RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 ACCSLQ4AC99 568 aa12.31□□□□□ -0.44
DEPDC1-201ENST00000370966 GLRA4Q5JXX5 417 aa12.31□□□□□ -0.44
DEPDC1-201ENST00000370966 CYB5D1Q6P9G0 228 aa12.31□□□□□ -0.44
DEPDC1-201ENST00000370966 WDR59Q6PJI9 974 aa12.31□□□□□ -0.44
DEPDC1-201ENST00000370966 ZFPM1Q8IX07 1006 aa12.31□□□□□ -0.44
DEPDC1-201ENST00000370966 RAET1EQ8TD07 263 aa12.31□□□□□ -0.44
DEPDC1-201ENST00000370966 LRRC40Q9H9A6 602 aa12.31□□□□□ -0.44
DEPDC1-201ENST00000370966 WARS2Q9UGM6 360 aaKnown RBP12.31□□□□□ -0.44
DEPDC1-201ENST00000370966 DCDC2Q9UHG0 476 aa12.31□□□□□ -0.44
DEPDC1-201ENST00000370966 ITGA11Q9UKX5 1188 aa12.31□□□□□ -0.44
DEPDC1-201ENST00000370966 ZC3H4Q9UPT8 1303 aaKnown RBP12.31□□□□□ -0.44
DEPDC1-201ENST00000370966 CCDC78A2IDD5 438 aa12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 C17orf102A2RUQ5 167 aa12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 ZSCAN5CA6NGD5 496 aaPredicted RBP12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 AP1G2O75843 785 aa12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 KRT16P08779 473 aa12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 HMOX2P30519 316 aa12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 INPP1P49441 399 aa12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 CBWD6Q4V339 395 aa12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 CBWD3Q5JTY5 395 aa12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 CBWD5Q5RIA9 395 aa12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 EFL1Q7Z2Z2 1120 aaKnown RBP12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 SLFN11Q7Z7L1 901 aa12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 PGM2Q96G03 612 aa12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 ZNF512Q96ME7 567 aaPredicted RBP12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 PAFAH2Q99487 392 aa12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 FAM198AQ9UFP1 575 aa12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 SLC39A10Q9ULF5 831 aa12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 BARX2Q9UMQ3 279 aaPredicted RBP12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 CDYLQ9Y232 598 aa12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 H3BRB1 525 aa12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 RIPK2O43353 540 aa12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 PGK2P07205 417 aa12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 HNRNPH1P31943 449 aaKnown RBP12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 GEMP55040 296 aa12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 COL9A3Q14050 684 aaPredicted RBP12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 FAM83EQ2M2I3 478 aa12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 FBXO16Q8IX29 292 aaPredicted RBP12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 SHCBP1Q8NEM2 672 aa12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 ILKAPQ9H0C8 392 aaPredicted RBP12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 KDM4CQ9H3R0 1056 aa12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 TUT1Q9H6E5 874 aaKnown RBP12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 AAR2Q9Y312 384 aaKnown RBP12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 A0A087WZ62 844 aa12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 BTNL10A8MVZ5 291 aa12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 DPYSL4O14531 572 aa12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 B3GAT3O94766 335 aa12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 RARAP10276 462 aa12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 LBRQ14739 615 aaKnown RBP12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 GRIK5Q16478 980 aa12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 TMEM259Q4ZIN3 620 aa12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 MDH1BQ5I0G3 518 aa12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 IL31Q6EBC2 164 aa12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 DNAAF5Q86Y56 855 aa12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 NT5DC4Q86YG4 428 aa12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 STKLD1Q8NE28 680 aa12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 DNAJC9Q8WXX5 260 aa12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 FDXACB1Q9BRP7 624 aaPredicted RBP12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 PCDHGB4Q9UN71 923 aa12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 SYCE1LA8MT33 242 aa12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 DNALI1O14645 258 aaPredicted RBP12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 NKRFO15226 690 aaKnown RBP eCLIP12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 TM9SF1O15321 606 aa12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 DNAJC6O75061 913 aa12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 SASH3O75995 380 aa12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 CSPG5O95196 566 aa12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 PAEPP09466 180 aa12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 EIF4BP23588 611 aaKnown RBP12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 DYNC1I2Q13409 638 aaKnown RBP12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 ACAP1Q15027 740 aa12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 TMCO4Q5TGY1 634 aa12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 PLEKHH3Q7Z736 793 aa12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 PRPF39Q86UA1 669 aaKnown RBP12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 EMC1Q8N766 993 aa12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 TNFRSF25Q93038 417 aa12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 MMTAG2Q9BU76 263 aaKnown RBP12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 AP4E1Q9UPM8 1137 aa12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 VPS9D1Q9Y2B5 631 aa12.3□□□□□ -0.44
DEPDC1-201ENST00000370966 ANKRD26Q9UPS8 1709 aa12.29□□□□□ -0.44
DEPDC1-201ENST00000370966 SLIT3O75094 1523 aa12.29□□□□□ -0.44
DEPDC1-201ENST00000370966 HIST1H2AGP0C0S8 130 aaPredicted RBP12.29□□□□□ -0.44
DEPDC1-201ENST00000370966 CXCL8P10145 99 aa12.29□□□□□ -0.44
DEPDC1-201ENST00000370966 HIST1H2ADP20671 130 aa12.29□□□□□ -0.44
DEPDC1-201ENST00000370966 KCNMA1Q12791 1236 aa12.29□□□□□ -0.44
DEPDC1-201ENST00000370966 IL17AQ16552 155 aa12.29□□□□□ -0.44
DEPDC1-201ENST00000370966 RBBP7Q16576 425 aa12.29□□□□□ -0.44
DEPDC1-201ENST00000370966 KIZQ2M2Z5 673 aa12.29□□□□□ -0.44
DEPDC1-201ENST00000370966 LRRC23Q53EV4 343 aaPredicted RBP12.29□□□□□ -0.44
DEPDC1-201ENST00000370966 VSIG10LQ86VR7 867 aa12.29□□□□□ -0.44
DEPDC1-201ENST00000370966 CHSY1Q86X52 802 aa12.29□□□□□ -0.44
DEPDC1-201ENST00000370966 SUGP1Q8IWZ8 645 aaKnown RBP12.29□□□□□ -0.44
DEPDC1-201ENST00000370966 HIST1H2AHQ96KK5 128 aa12.29□□□□□ -0.44
DEPDC1-201ENST00000370966 HIST1H2AJQ99878 128 aa12.29□□□□□ -0.44
DEPDC1-201ENST00000370966 H2AFJQ9BTM1 129 aa12.29□□□□□ -0.44
DEPDC1-201ENST00000370966 NOD2Q9HC29 1040 aa12.29□□□□□ -0.44
DEPDC1-201ENST00000370966 HEY2Q9UBP5 337 aa12.29□□□□□ -0.44
DEPDC1-201ENST00000370966 PCDHB8Q9UN66 801 aa12.29□□□□□ -0.44
DEPDC1-201ENST00000370966 NAALADL1Q9UQQ1 740 aa12.29□□□□□ -0.44
DEPDC1-201ENST00000370966 GPR182O15218 404 aa12.29□□□□□ -0.44
DEPDC1-201ENST00000370966 NCAM2O15394 837 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms