RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 TTLL2Q9BWV7 592 aa17.11■□□□□ 0.33
CKS1B-202ENST00000368436 MAGEF1Q9HAY2 307 aa17.11■□□□□ 0.33
CKS1B-202ENST00000368436 CLIC2O15247 247 aa17.1■□□□□ 0.33
CKS1B-202ENST00000368436 RPP40O75818 363 aaKnown RBP17.1■□□□□ 0.33
CKS1B-202ENST00000368436 STAU1O95793 577 aaKnown RBP17.1■□□□□ 0.33
CKS1B-202ENST00000368436 DLATP10515 647 aaKnown RBP17.1■□□□□ 0.33
CKS1B-202ENST00000368436 TNNI1P19237 187 aa17.1■□□□□ 0.33
CKS1B-202ENST00000368436 RAP1GAPP47736 663 aa17.1■□□□□ 0.33
CKS1B-202ENST00000368436 PDE6CP51160 858 aa17.1■□□□□ 0.33
CKS1B-202ENST00000368436 USP46P62068 366 aa17.1■□□□□ 0.33
CKS1B-202ENST00000368436 NOP14P78316 857 aaKnown RBP17.1■□□□□ 0.33
CKS1B-202ENST00000368436 ZXDBP98169 803 aa17.1■□□□□ 0.33
CKS1B-202ENST00000368436 KCNB1Q14721 858 aa17.1■□□□□ 0.33
CKS1B-202ENST00000368436 BMT2Q1RMZ1 405 aa17.1■□□□□ 0.33
CKS1B-202ENST00000368436 SYT13Q7L8C5 426 aa17.1■□□□□ 0.33
CKS1B-202ENST00000368436 C12orf56Q8IXR9 622 aa17.1■□□□□ 0.33
CKS1B-202ENST00000368436 XXYLT1Q8NBI6 393 aa17.1■□□□□ 0.33
CKS1B-202ENST00000368436 ZNF516Q92618 1163 aa17.1■□□□□ 0.33
CKS1B-202ENST00000368436 ZC3H10Q96K80 434 aaKnown RBP17.1■□□□□ 0.33
CKS1B-202ENST00000368436 C8orf48Q96LL4 319 aa17.1■□□□□ 0.33
CKS1B-202ENST00000368436 FNBP1Q96RU3 617 aa17.1■□□□□ 0.33
CKS1B-202ENST00000368436 GZF1Q9H116 711 aaPredicted RBP17.1■□□□□ 0.33
CKS1B-202ENST00000368436 LINC00597Q9H2U6 94 aa17.1■□□□□ 0.33
CKS1B-202ENST00000368436 SNX25Q9H3E2 840 aa17.1■□□□□ 0.33
CKS1B-202ENST00000368436 POLR3BQ9NW08 1133 aaPredicted RBP17.1■□□□□ 0.33
CKS1B-202ENST00000368436 EHD2Q9NZN4 543 aa17.1■□□□□ 0.33
CKS1B-202ENST00000368436 TRIM66O15016 1216 aa17.09■□□□□ 0.33
CKS1B-202ENST00000368436 AXIN1O15169 862 aa17.09■□□□□ 0.33
CKS1B-202ENST00000368436 POLR2DO15514 142 aaKnown RBP17.09■□□□□ 0.33
CKS1B-202ENST00000368436 GDF9O60383 454 aa17.09■□□□□ 0.33
CKS1B-202ENST00000368436 EPN2O95208 641 aa17.09■□□□□ 0.33
CKS1B-202ENST00000368436 ANXA13P27216 316 aa17.09■□□□□ 0.33
CKS1B-202ENST00000368436 PPP3CCP48454 512 aa17.09■□□□□ 0.33
CKS1B-202ENST00000368436 CYP2J2P51589 502 aa17.09■□□□□ 0.33
CKS1B-202ENST00000368436 NR1H3Q13133 447 aa17.09■□□□□ 0.33
CKS1B-202ENST00000368436 MDH1BQ5I0G3 518 aa17.09■□□□□ 0.33
CKS1B-202ENST00000368436 KBTBD6Q86V97 674 aa17.09■□□□□ 0.33
CKS1B-202ENST00000368436 NELFCDQ8IXH7 590 aa17.09■□□□□ 0.33
CKS1B-202ENST00000368436 KIAA1958Q8N8K9 716 aa17.09■□□□□ 0.33
CKS1B-202ENST00000368436 SNX21Q969T3 373 aa17.09■□□□□ 0.33
CKS1B-202ENST00000368436 CCDC127Q96BQ5 260 aa17.09■□□□□ 0.33
CKS1B-202ENST00000368436 TRPM5Q9NZQ8 1165 aa17.09■□□□□ 0.33
CKS1B-202ENST00000368436 CGNQ9P2M7 1197 aaKnown RBP17.09■□□□□ 0.33
CKS1B-202ENST00000368436 PVALEFA0A1B0GWK0 134 aa17.08■□□□□ 0.32
CKS1B-202ENST00000368436 ZNF840PA6NDX5 716 aa17.08■□□□□ 0.32
CKS1B-202ENST00000368436 LEFTY2O00292 366 aa17.08■□□□□ 0.32
CKS1B-202ENST00000368436 OLFM2O95897 454 aa17.08■□□□□ 0.32
CKS1B-202ENST00000368436 PDIA4P13667 645 aaKnown RBP17.08■□□□□ 0.32
CKS1B-202ENST00000368436 PTPN1P18031 435 aaKnown RBP17.08■□□□□ 0.32
CKS1B-202ENST00000368436 CASP1P29466 404 aa17.08■□□□□ 0.32
CKS1B-202ENST00000368436 ATICP31939 592 aa17.08■□□□□ 0.32
CKS1B-202ENST00000368436 TNNC1P63316 161 aa17.08■□□□□ 0.32
CKS1B-202ENST00000368436 SLC7A9P82251 487 aa17.08■□□□□ 0.32
CKS1B-202ENST00000368436 WDR72Q3MJ13 1102 aa17.08■□□□□ 0.32
CKS1B-202ENST00000368436 HS2ST1Q7LGA3 356 aa17.08■□□□□ 0.32
CKS1B-202ENST00000368436 TTC16Q8NEE8 873 aa17.08■□□□□ 0.32
CKS1B-202ENST00000368436 OR6B3Q8NGW1 331 aa17.08■□□□□ 0.32
CKS1B-202ENST00000368436 RPLP0P6Q8NHW5 317 aa17.08■□□□□ 0.32
CKS1B-202ENST00000368436 RNF38Q9H0F5 515 aa17.08■□□□□ 0.32
CKS1B-202ENST00000368436 XYLT2Q9H1B5 865 aa17.08■□□□□ 0.32
CKS1B-202ENST00000368436 BLZF1Q9H2G9 400 aa17.08■□□□□ 0.32
CKS1B-202ENST00000368436 ARRDC1-AS1Q9H2J1 176 aa17.08■□□□□ 0.32
CKS1B-202ENST00000368436 EBF1Q9UH73 591 aa17.08■□□□□ 0.32
CKS1B-202ENST00000368436 SPTBN2O15020 2390 aa17.07■□□□□ 0.32
CKS1B-202ENST00000368436 F8VP50 259 aa17.07■□□□□ 0.32
CKS1B-202ENST00000368436 NFATC1O95644 943 aa17.07■□□□□ 0.32
CKS1B-202ENST00000368436 ZNF806P0C7X5 589 aa17.07■□□□□ 0.32
CKS1B-202ENST00000368436 CCDC192P0DO97 292 aa17.07■□□□□ 0.32
CKS1B-202ENST00000368436 LIMK1P53667 647 aa17.07■□□□□ 0.32
CKS1B-202ENST00000368436 CACNA2D1P54289 1103 aa17.07■□□□□ 0.32
CKS1B-202ENST00000368436 MYL6P60660 151 aa17.07■□□□□ 0.32
CKS1B-202ENST00000368436 GAB4Q2WGN9 574 aa17.07■□□□□ 0.32
CKS1B-202ENST00000368436 RESP18Q5W5W9 173 aa17.07■□□□□ 0.32
CKS1B-202ENST00000368436 HHIPQ96QV1 700 aa17.07■□□□□ 0.32
CKS1B-202ENST00000368436 ELOVL4Q9GZR5 314 aa17.07■□□□□ 0.32
CKS1B-202ENST00000368436 DPEP3Q9H4B8 488 aa17.07■□□□□ 0.32
CKS1B-202ENST00000368436 VRTNQ9H8Y1 702 aa17.07■□□□□ 0.32
CKS1B-202ENST00000368436 TMEM30AQ9NV96 361 aa17.07■□□□□ 0.32
CKS1B-202ENST00000368436 PCDHA7Q9UN72 937 aa17.07■□□□□ 0.32
CKS1B-202ENST00000368436 PCDHGA5Q9Y5G8 931 aa17.07■□□□□ 0.32
CKS1B-202ENST00000368436 SDK1Q7Z5N4 2213 aa17.06■□□□□ 0.32
CKS1B-202ENST00000368436 APBB3O95704 486 aa17.06■□□□□ 0.32
CKS1B-202ENST00000368436 OAS1P00973 400 aaKnown RBP17.06■□□□□ 0.32
CKS1B-202ENST00000368436 ADRB1P08588 477 aa17.06■□□□□ 0.32
CKS1B-202ENST00000368436 ZSCAN22P10073 491 aaPredicted RBP17.06■□□□□ 0.32
CKS1B-202ENST00000368436 OPRD1P41143 372 aa17.06■□□□□ 0.32
CKS1B-202ENST00000368436 TAF10Q12962 218 aa17.06■□□□□ 0.32
CKS1B-202ENST00000368436 TRPC3Q13507 836 aa17.06■□□□□ 0.32
CKS1B-202ENST00000368436 CUL4BQ13620 913 aa17.06■□□□□ 0.32
CKS1B-202ENST00000368436 DMC1Q14565 340 aa17.06■□□□□ 0.32
CKS1B-202ENST00000368436 KNOP1Q1ED39 458 aaKnown RBP17.06■□□□□ 0.32
CKS1B-202ENST00000368436 PLA2G2CQ5R387 149 aa17.06■□□□□ 0.32
CKS1B-202ENST00000368436 ADGRG2Q8IZP9 1017 aa17.06■□□□□ 0.32
CKS1B-202ENST00000368436 B3GALNT2Q8NCR0 500 aa17.06■□□□□ 0.32
CKS1B-202ENST00000368436 CCDC26Q8TAB7 109 aa17.06■□□□□ 0.32
CKS1B-202ENST00000368436 PLEKHO2Q8TD55 490 aa17.06■□□□□ 0.32
CKS1B-202ENST00000368436 SYAP1Q96A49 352 aaPredicted RBP17.06■□□□□ 0.32
CKS1B-202ENST00000368436 ACDQ96AP0 544 aa17.06■□□□□ 0.32
CKS1B-202ENST00000368436 B3GNT5Q9BYG0 378 aa17.06■□□□□ 0.32
CKS1B-202ENST00000368436 ZNF518BQ9C0D4 1074 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms