RNA–Protein interactions for RNA: ENST00000369763.4

LRIF1-201, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene LRIF1, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-201ENST00000369763 AGGF1Q8N302 714 aaeCLIP11.4□□□□□ -0.59
LRIF1-201ENST00000369763 GPRASP2Q96D09 838 aa11.4□□□□□ -0.59
LRIF1-201ENST00000369763 MAGEB5Q9BZ81 275 aa11.4□□□□□ -0.59
LRIF1-201ENST00000369763 R3HDMLQ9H3Y0 253 aa11.4□□□□□ -0.59
LRIF1-201ENST00000369763 COL11A2P13942 1736 aaPredicted RBP11.4□□□□□ -0.59
LRIF1-201ENST00000369763 CAPN9O14815 690 aa11.39□□□□□ -0.59
LRIF1-201ENST00000369763 ASS1P00966 412 aaKnown RBP11.39□□□□□ -0.59
LRIF1-201ENST00000369763 ESRRAP11474 423 aaPredicted RBP11.39□□□□□ -0.59
LRIF1-201ENST00000369763 GMPRP36959 345 aa11.39□□□□□ -0.59
LRIF1-201ENST00000369763 SLC8A3P57103 927 aa11.39□□□□□ -0.59
LRIF1-201ENST00000369763 MXRA7P84157 204 aa11.39□□□□□ -0.59
LRIF1-201ENST00000369763 RINLQ6ZS11 566 aa11.39□□□□□ -0.59
LRIF1-201ENST00000369763 PDCD7Q8N8D1 485 aaKnown RBP11.39□□□□□ -0.59
LRIF1-201ENST00000369763 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.39□□□□□ -0.59
LRIF1-201ENST00000369763 DDX50Q9BQ39 737 aaKnown RBP11.39□□□□□ -0.59
LRIF1-201ENST00000369763 NIF3L1Q9GZT8 377 aa11.39□□□□□ -0.59
LRIF1-201ENST00000369763 NGRNQ9NPE2 291 aaKnown RBP11.39□□□□□ -0.59
LRIF1-201ENST00000369763 PICK1Q9NRD5 415 aa11.39□□□□□ -0.59
LRIF1-201ENST00000369763 SLC17A6Q9P2U8 582 aa11.39□□□□□ -0.59
LRIF1-201ENST00000369763 SHOC2Q9UQ13 582 aa11.39□□□□□ -0.59
LRIF1-201ENST00000369763 LTBP4Q8N2S1 1624 aa11.39□□□□□ -0.59
LRIF1-201ENST00000369763 TRIM49D1C9J1S8 452 aa11.39□□□□□ -0.59
LRIF1-201ENST00000369763 M0QYV0 167 aa11.39□□□□□ -0.59
LRIF1-201ENST00000369763 MCF2LO15068 1137 aa11.39□□□□□ -0.59
LRIF1-201ENST00000369763 BAG2O95816 211 aa11.39□□□□□ -0.59
LRIF1-201ENST00000369763 ERBB2P04626 1255 aa11.39□□□□□ -0.59
LRIF1-201ENST00000369763 KDELR1P24390 212 aa11.39□□□□□ -0.59
LRIF1-201ENST00000369763 RASSF2P50749 326 aa11.39□□□□□ -0.59
LRIF1-201ENST00000369763 THEMIS2Q5TEJ8 643 aa11.39□□□□□ -0.59
LRIF1-201ENST00000369763 MROH9Q5TGP6 573 aa11.39□□□□□ -0.59
LRIF1-201ENST00000369763 ISLR2Q6UXK2 745 aa11.39□□□□□ -0.59
LRIF1-201ENST00000369763 ARID3BQ8IVW6 561 aaPredicted RBP11.39□□□□□ -0.59
LRIF1-201ENST00000369763 RIBC1Q8N443 379 aaPredicted RBP11.39□□□□□ -0.59
LRIF1-201ENST00000369763 HIPK4Q8NE63 616 aa11.39□□□□□ -0.59
LRIF1-201ENST00000369763 SLC35B2Q8TB61 432 aa11.39□□□□□ -0.59
LRIF1-201ENST00000369763 PPP1R13LQ8WUF5 828 aa11.39□□□□□ -0.59
LRIF1-201ENST00000369763 FAM161BQ96MY7 647 aa11.39□□□□□ -0.59
LRIF1-201ENST00000369763 NMUR2Q9GZQ4 415 aa11.39□□□□□ -0.59
LRIF1-201ENST00000369763 SMYD3Q9H7B4 428 aa11.39□□□□□ -0.59
LRIF1-201ENST00000369763 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.39□□□□□ -0.59
LRIF1-201ENST00000369763 DLGAP2Q9P1A6 1054 aa11.39□□□□□ -0.59
LRIF1-201ENST00000369763 PPARGC1AQ9UBK2 798 aaKnown RBP11.39□□□□□ -0.59
LRIF1-201ENST00000369763 GINS2Q9Y248 185 aa11.39□□□□□ -0.59
LRIF1-201ENST00000369763 QSER1Q2KHR3 1735 aa11.39□□□□□ -0.59
LRIF1-201ENST00000369763 CXorf49A8MYA2 514 aaPredicted RBP11.39□□□□□ -0.59
LRIF1-201ENST00000369763 KCNN4O15554 427 aa11.39□□□□□ -0.59
LRIF1-201ENST00000369763 KIF1CO43896 1103 aaKnown RBP11.39□□□□□ -0.59
LRIF1-201ENST00000369763 TBC1D12O60347 775 aa11.39□□□□□ -0.59
LRIF1-201ENST00000369763 PTPN4P29074 926 aa11.39□□□□□ -0.59
LRIF1-201ENST00000369763 ALDH18A1P54886 795 aaKnown RBP11.39□□□□□ -0.59
LRIF1-201ENST00000369763 BACE1P56817 501 aa11.39□□□□□ -0.59
LRIF1-201ENST00000369763 CRADDP78560 199 aa11.39□□□□□ -0.59
LRIF1-201ENST00000369763 TMPRSS15P98073 1019 aa11.39□□□□□ -0.59
LRIF1-201ENST00000369763 THOC5Q13769 683 aaKnown RBP11.39□□□□□ -0.59
LRIF1-201ENST00000369763 PIGHQ14442 188 aaPredicted RBP11.39□□□□□ -0.59
LRIF1-201ENST00000369763 HADHQ16836 314 aaKnown RBP11.39□□□□□ -0.59
LRIF1-201ENST00000369763 DUOXA2Q1HG44 320 aa11.39□□□□□ -0.59
LRIF1-201ENST00000369763 ACSBG2Q5FVE4 666 aa11.39□□□□□ -0.59
LRIF1-201ENST00000369763 SLFN12LQ6IEE8 588 aa11.39□□□□□ -0.59
LRIF1-201ENST00000369763 ANO7Q6IWH7 933 aa11.39□□□□□ -0.59
LRIF1-201ENST00000369763 SHKBP1Q8TBC3 707 aa11.39□□□□□ -0.59
LRIF1-201ENST00000369763 DCAKDQ8WVC6 231 aa11.39□□□□□ -0.59
LRIF1-201ENST00000369763 RILPQ96NA2 401 aa11.39□□□□□ -0.59
LRIF1-201ENST00000369763 PGLYRP2Q96PD5 576 aa11.39□□□□□ -0.59
LRIF1-201ENST00000369763 IL1RAPL1Q9NZN1 696 aa11.39□□□□□ -0.59
LRIF1-201ENST00000369763 ZNF214Q9UL59 606 aaPredicted RBP11.39□□□□□ -0.59
LRIF1-201ENST00000369763 WASF2Q9Y6W5 498 aa11.39□□□□□ -0.59
LRIF1-201ENST00000369763 DOCK5Q9H7D0 1870 aa11.38□□□□□ -0.59
LRIF1-201ENST00000369763 RBBP6Q7Z6E9 1792 aaKnown RBP11.38□□□□□ -0.59
LRIF1-201ENST00000369763 MEI4A8MW99 385 aa11.38□□□□□ -0.59
LRIF1-201ENST00000369763 ITGAVP06756 1048 aa11.38□□□□□ -0.59
LRIF1-201ENST00000369763 EFHC2Q5JST6 749 aa11.38□□□□□ -0.59
LRIF1-201ENST00000369763 EEF1DP3Q658K8 133 aa11.38□□□□□ -0.59
LRIF1-201ENST00000369763 TMEM154Q6P9G4 183 aa11.38□□□□□ -0.59
LRIF1-201ENST00000369763 FAM83AQ86UY5 434 aa11.38□□□□□ -0.59
LRIF1-201ENST00000369763 UNC5BQ8IZJ1 945 aa11.38□□□□□ -0.59
LRIF1-201ENST00000369763 MAB21L3Q8N8X9 362 aa11.38□□□□□ -0.59
LRIF1-201ENST00000369763 NAT8LQ8N9F0 302 aa11.38□□□□□ -0.59
LRIF1-201ENST00000369763 DNAJC9Q8WXX5 260 aa11.38□□□□□ -0.59
LRIF1-201ENST00000369763 VCPIP1Q96JH7 1222 aa11.38□□□□□ -0.59
LRIF1-201ENST00000369763 HEXIM2Q96MH2 286 aaKnown RBP11.38□□□□□ -0.59
LRIF1-201ENST00000369763 TEPSINQ96N21 525 aa11.38□□□□□ -0.59
LRIF1-201ENST00000369763 HACL1Q9UJ83 578 aa11.38□□□□□ -0.59
LRIF1-201ENST00000369763 AFG3L2Q9Y4W6 797 aa11.38□□□□□ -0.59
LRIF1-201ENST00000369763 SMNDC1O75940 238 aaKnown RBP eCLIP11.38□□□□□ -0.59
LRIF1-201ENST00000369763 NAMPTP43490 491 aa11.38□□□□□ -0.59
LRIF1-201ENST00000369763 STAT5BP51692 787 aa11.38□□□□□ -0.59
LRIF1-201ENST00000369763 DPYSL3Q14195 570 aa11.38□□□□□ -0.59
LRIF1-201ENST00000369763 OR6B2Q6IFH4 312 aa11.38□□□□□ -0.59
LRIF1-201ENST00000369763 C12orf29Q8N999 325 aa11.38□□□□□ -0.59
LRIF1-201ENST00000369763 CCDC110Q8TBZ0 833 aa11.38□□□□□ -0.59
LRIF1-201ENST00000369763 JDP2Q8WYK2 163 aa11.38□□□□□ -0.59
LRIF1-201ENST00000369763 TTC1Q99614 292 aa11.38□□□□□ -0.59
LRIF1-201ENST00000369763 CEP41Q9BYV8 373 aa11.38□□□□□ -0.59
LRIF1-201ENST00000369763 ACSS3Q9H6R3 686 aa11.38□□□□□ -0.59
LRIF1-201ENST00000369763 PCMTD2Q9NV79 361 aa11.38□□□□□ -0.59
LRIF1-201ENST00000369763 NMRK1Q9NWW6 199 aa11.38□□□□□ -0.59
LRIF1-201ENST00000369763 FARP1Q9Y4F1 1045 aaPredicted RBP11.38□□□□□ -0.59
LRIF1-201ENST00000369763 SNCAIPQ9Y6H5 919 aa11.38□□□□□ -0.59
LRIF1-201ENST00000369763 MYH9P35579 1960 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms