RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 SLITRK1Q96PX8 696 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 HAUS8Q9BT25 410 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 PIM2Q9P1W9 311 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 PIN4Q9Y237 131 aaKnown RBP6.81□□□□□ -1.32
SMC1A-202ENST00000375340 ADGRA2Q96PE1 1338 aa6.81□□□□□ -1.32
SMC1A-202ENST00000375340 SNX2O60749 519 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 GH1P01241 217 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 VTNP04004 478 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 FGRP09769 529 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 ZFXP17010 805 aaPredicted RBP6.8□□□□□ -1.32
SMC1A-202ENST00000375340 ELK3P41970 407 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 VCPP55072 806 aaKnown RBP6.8□□□□□ -1.32
SMC1A-202ENST00000375340 MTFR1Q15390 333 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 DCAF6Q58WW2 860 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 DUPD1Q68J44 220 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 CES3Q6UWW8 571 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 PRELID2Q8N945 189 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 ETNPPLQ8TBG4 499 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 SGF29Q96ES7 293 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 BTBD10Q9BSF8 475 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 SP110Q9HB58 689 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 TUBGCP6Q96RT7 1819 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 GRIN2DO15399 1336 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 MICAL2O94851 1124 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 LCA5LO95447 670 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 CALB2P22676 271 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 SERPINB3P29508 390 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 MAMLD1Q13495 774 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 ATP13A4Q4VNC1 1196 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 ABRAQ8N0Z2 381 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 ZCCHC9Q8N567 271 aaKnown RBP6.8□□□□□ -1.32
SMC1A-202ENST00000375340 DIS3LQ8TF46 1054 aaKnown RBP6.8□□□□□ -1.32
SMC1A-202ENST00000375340 CISHQ9NSE2 258 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 IL18RAPO95256 599 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 JAM2P57087 298 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 UBAP2LQ14157 1087 aaKnown RBP6.8□□□□□ -1.32
SMC1A-202ENST00000375340 ITPRIPL1Q6GPH6 555 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 ANGPTL8Q6UXH0 198 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 SV2AQ7L0J3 742 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 ALYREFQ86V81 257 aaKnown RBP6.8□□□□□ -1.32
SMC1A-202ENST00000375340 IPMKQ8NFU5 416 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 LRRC15Q8TF66 581 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 FAM172AQ8WUF8 416 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 ALG3Q92685 438 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 AKT1S1Q96B36 256 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 MAGEA13PA6NCF6 341 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 PGK2P07205 417 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 ZNF286BP0CG31 522 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 ATP4AP20648 1035 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 MRPS35P82673 323 aaKnown RBP6.8□□□□□ -1.32
SMC1A-202ENST00000375340 FAAP100Q0VG06 881 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 PDPK2PQ6A1A2 396 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 ACOT1Q86TX2 421 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 POU5F2Q8N7G0 328 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 GDPD5Q8WTR4 605 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 SEMA4DQ92854 862 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 MARK4Q96L34 752 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 EML4Q9HC35 981 aaKnown RBP6.8□□□□□ -1.32
SMC1A-202ENST00000375340 LRRC4BQ9NT99 713 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 HACL1Q9UJ83 578 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 UBA6A0AVT1 1052 aaPredicted RBP6.8□□□□□ -1.32
SMC1A-202ENST00000375340 KBTBD13C9JR72 458 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 SMNDC1O75940 238 aaKnown RBP eCLIP6.8□□□□□ -1.32
SMC1A-202ENST00000375340 RHBDL3P58872 404 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 FLOT2Q14254 428 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 TDRD5Q8NAT2 981 aaKnown RBP6.8□□□□□ -1.32
SMC1A-202ENST00000375340 FAM151AQ8WW52 585 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 PCDHB18PQ96TA0 734 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 BCAS3Q9H6U6 928 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 ATXN2Q99700 1313 aaKnown RBP6.8□□□□□ -1.32
SMC1A-202ENST00000375340 TJP1Q07157 1748 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 BNIP3LO60238 219 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 SRP72O76094 671 aaKnown RBP6.8□□□□□ -1.32
SMC1A-202ENST00000375340 CACNA2D1P54289 1103 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 ANGEL2Q5VTE6 544 aaKnown RBP6.8□□□□□ -1.32
SMC1A-202ENST00000375340 PALB2Q86YC2 1186 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 EPS8L1Q8TE68 723 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 LPAR1Q92633 364 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 INPP4AQ96PE3 977 aaPredicted RBP6.8□□□□□ -1.32
SMC1A-202ENST00000375340 ADNPQ9H2P0 1102 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 FAM96AQ9H5X1 160 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 PCYOX1Q9UHG3 505 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 F8VP50 259 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 DNALI1O14645 258 aaPredicted RBP6.8□□□□□ -1.32
SMC1A-202ENST00000375340 CXCL8P10145 99 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 ETFBP38117 255 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 SERPINB9P50453 376 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 MXD4Q14582 209 aaPredicted RBP6.8□□□□□ -1.32
SMC1A-202ENST00000375340 ARHGAP18Q8N392 663 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 ATPAF2Q8N5M1 289 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 KLHL4Q9C0H6 718 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 ING2Q9H160 280 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 RNF103-CHMP3A0A140T963 221 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 SUPT20HL2P0C7V6 817 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 SLC1A6P48664 564 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 RBP5P82980 135 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 SLC20A2Q08357 652 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 LRRC74BQ6ZQY2 392 aa6.8□□□□□ -1.32
SMC1A-202ENST00000375340 SPDYE1Q8NFV5 336 aaPredicted RBP6.8□□□□□ -1.32
SMC1A-202ENST00000375340 APOPT1Q96IL0 206 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms