RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 MAMLD1Q13495 774 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 ASTE1Q2TB18 679 aaPredicted RBP5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 FAM133BQ5BKY9 247 aaKnown RBP5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 TRIM68Q6AZZ1 485 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 MREGQ8N565 214 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 OR2W6PQ8NHA6 318 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 SLC7A14Q8TBB6 771 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 ZNF473Q8WTR7 871 aaKnown RBP5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 FAM172AQ8WUF8 416 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 HDAC7Q8WUI4 952 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 GCNAQ96QF7 691 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 NUDCD1Q96RS6 583 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 CCT8L2Q96SF2 557 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 IKZF4Q9H2S9 585 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 PRKAG2Q9UGJ0 569 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 ZC3H7BQ9UGR2 993 aaKnown RBP5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 SUFUQ9UMX1 484 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 POLIQ9UNA4 740 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 SHOC2Q9UQ13 582 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 A0A1B0GUL6 1792 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 KPNA7A9QM74 516 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 HOXA2O43364 376 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 CABYRO75952 493 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 SMIM10L2AP0DMW4 78 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 SMIM10L2BP0DMW5 78 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 SLC2A3P11169 496 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 SAT1P21673 171 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 KCNA3P22001 575 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 FDFT1P37268 417 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 SEC24CP53992 1094 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 OTUD4Q01804 1114 aaKnown RBP5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 ORC1Q13415 861 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 VEPH1Q14D04 833 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 SNX17Q15036 470 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 LONRF1Q17RB8 773 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 ANO4Q32M45 955 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 MAP3K21Q5TCX8 1036 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 RAB44Q7Z6P3 723 aaPredicted RBP5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 ZNF467Q7Z7K2 595 aaPredicted RBP5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 CRLF3Q8IUI8 442 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 CCNJLQ8IV13 435 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 RASGEF1CQ8N431 466 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 LRRC52Q8N7C0 313 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 SMC1BQ8NDV3 1235 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 GSDMBQ8TAX9 411 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 RAB3IL1Q8TBN0 382 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 LRRC15Q8TF66 581 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 KLHL29Q96CT2 875 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 XPO6Q96QU8 1125 aaKnown RBP5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 TGS1Q96RS0 853 aaKnown RBP5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 PPP1R12CQ9BZL4 782 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 SIK2Q9H0K1 926 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 CATSPERBQ9H7T0 1116 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 SIX2Q9NPC8 291 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 RBPJLQ9UBG7 517 aa5.55□□□□□ -1.52
SMNDC1-202ENST00000369603 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 UMODL1Q5DID0 1318 aa5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 SMIM35A0A1B0GVV1 85 aa5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 FAM47DPA6NHR8 397 aa5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 KIF1CO43896 1103 aaKnown RBP5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 RECQL4O94761 1208 aa5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 NFICP08651 508 aa5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 TGM2P21980 687 aa5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 TNFSF9P41273 254 aa5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 CTCFP49711 727 aaPredicted RBP5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 ZNF200P98182 395 aaPredicted RBP5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 DRP2Q13474 957 aa5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 SEPT6Q14141 434 aa5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 HP1BP3Q5SSJ5 553 aaPredicted RBP5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 EEF1DP3Q658K8 133 aa5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 CHADLQ6NUI6 762 aa5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 RGMBQ6NW40 437 aa5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 KLC3Q6P597 504 aa5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 ELMSAN1Q6PJG2 1045 aa5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 TMC3Q7Z5M5 1100 aa5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 POLNQ7Z5Q5 900 aa5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 TBC1D1Q86TI0 1168 aaPredicted RBP5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 ANKMY2Q8IV38 441 aa5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 WDR75Q8IWA0 830 aaKnown RBP5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 PARP9Q8IXQ6 854 aa5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 TMEM86AQ8N2M4 240 aa5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 FAM71DQ8N9W8 422 aa5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 ACTL9Q8TC94 416 aa5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 FBXL18Q96ME1 805 aa5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 DDX50Q9BQ39 737 aaKnown RBP5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 PDGFCQ9NRA1 345 aa5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 KANSL3Q9P2N6 904 aa5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 CNTNAP2Q9UHC6 1331 aa5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 MYH8P13535 1937 aa5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 C3orf70A6NLC5 250 aaPredicted RBP5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 M0QYT0 321 aa5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 TTC4O95801 387 aa5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 NCAM1P13591 858 aa5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 CHN1P15882 459 aa5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 PSMC4P43686 418 aa5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 PAPOLAP51003 745 aaKnown RBP5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 CRYBB1P53674 252 aaPredicted RBP5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 CDH8P55286 799 aa5.54□□□□□ -1.52
SMNDC1-202ENST00000369603 TMPRSS15P98073 1019 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms