□□□□ -0.14
COL4A1-201ENST00000375820 DSG1Q02413 1049 aa14.18□□□□□ -0.14
COL4A1-201ENST00000375820 TRAF2Q12933 501 aa14.18□□□□□ -0.14
COL4A1-201ENST00000375820 TRIM32Q13049 653 aa14.18□□□□□ -0.14
COL4A1-201ENST00000375820 CAMK2GQ13555 558 aaPredicted RBP14.18□□□□□ -0.14
COL4A1-201ENST00000375820 USP39Q53GS9 565 aaKnown RBP14.18□□□□□ -0.14
COL4A1-201ENST00000375820 CACHD1Q5VU97 1274 aa14.18□□□□□ -0.14
COL4A1-201ENST00000375820 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.18□□□□□ -0.14
COL4A1-201ENST00000375820 TBX20Q9UMR3 447 aa14.18□□□□□ -0.14
COL4A1-201ENST00000375820 ERI2A8K979 691 aaKnown RBP14.18□□□□□ -0.14
COL4A1-201ENST00000375820 RCAN1P53805 252 aa14.18□□□□□ -0.14
COL4A1-201ENST00000375820 SLC30A9Q6PML9 568 aa14.18□□□□□ -0.14
COL4A1-201ENST00000375820 GPRASP2Q96D09 838 aa14.18□□□□□ -0.14
COL4A1-201ENST00000375820 ZNF333Q96JL9 665 aa14.18□□□□□ -0.14
COL4A1-201ENST00000375820 ODC1P11926 461 aa14.18□□□□□ -0.14
COL4A1-201ENST00000375820 HUNKP57058 714 aa14.18□□□□□ -0.14
COL4A1-201ENST00000375820 NFYCQ13952 458 aa14.18□□□□□ -0.14
COL4A1-201ENST00000375820 PHKG1Q16816 387 aa14.18□□□□□ -0.14
COL4A1-201ENST00000375820 FBXO32Q969P5 355 aa14.18□□□□□ -0.14
COL4A1-201ENST00000375820 TADA1Q96BN2 335 aa14.18□□□□□ -0.14
COL4A1-201ENST00000375820 TMEM121Q9BTD3 319 aa14.18□□□□□ -0.14
COL4A1-201ENST00000375820 RPS6KB2Q9UBS0 482 aa14.18□□□□□ -0.14
COL4A1-201ENST00000375820 TIMM13Q9Y5L4 95 aaPredicted RBP14.18□□□□□ -0.14
COL4A1-201ENST00000375820 CASTOR2A6NHX0 329 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms