RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 C5orf42Q9H799 3197 aa14.57□□□□□ -0.08
SSR4-202ENST00000370085 A0A1W2PQC6 194 aa14.56□□□□□ -0.08
SSR4-202ENST00000370085 CCDC172P0C7W6 258 aa14.56□□□□□ -0.08
SSR4-202ENST00000370085 SETSIPP0DME0 302 aa14.56□□□□□ -0.08
SSR4-202ENST00000370085 DDX6P26196 483 aaKnown RBP eCLIP14.56□□□□□ -0.08
SSR4-202ENST00000370085 GABRR2P28476 465 aa14.56□□□□□ -0.08
SSR4-202ENST00000370085 GPR15P49685 360 aa14.56□□□□□ -0.08
SSR4-202ENST00000370085 PDE6CP51160 858 aa14.56□□□□□ -0.08
SSR4-202ENST00000370085 ZNF132P52740 706 aa14.56□□□□□ -0.08
SSR4-202ENST00000370085 POLR2FP61218 127 aaKnown RBP14.56□□□□□ -0.08
SSR4-202ENST00000370085 NTHL1P78549 312 aa14.56□□□□□ -0.08
SSR4-202ENST00000370085 ZP2Q05996 745 aa14.56□□□□□ -0.08
SSR4-202ENST00000370085 BST2Q10589 180 aaKnown RBP14.56□□□□□ -0.08
SSR4-202ENST00000370085 DRAP1Q14919 205 aaPredicted RBP14.56□□□□□ -0.08
SSR4-202ENST00000370085 CNGA2Q16280 664 aa14.56□□□□□ -0.08
SSR4-202ENST00000370085 GOLGA7BQ2TAP0 167 aa14.56□□□□□ -0.08
SSR4-202ENST00000370085 SDHAF4Q5VUM1 108 aa14.56□□□□□ -0.08
SSR4-202ENST00000370085 LCLAT1Q6UWP7 414 aa14.56□□□□□ -0.08
SSR4-202ENST00000370085 PAQR9Q6ZVX9 377 aa14.56□□□□□ -0.08
SSR4-202ENST00000370085 APTXQ7Z2E3 356 aaKnown RBP14.56□□□□□ -0.08
SSR4-202ENST00000370085 RNF214Q8ND24 703 aa14.56□□□□□ -0.08
SSR4-202ENST00000370085 PDZD8Q8NEN9 1154 aa14.56□□□□□ -0.08
SSR4-202ENST00000370085 IQCDQ96DY2 449 aa14.56□□□□□ -0.08
SSR4-202ENST00000370085 MYRFLQ96LU7 910 aa14.56□□□□□ -0.08
SSR4-202ENST00000370085 UHRF1Q96T88 793 aaPredicted RBP14.56□□□□□ -0.08
SSR4-202ENST00000370085 UBXN6Q9BZV1 441 aa14.56□□□□□ -0.08
SSR4-202ENST00000370085 ATXN3LQ9H3M9 355 aa14.56□□□□□ -0.08
SSR4-202ENST00000370085 TSPAN16Q9UKR8 245 aa14.56□□□□□ -0.08
SSR4-202ENST00000370085 SIK3Q9Y2K2 1263 aa14.56□□□□□ -0.08
SSR4-202ENST00000370085 CEP83Q9Y592 693 aa14.56□□□□□ -0.08
SSR4-202ENST00000370085 FHOD1Q9Y613 1164 aa14.56□□□□□ -0.08
SSR4-202ENST00000370085 DOCK6Q96HP0 2047 aa14.56□□□□□ -0.08
SSR4-202ENST00000370085 SOBPA7XYQ1 873 aa14.55□□□□□ -0.08
SSR4-202ENST00000370085 O00370 1275 aa14.55□□□□□ -0.08
SSR4-202ENST00000370085 THAP12O43422 761 aa14.55□□□□□ -0.08
SSR4-202ENST00000370085 SP100P23497 879 aaPredicted RBP14.55□□□□□ -0.08
SSR4-202ENST00000370085 YWHAQP27348 245 aa14.55□□□□□ -0.08
SSR4-202ENST00000370085 MEA1Q16626 185 aa14.55□□□□□ -0.08
SSR4-202ENST00000370085 CLEC20AQ6ZU45 233 aa14.55□□□□□ -0.08
SSR4-202ENST00000370085 MTSS1LQ765P7 747 aa14.55□□□□□ -0.08
SSR4-202ENST00000370085 TMC8Q8IU68 726 aa14.55□□□□□ -0.08
SSR4-202ENST00000370085 ZDHHC14Q8IZN3 488 aa14.55□□□□□ -0.08
SSR4-202ENST00000370085 HS6ST3Q8IZP7 471 aa14.55□□□□□ -0.08
SSR4-202ENST00000370085 STKLD1Q8NE28 680 aa14.55□□□□□ -0.08
SSR4-202ENST00000370085 OVCA2Q8WZ82 227 aa14.55□□□□□ -0.08
SSR4-202ENST00000370085 FGF13Q92913 245 aa14.55□□□□□ -0.08
SSR4-202ENST00000370085 NXPE3Q969Y0 559 aa14.55□□□□□ -0.08
SSR4-202ENST00000370085 KCNK16Q96T55 309 aa14.55□□□□□ -0.08
SSR4-202ENST00000370085 PDCL3Q9H2J4 239 aa14.55□□□□□ -0.08
SSR4-202ENST00000370085 TRPM5Q9NZQ8 1165 aa14.55□□□□□ -0.08
SSR4-202ENST00000370085 A0A0C4DFX4 3053 aa14.54□□□□□ -0.08
SSR4-202ENST00000370085 A0A1W2PRU2 124 aa14.54□□□□□ -0.08
SSR4-202ENST00000370085 LOC730098B7Z3J9 87 aa14.54□□□□□ -0.08
SSR4-202ENST00000370085 F8VZ95 297 aa14.54□□□□□ -0.08
SSR4-202ENST00000370085 M0QYV0 167 aa14.54□□□□□ -0.08
SSR4-202ENST00000370085 RNF225M0QZC1 329 aaPredicted RBP14.54□□□□□ -0.08
SSR4-202ENST00000370085 FOXN3O00409 490 aaPredicted RBP14.54□□□□□ -0.08
SSR4-202ENST00000370085 XPO1O14980 1071 aaKnown RBP14.54□□□□□ -0.08
SSR4-202ENST00000370085 LAMP2P13473 410 aa14.54□□□□□ -0.08
SSR4-202ENST00000370085 HMGA1P17096 107 aaKnown RBP14.54□□□□□ -0.08
SSR4-202ENST00000370085 BRD2P25440 801 aaKnown RBP14.54□□□□□ -0.08
SSR4-202ENST00000370085 KRT9P35527 623 aa14.54□□□□□ -0.08
SSR4-202ENST00000370085 STAT1P42224 750 aa14.54□□□□□ -0.08
SSR4-202ENST00000370085 SLC5A3P53794 718 aa14.54□□□□□ -0.08
SSR4-202ENST00000370085 SNX16P57768 344 aa14.54□□□□□ -0.08
SSR4-202ENST00000370085 APBA1Q02410 837 aa14.54□□□□□ -0.08
SSR4-202ENST00000370085 IFRD2Q12894 506 aaPredicted RBP14.54□□□□□ -0.08
SSR4-202ENST00000370085 NR1I3Q14994 352 aa14.54□□□□□ -0.08
SSR4-202ENST00000370085 PRSS36Q5K4E3 855 aa14.54□□□□□ -0.08
SSR4-202ENST00000370085 FAM71AQ8IYT1 594 aa14.54□□□□□ -0.08
SSR4-202ENST00000370085 GJD3Q8N144 294 aa14.54□□□□□ -0.08
SSR4-202ENST00000370085 ITFG1Q8TB96 612 aa14.54□□□□□ -0.08
SSR4-202ENST00000370085 ING5Q8WYH8 240 aa14.54□□□□□ -0.08
SSR4-202ENST00000370085 FBXO32Q969P5 355 aa14.54□□□□□ -0.08
SSR4-202ENST00000370085 SMOQ99835 787 aa14.54□□□□□ -0.08
SSR4-202ENST00000370085 NUP58Q9BVL2 599 aa14.54□□□□□ -0.08
SSR4-202ENST00000370085 TTLL2Q9BWV7 592 aa14.54□□□□□ -0.08
SSR4-202ENST00000370085 NAA15Q9BXJ9 866 aaKnown RBP14.54□□□□□ -0.08
SSR4-202ENST00000370085 LRRC3Q9BY71 257 aa14.54□□□□□ -0.08
SSR4-202ENST00000370085 GANQ9H2C0 597 aa14.54□□□□□ -0.08
SSR4-202ENST00000370085 LRRC4Q9HBW1 653 aa14.54□□□□□ -0.08
SSR4-202ENST00000370085 IGSF9Q9P2J2 1179 aa14.54□□□□□ -0.08
SSR4-202ENST00000370085 EPS15L1Q9UBC2 864 aa14.54□□□□□ -0.08
SSR4-202ENST00000370085 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.54□□□□□ -0.08
SSR4-202ENST00000370085 GREB1Q4ZG55 1949 aa14.54□□□□□ -0.08
SSR4-202ENST00000370085 ZNF638Q14966 1978 aaKnown RBP14.53□□□□□ -0.08
SSR4-202ENST00000370085 C2CD4DB7Z1M9 353 aa14.53□□□□□ -0.08
SSR4-202ENST00000370085 CYP26A1O43174 497 aa14.53□□□□□ -0.08
SSR4-202ENST00000370085 TEX33O43247 280 aa14.53□□□□□ -0.08
SSR4-202ENST00000370085 CEBPBP17676 345 aa14.53□□□□□ -0.08
SSR4-202ENST00000370085 PFKLP17858 780 aa14.53□□□□□ -0.08
SSR4-202ENST00000370085 KLK7P49862 253 aa14.53□□□□□ -0.08
SSR4-202ENST00000370085 CACNA2D1P54289 1103 aa14.53□□□□□ -0.08
SSR4-202ENST00000370085 PLCB2Q00722 1185 aa14.53□□□□□ -0.08
SSR4-202ENST00000370085 MTMR3Q13615 1198 aa14.53□□□□□ -0.08
SSR4-202ENST00000370085 TEAD2Q15562 447 aa14.53□□□□□ -0.08
SSR4-202ENST00000370085 SLC5A9Q2M3M2 681 aa14.53□□□□□ -0.08
SSR4-202ENST00000370085 GPR158Q5T848 1215 aa14.53□□□□□ -0.08
SSR4-202ENST00000370085 GAREM2Q75VX8 874 aa14.53□□□□□ -0.08
SSR4-202ENST00000370085 NPAS3Q8IXF0 933 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms