RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 PLCB3Q01970 1234 aa17.67■□□□□ 0.42
PHGDH-202ENST00000369409 INTS6LQ5JSJ4 861 aaKnown RBP17.67■□□□□ 0.42
PHGDH-202ENST00000369409 CLEC20AQ6ZU45 233 aa17.67■□□□□ 0.42
PHGDH-202ENST00000369409 PIGZQ86VD9 579 aa17.67■□□□□ 0.42
PHGDH-202ENST00000369409 SCUBE3Q8IX30 993 aa17.67■□□□□ 0.42
PHGDH-202ENST00000369409 CRIPAKQ8N1N5 446 aa17.67■□□□□ 0.42
PHGDH-202ENST00000369409 MYCBPAPQ8TBZ2 947 aa17.67■□□□□ 0.42
PHGDH-202ENST00000369409 CLEC4CQ8WTT0 213 aa17.67■□□□□ 0.42
PHGDH-202ENST00000369409 PLVAPQ9BX97 442 aa17.67■□□□□ 0.42
PHGDH-202ENST00000369409 NRDE2Q9H7Z3 1164 aa17.67■□□□□ 0.42
PHGDH-202ENST00000369409 CYLDQ9NQC7 956 aa17.67■□□□□ 0.42
PHGDH-202ENST00000369409 KLHL11Q9NVR0 708 aa17.67■□□□□ 0.42
PHGDH-202ENST00000369409 PCDHB8Q9UN66 801 aa17.67■□□□□ 0.42
PHGDH-202ENST00000369409 CCDC188H7C350 402 aa17.67■□□□□ 0.42
PHGDH-202ENST00000369409 TYMPP19971 482 aa17.67■□□□□ 0.42
PHGDH-202ENST00000369409 GPD1P21695 349 aa17.67■□□□□ 0.42
PHGDH-202ENST00000369409 FLT3P36888 993 aa17.67■□□□□ 0.42
PHGDH-202ENST00000369409 RPL34P49207 117 aaKnown RBP17.67■□□□□ 0.42
PHGDH-202ENST00000369409 BCAR1P56945 870 aa17.67■□□□□ 0.42
PHGDH-202ENST00000369409 TAF5Q15542 800 aa17.67■□□□□ 0.42
PHGDH-202ENST00000369409 CLUL1Q15846 466 aa17.67■□□□□ 0.42
PHGDH-202ENST00000369409 TRNP1Q6NT89 227 aa17.67■□□□□ 0.42
PHGDH-202ENST00000369409 CNKSR3Q6P9H4 555 aa17.67■□□□□ 0.42
PHGDH-202ENST00000369409 ZDHHC17Q8IUH5 632 aa17.67■□□□□ 0.42
PHGDH-202ENST00000369409 KATNAL2Q8IYT4 538 aa17.67■□□□□ 0.42
PHGDH-202ENST00000369409 OR10T2Q8NGX3 314 aa17.67■□□□□ 0.42
PHGDH-202ENST00000369409 MYLPFQ96A32 169 aa17.67■□□□□ 0.42
PHGDH-202ENST00000369409 ACBD6Q9BR61 282 aa17.67■□□□□ 0.42
PHGDH-202ENST00000369409 DDX47Q9H0S4 455 aaKnown RBP17.67■□□□□ 0.42
PHGDH-202ENST00000369409 ARGLU1Q9NWB6 273 aaPredicted RBP17.67■□□□□ 0.42
PHGDH-202ENST00000369409 NR2E1Q9Y466 385 aa17.67■□□□□ 0.42
PHGDH-202ENST00000369409 TARSL2A2RTX5 802 aaKnown RBP17.66■□□□□ 0.42
PHGDH-202ENST00000369409 C2CD4BA6NLJ0 364 aa17.66■□□□□ 0.42
PHGDH-202ENST00000369409 TBKBP1A7MCY6 615 aa17.66■□□□□ 0.42
PHGDH-202ENST00000369409 LRCH4O75427 683 aa17.66■□□□□ 0.42
PHGDH-202ENST00000369409 AP1G2O75843 785 aa17.66■□□□□ 0.42
PHGDH-202ENST00000369409 ACADSBP45954 432 aa17.66■□□□□ 0.42
PHGDH-202ENST00000369409 MAP3K7CLP57077 242 aa17.66■□□□□ 0.42
PHGDH-202ENST00000369409 VSNL1P62760 191 aa17.66■□□□□ 0.42
PHGDH-202ENST00000369409 YWHAHQ04917 246 aaPredicted RBP17.66■□□□□ 0.42
PHGDH-202ENST00000369409 ADIGQ0VDE8 80 aa17.66■□□□□ 0.42
PHGDH-202ENST00000369409 LLGL1Q15334 1064 aa17.66■□□□□ 0.42
PHGDH-202ENST00000369409 TXNRD3NBQ6F5E7 133 aa17.66■□□□□ 0.42
PHGDH-202ENST00000369409 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.66■□□□□ 0.42
PHGDH-202ENST00000369409 SLC13A5Q86YT5 568 aaPredicted RBP17.66■□□□□ 0.42
PHGDH-202ENST00000369409 CCDC50Q8IVM0 306 aa17.66■□□□□ 0.42
PHGDH-202ENST00000369409 HDAC7Q8WUI4 952 aa17.66■□□□□ 0.42
PHGDH-202ENST00000369409 RXFP2Q8WXD0 754 aa17.66■□□□□ 0.42
PHGDH-202ENST00000369409 HSFY1Q96LI6 401 aa17.66■□□□□ 0.42
PHGDH-202ENST00000369409 TMEM209Q96SK2 561 aa17.66■□□□□ 0.42
PHGDH-202ENST00000369409 PRDM5Q9NQX1 630 aaPredicted RBP17.66■□□□□ 0.42
PHGDH-202ENST00000369409 MKI67P46013 3256 aaKnown RBP17.66■□□□□ 0.42
PHGDH-202ENST00000369409 GOLGA6L10A0A0M3HER8 536 aa17.65■□□□□ 0.42
PHGDH-202ENST00000369409 NRP1O14786 923 aa17.65■□□□□ 0.42
PHGDH-202ENST00000369409 KRT1P04264 644 aa17.65■□□□□ 0.42
PHGDH-202ENST00000369409 CLCN6P51797 869 aa17.65■□□□□ 0.42
PHGDH-202ENST00000369409 ZNF143P52747 638 aaPredicted RBP17.65■□□□□ 0.42
PHGDH-202ENST00000369409 SLC7A5Q01650 507 aa17.65■□□□□ 0.42
PHGDH-202ENST00000369409 ATP13A4Q4VNC1 1196 aa17.65■□□□□ 0.42
PHGDH-202ENST00000369409 ZFYVE27Q5T4F4 411 aa17.65■□□□□ 0.42
PHGDH-202ENST00000369409 THEM5Q8N1Q8 247 aa17.65■□□□□ 0.42
PHGDH-202ENST00000369409 ARFGAP1Q8N6T3 406 aa17.65■□□□□ 0.42
PHGDH-202ENST00000369409 ACSF2Q96CM8 615 aaPredicted RBP17.65■□□□□ 0.42
PHGDH-202ENST00000369409 VWCEQ96DN2 955 aa17.65■□□□□ 0.42
PHGDH-202ENST00000369409 MRPL9Q9BYD2 267 aaKnown RBP17.65■□□□□ 0.42
PHGDH-202ENST00000369409 RHOBTB2Q9BYZ6 727 aa17.65■□□□□ 0.42
PHGDH-202ENST00000369409 RAB21Q9UL25 225 aa17.65■□□□□ 0.42
PHGDH-202ENST00000369409 COL4A6Q14031 1691 aa17.65■□□□□ 0.42
PHGDH-202ENST00000369409 TCRBV7S2A1N4TA0A589 114 aa17.65■□□□□ 0.42
PHGDH-202ENST00000369409 TADA2AO75478 443 aa17.65■□□□□ 0.42
PHGDH-202ENST00000369409 ZMYND10O75800 440 aa17.65■□□□□ 0.42
PHGDH-202ENST00000369409 UPP2O95045 317 aa17.65■□□□□ 0.42
PHGDH-202ENST00000369409 PDGFRAP16234 1089 aa17.65■□□□□ 0.42
PHGDH-202ENST00000369409 CACNA2D1P54289 1103 aa17.65■□□□□ 0.42
PHGDH-202ENST00000369409 SLC25A11Q02978 314 aaKnown RBP17.65■□□□□ 0.42
PHGDH-202ENST00000369409 LRRC38Q5VT99 294 aa17.65■□□□□ 0.42
PHGDH-202ENST00000369409 NECAB2Q7Z6G3 386 aa17.65■□□□□ 0.42
PHGDH-202ENST00000369409 SMARCD1Q96GM5 515 aa17.65■□□□□ 0.42
PHGDH-202ENST00000369409 PKMYT1Q99640 499 aa17.65■□□□□ 0.42
PHGDH-202ENST00000369409 SMOQ99835 787 aa17.65■□□□□ 0.42
PHGDH-202ENST00000369409 CNPY3Q9BT09 278 aa17.65■□□□□ 0.42
PHGDH-202ENST00000369409 TMEM106CQ9BVX2 250 aa17.65■□□□□ 0.42
PHGDH-202ENST00000369409 PLEKHA4Q9H4M7 779 aa17.65■□□□□ 0.42
PHGDH-202ENST00000369409 TMEM30AQ9NV96 361 aa17.65■□□□□ 0.42
PHGDH-202ENST00000369409 TMLHEQ9NVH6 421 aa17.65■□□□□ 0.42
PHGDH-202ENST00000369409 DMGDHQ9UI17 866 aaKnown RBP17.65■□□□□ 0.42
PHGDH-202ENST00000369409 ADAM28Q9UKQ2 775 aa17.65■□□□□ 0.42
PHGDH-202ENST00000369409 RAD51CO43502 376 aa17.64■□□□□ 0.41
PHGDH-202ENST00000369409 TRAPPC3O43617 180 aa17.64■□□□□ 0.41
PHGDH-202ENST00000369409 RFC2P35250 354 aa17.64■□□□□ 0.41
PHGDH-202ENST00000369409 SLC11A1P49279 550 aa17.64■□□□□ 0.41
PHGDH-202ENST00000369409 RABGGTBP53611 331 aa17.64■□□□□ 0.41
PHGDH-202ENST00000369409 TSPY1Q01534 308 aa17.64■□□□□ 0.41
PHGDH-202ENST00000369409 IKBKEQ14164 716 aa17.64■□□□□ 0.41
PHGDH-202ENST00000369409 SMC1AQ14683 1233 aaKnown RBP17.64■□□□□ 0.41
PHGDH-202ENST00000369409 CDO1Q16878 200 aa17.64■□□□□ 0.41
PHGDH-202ENST00000369409 C15orf59Q2T9L4 293 aaPredicted RBP17.64■□□□□ 0.41
PHGDH-202ENST00000369409 FAM171BQ6P995 826 aa17.64■□□□□ 0.41
PHGDH-202ENST00000369409 SLC26A9Q7LBE3 791 aa17.64■□□□□ 0.41
PHGDH-202ENST00000369409 EXD1Q8NHP7 514 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms