RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 SLC4A11Q8NBS3 891 aa12.71□□□□□ -0.37
HMGCL-202ENST00000374487 MDM1Q8TC05 714 aa12.71□□□□□ -0.37
HMGCL-202ENST00000374487 RAPGEF5Q92565 580 aa12.71□□□□□ -0.37
HMGCL-202ENST00000374487 ZWILCHQ9H900 591 aa12.71□□□□□ -0.37
HMGCL-202ENST00000374487 WDR35Q9P2L0 1181 aa12.71□□□□□ -0.37
HMGCL-202ENST00000374487 CYTH4Q9UIA0 394 aa12.71□□□□□ -0.37
HMGCL-202ENST00000374487 DNPEPQ9ULA0 475 aa12.71□□□□□ -0.37
HMGCL-202ENST00000374487 NEU2Q9Y3R4 380 aa12.71□□□□□ -0.37
HMGCL-202ENST00000374487 CILPO75339 1184 aa12.71□□□□□ -0.37
HMGCL-202ENST00000374487 KRT7P08729 469 aa12.71□□□□□ -0.37
HMGCL-202ENST00000374487 CORO7P57737 925 aa12.71□□□□□ -0.37
HMGCL-202ENST00000374487 RBP5P82980 135 aa12.71□□□□□ -0.37
HMGCL-202ENST00000374487 GRIK4Q16099 956 aa12.71□□□□□ -0.37
HMGCL-202ENST00000374487 LONRF1Q17RB8 773 aa12.71□□□□□ -0.37
HMGCL-202ENST00000374487 P3H1Q32P28 736 aa12.71□□□□□ -0.37
HMGCL-202ENST00000374487 FAM47CQ5HY64 1035 aa12.71□□□□□ -0.37
HMGCL-202ENST00000374487 POLNQ7Z5Q5 900 aa12.71□□□□□ -0.37
HMGCL-202ENST00000374487 CPXM1Q96SM3 734 aa12.71□□□□□ -0.37
HMGCL-202ENST00000374487 MTG1Q9BT17 334 aaPredicted RBP12.71□□□□□ -0.37
HMGCL-202ENST00000374487 DPP3Q9NY33 737 aa12.71□□□□□ -0.37
HMGCL-202ENST00000374487 TJP2Q9UDY2 1190 aa12.71□□□□□ -0.37
HMGCL-202ENST00000374487 HMGXB4Q9UGU5 601 aa12.71□□□□□ -0.37
HMGCL-202ENST00000374487 ITGA11Q9UKX5 1188 aa12.71□□□□□ -0.37
HMGCL-202ENST00000374487 GINS2Q9Y248 185 aa12.71□□□□□ -0.37
HMGCL-202ENST00000374487 CEP290O15078 2479 aa12.71□□□□□ -0.38
HMGCL-202ENST00000374487 M0QYV0 167 aa12.7□□□□□ -0.38
HMGCL-202ENST00000374487 TRIM66O15016 1216 aa12.7□□□□□ -0.38
HMGCL-202ENST00000374487 MEFVO15553 781 aaPredicted RBP12.7□□□□□ -0.38
HMGCL-202ENST00000374487 TSPAN1O60635 241 aa12.7□□□□□ -0.38
HMGCL-202ENST00000374487 KIAA0754O94854 1291 aa12.7□□□□□ -0.38
HMGCL-202ENST00000374487 CDKN2BP42772 138 aa12.7□□□□□ -0.38
HMGCL-202ENST00000374487 PDE4CQ08493 712 aa12.7□□□□□ -0.38
HMGCL-202ENST00000374487 AUHQ13825 339 aaKnown RBP12.7□□□□□ -0.38
HMGCL-202ENST00000374487 ZNF268Q14587 947 aaPredicted RBP12.7□□□□□ -0.38
HMGCL-202ENST00000374487 DGKDQ16760 1214 aa12.7□□□□□ -0.38
HMGCL-202ENST00000374487 CHRDL2Q6WN34 429 aa12.7□□□□□ -0.38
HMGCL-202ENST00000374487 CEP128Q6ZU80 1094 aa12.7□□□□□ -0.38
HMGCL-202ENST00000374487 PRUNE1Q86TP1 453 aa12.7□□□□□ -0.38
HMGCL-202ENST00000374487 FAM126BQ8IXS8 530 aa12.7□□□□□ -0.38
HMGCL-202ENST00000374487 HAUS1Q96CS2 278 aa12.7□□□□□ -0.38
HMGCL-202ENST00000374487 TWNKQ96RR1 684 aa12.7□□□□□ -0.38
HMGCL-202ENST00000374487 ELOVL4Q9GZR5 314 aa12.7□□□□□ -0.38
HMGCL-202ENST00000374487 VRTNQ9H8Y1 702 aa12.7□□□□□ -0.38
HMGCL-202ENST00000374487 hCG_1818297A0A087WSY0 165 aa12.7□□□□□ -0.38
HMGCL-202ENST00000374487 A0A1B0GUA9 196 aa12.7□□□□□ -0.38
HMGCL-202ENST00000374487 MICAL2O94851 1124 aa12.7□□□□□ -0.38
HMGCL-202ENST00000374487 VDRP11473 427 aa12.7□□□□□ -0.38
HMGCL-202ENST00000374487 CYP2C9P11712 490 aa12.7□□□□□ -0.38
HMGCL-202ENST00000374487 CHN1P15882 459 aa12.7□□□□□ -0.38
HMGCL-202ENST00000374487 KLRC2P26717 231 aa12.7□□□□□ -0.38
HMGCL-202ENST00000374487 PTPN7P35236 360 aa12.7□□□□□ -0.38
HMGCL-202ENST00000374487 MMP13P45452 471 aa12.7□□□□□ -0.38
HMGCL-202ENST00000374487 ARSEP51690 589 aa12.7□□□□□ -0.38
HMGCL-202ENST00000374487 CNGA2Q16280 664 aa12.7□□□□□ -0.38
HMGCL-202ENST00000374487 SMTNL2Q2TAL5 461 aa12.7□□□□□ -0.38
HMGCL-202ENST00000374487 DRICH1Q6PGQ1 229 aaPredicted RBP12.7□□□□□ -0.38
HMGCL-202ENST00000374487 XYLT1Q86Y38 959 aa12.7□□□□□ -0.38
HMGCL-202ENST00000374487 KIAA0319LQ8IZA0 1049 aa12.7□□□□□ -0.38
HMGCL-202ENST00000374487 EMC1Q8N766 993 aa12.7□□□□□ -0.38
HMGCL-202ENST00000374487 SLC43A3Q8NBI5 491 aa12.7□□□□□ -0.38
HMGCL-202ENST00000374487 JOSD2Q8TAC2 188 aa12.7□□□□□ -0.38
HMGCL-202ENST00000374487 CXorf38Q8TB03 319 aa12.7□□□□□ -0.38
HMGCL-202ENST00000374487 KIF12Q96FN5 646 aa12.7□□□□□ -0.38
HMGCL-202ENST00000374487 PWWP2AQ96N64 755 aa12.7□□□□□ -0.38
HMGCL-202ENST00000374487 SERPINB12Q96P63 405 aa12.7□□□□□ -0.38
HMGCL-202ENST00000374487 METTL5Q9NRN9 209 aaKnown RBP12.7□□□□□ -0.38
HMGCL-202ENST00000374487 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.7□□□□□ -0.38
HMGCL-202ENST00000374487 COLQQ9Y215 455 aaPredicted RBP12.7□□□□□ -0.38
HMGCL-202ENST00000374487 C2CD2Q9Y426 696 aa12.7□□□□□ -0.38
HMGCL-202ENST00000374487 NR2E3Q9Y5X4 410 aa12.7□□□□□ -0.38
HMGCL-202ENST00000374487 EVPLQ92817 2033 aa12.69□□□□□ -0.38
HMGCL-202ENST00000374487 LRCH4O75427 683 aa12.69□□□□□ -0.38
HMGCL-202ENST00000374487 RNF8O76064 485 aa12.69□□□□□ -0.38
HMGCL-202ENST00000374487 ERBB2P04626 1255 aa12.69□□□□□ -0.38
HMGCL-202ENST00000374487 ATP5DP30049 168 aa12.69□□□□□ -0.38
HMGCL-202ENST00000374487 MAGEA10P43363 369 aaPredicted RBP12.69□□□□□ -0.38
HMGCL-202ENST00000374487 MYO1EQ12965 1108 aa12.69□□□□□ -0.38
HMGCL-202ENST00000374487 KIZQ2M2Z5 673 aa12.69□□□□□ -0.38
HMGCL-202ENST00000374487 KCNT1Q5JUK3 1230 aa12.69□□□□□ -0.38
HMGCL-202ENST00000374487 MARCH8Q5T0T0 291 aa12.69□□□□□ -0.38
HMGCL-202ENST00000374487 MFSD5Q6N075 450 aa12.69□□□□□ -0.38
HMGCL-202ENST00000374487 CPLX4Q7Z7G2 160 aa12.69□□□□□ -0.38
HMGCL-202ENST00000374487 ZNF410Q86VK4 478 aa12.69□□□□□ -0.38
HMGCL-202ENST00000374487 IPO4Q8TEX9 1081 aaKnown RBP12.69□□□□□ -0.38
HMGCL-202ENST00000374487 FNIP1Q8TF40 1166 aa12.69□□□□□ -0.38
HMGCL-202ENST00000374487 CENPTQ96BT3 561 aa12.69□□□□□ -0.38
HMGCL-202ENST00000374487 XPO6Q96QU8 1125 aaKnown RBP12.69□□□□□ -0.38
HMGCL-202ENST00000374487 CCDC77Q9BR77 488 aa12.69□□□□□ -0.38
HMGCL-202ENST00000374487 PPP1R12CQ9BZL4 782 aa12.69□□□□□ -0.38
HMGCL-202ENST00000374487 RASSF4Q9H2L5 321 aa12.69□□□□□ -0.38
HMGCL-202ENST00000374487 INTS9Q9NV88 658 aaKnown RBP12.69□□□□□ -0.38
HMGCL-202ENST00000374487 SETD4Q9NVD3 440 aa12.69□□□□□ -0.38
HMGCL-202ENST00000374487 BARX2Q9UMQ3 279 aaPredicted RBP12.69□□□□□ -0.38
HMGCL-202ENST00000374487 DRG1Q9Y295 367 aaKnown RBP12.69□□□□□ -0.38
HMGCL-202ENST00000374487 SGK1O00141 431 aa12.69□□□□□ -0.38
HMGCL-202ENST00000374487 IFNB1P01574 187 aa12.69□□□□□ -0.38
HMGCL-202ENST00000374487 HOXD8P13378 290 aaPredicted RBP12.69□□□□□ -0.38
HMGCL-202ENST00000374487 NDST1P52848 882 aa12.69□□□□□ -0.38
HMGCL-202ENST00000374487 VCPP55072 806 aaKnown RBP12.69□□□□□ -0.38
HMGCL-202ENST00000374487 DYNLT1P63172 113 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms