RNA–Protein interactions for RNA: ENST00000368648.7

EBF3-202, Transcript of early B cell factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene EBF3, Length 4,375 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-202ENST00000368648 APOBEC3HQ6NTF7 200 aaKnown RBP11.24□□□□□ -0.61
EBF3-202ENST00000368648 ZNF570Q96NI8 536 aa11.24□□□□□ -0.61
EBF3-202ENST00000368648 TAAR1Q96RJ0 339 aa11.24□□□□□ -0.61
EBF3-202ENST00000368648 SEMA6AQ9H2E6 1030 aa11.24□□□□□ -0.61
EBF3-202ENST00000368648 NKX1-2Q9UD57 310 aaPredicted RBP11.24□□□□□ -0.61
EBF3-202ENST00000368648 TMCC1O94876 653 aa11.24□□□□□ -0.61
EBF3-202ENST00000368648 SP100P23497 879 aaPredicted RBP11.24□□□□□ -0.61
EBF3-202ENST00000368648 SMARCA1P28370 1054 aa11.24□□□□□ -0.61
EBF3-202ENST00000368648 ARL4AP40617 200 aa11.24□□□□□ -0.61
EBF3-202ENST00000368648 PKNOX1P55347 436 aa11.24□□□□□ -0.61
EBF3-202ENST00000368648 MRPS15P82914 257 aaKnown RBP11.24□□□□□ -0.61
EBF3-202ENST00000368648 SGSM1Q2NKQ1 1148 aa11.24□□□□□ -0.61
EBF3-202ENST00000368648 LPCAT4Q643R3 524 aa11.24□□□□□ -0.61
EBF3-202ENST00000368648 PALB2Q86YC2 1186 aa11.24□□□□□ -0.61
EBF3-202ENST00000368648 FBXL16Q8N461 479 aa11.24□□□□□ -0.61
EBF3-202ENST00000368648 EMC1Q8N766 993 aa11.24□□□□□ -0.61
EBF3-202ENST00000368648 RNF149Q8NC42 400 aa11.24□□□□□ -0.61
EBF3-202ENST00000368648 TAS1R2Q8TE23 839 aa11.24□□□□□ -0.61
EBF3-202ENST00000368648 NRBF2Q96F24 287 aa11.24□□□□□ -0.61
EBF3-202ENST00000368648 A1CFQ9NQ94 594 aaKnown RBP11.24□□□□□ -0.61
EBF3-202ENST00000368648 BTBD7Q9P203 1132 aa11.24□□□□□ -0.61
EBF3-202ENST00000368648 SLC12A6Q9UHW9 1150 aa11.24□□□□□ -0.61
EBF3-202ENST00000368648 HNRNPCL1O60812 293 aaKnown RBP11.24□□□□□ -0.61
EBF3-202ENST00000368648 RPS6KA3P51812 740 aa11.24□□□□□ -0.61
EBF3-202ENST00000368648 SOX10P56693 466 aa11.24□□□□□ -0.61
EBF3-202ENST00000368648 DUPD1Q68J44 220 aa11.24□□□□□ -0.61
EBF3-202ENST00000368648 C16orf46Q6P387 395 aa11.24□□□□□ -0.61
EBF3-202ENST00000368648 ARHGEF19Q8IW93 802 aa11.24□□□□□ -0.61
EBF3-202ENST00000368648 CERS5Q8N5B7 392 aa11.24□□□□□ -0.61
EBF3-202ENST00000368648 ATP6V1E2Q96A05 226 aa11.24□□□□□ -0.61
EBF3-202ENST00000368648 TMEM143Q96AN5 459 aa11.24□□□□□ -0.61
EBF3-202ENST00000368648 POLR3FQ9H1D9 316 aaPredicted RBP11.24□□□□□ -0.61
EBF3-202ENST00000368648 GTF3C4Q9UKN8 822 aa11.24□□□□□ -0.61
EBF3-202ENST00000368648 RBMX2Q9Y388 322 aaKnown RBP11.24□□□□□ -0.61
EBF3-202ENST00000368648 SNRPAP09012 282 aaKnown RBP11.23□□□□□ -0.61
EBF3-202ENST00000368648 CYP11B1P15538 503 aa11.23□□□□□ -0.61
EBF3-202ENST00000368648 RAG1P15918 1043 aa11.23□□□□□ -0.61
EBF3-202ENST00000368648 GLRBP48167 497 aa11.23□□□□□ -0.61
EBF3-202ENST00000368648 MAPK11Q15759 364 aa11.23□□□□□ -0.61
EBF3-202ENST00000368648 WASHC2DQ5SRD0 308 aa11.23□□□□□ -0.61
EBF3-202ENST00000368648 HGSNATQ68CP4 663 aa11.23□□□□□ -0.61
EBF3-202ENST00000368648 DSTYKQ6XUX3 929 aa11.23□□□□□ -0.61
EBF3-202ENST00000368648 C4orf50Q6ZRC1 276 aa11.23□□□□□ -0.61
EBF3-202ENST00000368648 CDC26Q8NHZ8 85 aa11.23□□□□□ -0.61
EBF3-202ENST00000368648 SYT17Q9BSW7 474 aa11.23□□□□□ -0.61
EBF3-202ENST00000368648 KLHL25Q9H0H3 589 aa11.23□□□□□ -0.61
EBF3-202ENST00000368648 PARVAQ9NVD7 372 aa11.23□□□□□ -0.61
EBF3-202ENST00000368648 RBAKQ9NYW8 714 aaPredicted RBP11.23□□□□□ -0.61
EBF3-202ENST00000368648 BAG5Q9UL15 447 aa11.23□□□□□ -0.61
EBF3-202ENST00000368648 DNPEPQ9ULA0 475 aa11.23□□□□□ -0.61
EBF3-202ENST00000368648 WASF2Q9Y6W5 498 aa11.23□□□□□ -0.61
EBF3-202ENST00000368648 VCAM1P19320 739 aa11.23□□□□□ -0.61
EBF3-202ENST00000368648 RPA1P27694 616 aa11.23□□□□□ -0.61
EBF3-202ENST00000368648 GNL1P36915 607 aaPredicted RBP11.23□□□□□ -0.61
EBF3-202ENST00000368648 ABCG1P45844 678 aa11.23□□□□□ -0.61
EBF3-202ENST00000368648 PHKA2P46019 1235 aa11.23□□□□□ -0.61
EBF3-202ENST00000368648 MRPS22P82650 360 aaKnown RBP11.23□□□□□ -0.61
EBF3-202ENST00000368648 FSTL1Q12841 308 aa11.23□□□□□ -0.61
EBF3-202ENST00000368648 EFHC1Q5JVL4 640 aa11.23□□□□□ -0.61
EBF3-202ENST00000368648 GNASQ5JWF2 1037 aa11.23□□□□□ -0.61
EBF3-202ENST00000368648 RFWD3Q6PCD5 774 aa11.23□□□□□ -0.61
EBF3-202ENST00000368648 CPNE8Q86YQ8 564 aa11.23□□□□□ -0.61
EBF3-202ENST00000368648 VGLL2Q8N8G2 317 aa11.23□□□□□ -0.61
EBF3-202ENST00000368648 LNX1Q8TBB1 728 aaPredicted RBP11.23□□□□□ -0.61
EBF3-202ENST00000368648 KCNK16Q96T55 309 aa11.23□□□□□ -0.61
EBF3-202ENST00000368648 KLHL4Q9C0H6 718 aa11.23□□□□□ -0.61
EBF3-202ENST00000368648 POLIQ9UNA4 740 aa11.23□□□□□ -0.61
EBF3-202ENST00000368648 ANKRD63C9JTQ0 380 aa11.23□□□□□ -0.61
EBF3-202ENST00000368648 DCXO43602 365 aa11.23□□□□□ -0.61
EBF3-202ENST00000368648 SRGAP2BP0DMP2 458 aa11.23□□□□□ -0.61
EBF3-202ENST00000368648 EFTUD2Q15029 972 aaKnown RBP eCLIP11.23□□□□□ -0.61
EBF3-202ENST00000368648 GPC2Q8N158 579 aa11.23□□□□□ -0.61
EBF3-202ENST00000368648 ACTL9Q8TC94 416 aa11.23□□□□□ -0.61
EBF3-202ENST00000368648 RMI1Q9H9A7 625 aa11.23□□□□□ -0.61
EBF3-202ENST00000368648 ARL8BQ9NVJ2 186 aa11.23□□□□□ -0.61
EBF3-202ENST00000368648 M0QYV0 167 aa11.23□□□□□ -0.61
EBF3-202ENST00000368648 ATP6V1G1O75348 118 aa11.23□□□□□ -0.61
EBF3-202ENST00000368648 PARNO95453 639 aaKnown RBP11.23□□□□□ -0.61
EBF3-202ENST00000368648 HSPA8P11142 646 aaKnown RBP11.23□□□□□ -0.61
EBF3-202ENST00000368648 WDR72Q3MJ13 1102 aa11.23□□□□□ -0.61
EBF3-202ENST00000368648 SPDYE2Q495Y8 402 aa11.23□□□□□ -0.61
EBF3-202ENST00000368648 CWF19L1Q69YN2 538 aaKnown RBP11.23□□□□□ -0.61
EBF3-202ENST00000368648 LRRC8BQ6P9F7 803 aa11.23□□□□□ -0.61
EBF3-202ENST00000368648 DENND5BQ6ZUT9 1274 aa11.23□□□□□ -0.61
EBF3-202ENST00000368648 PID1Q7Z2X4 250 aa11.23□□□□□ -0.61
EBF3-202ENST00000368648 ALYREFQ86V81 257 aaKnown RBP11.23□□□□□ -0.61
EBF3-202ENST00000368648 NLGN2Q8NFZ4 835 aa11.23□□□□□ -0.61
EBF3-202ENST00000368648 RFWD2Q8NHY2 731 aa11.23□□□□□ -0.61
EBF3-202ENST00000368648 WDR60Q8WVS4 1066 aa11.23□□□□□ -0.61
EBF3-202ENST00000368648 SEMA4DQ92854 862 aa11.23□□□□□ -0.61
EBF3-202ENST00000368648 MECRQ9BV79 373 aa11.23□□□□□ -0.61
EBF3-202ENST00000368648 PIF1Q9H611 641 aa11.23□□□□□ -0.61
EBF3-202ENST00000368648 PTPRHQ9HD43 1115 aa11.23□□□□□ -0.61
EBF3-202ENST00000368648 EPHA7Q15375 998 aa11.22□□□□□ -0.61
EBF3-202ENST00000368648 TRIM16LQ309B1 348 aa11.22□□□□□ -0.61
EBF3-202ENST00000368648 TTC33Q6PID6 262 aaPredicted RBP11.22□□□□□ -0.61
EBF3-202ENST00000368648 LPCAT2Q7L5N7 544 aa11.22□□□□□ -0.61
EBF3-202ENST00000368648 TRIM74Q86UV6 250 aa11.22□□□□□ -0.61
EBF3-202ENST00000368648 TRIM73Q86UV7 250 aa11.22□□□□□ -0.61
EBF3-202ENST00000368648 TTC13Q8NBP0 860 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms