RNA–Protein interactions for RNA: ENST00000368311.5

SSR2-202, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 1 (best)

Gene SSR2, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-202ENST00000368311 H2AFYO75367 372 aaKnown RBP8.66□□□□□ -1.02
SSR2-202ENST00000368311 SUN1O94901 812 aa8.66□□□□□ -1.02
SSR2-202ENST00000368311 HDCP19113 662 aa8.66□□□□□ -1.02
SSR2-202ENST00000368311 ARHGAP1Q07960 439 aa8.66□□□□□ -1.02
SSR2-202ENST00000368311 ELP6Q0PNE2 266 aa8.66□□□□□ -1.02
SSR2-202ENST00000368311 TMEM119Q4V9L6 283 aa8.66□□□□□ -1.02
SSR2-202ENST00000368311 C8orf74Q6P047 294 aa8.66□□□□□ -1.02
SSR2-202ENST00000368311 SH3BP5LQ7L8J4 393 aa8.66□□□□□ -1.02
SSR2-202ENST00000368311 C7orf57Q8NEG2 295 aa8.66□□□□□ -1.02
SSR2-202ENST00000368311 MCOLN3Q8TDD5 553 aa8.66□□□□□ -1.02
SSR2-202ENST00000368311 SLC22A17Q8WUG5 538 aa8.66□□□□□ -1.02
SSR2-202ENST00000368311 CASKIN2Q8WXE0 1202 aa8.66□□□□□ -1.02
SSR2-202ENST00000368311 HAPLN3Q96S86 360 aa8.66□□□□□ -1.02
SSR2-202ENST00000368311 NUP85Q9BW27 656 aa8.66□□□□□ -1.02
SSR2-202ENST00000368311 NDEL1Q9GZM8 345 aa8.66□□□□□ -1.02
SSR2-202ENST00000368311 ZDHHC7Q9NXF8 308 aa8.66□□□□□ -1.02
SSR2-202ENST00000368311 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.66□□□□□ -1.02
SSR2-202ENST00000368311 BFARQ9NZS9 450 aa8.66□□□□□ -1.02
SSR2-202ENST00000368311 SOD2P04179 222 aa8.66□□□□□ -1.02
SSR2-202ENST00000368311 PDGFRBP09619 1106 aa8.66□□□□□ -1.02
SSR2-202ENST00000368311 ADCY8P40145 1251 aa8.66□□□□□ -1.02
SSR2-202ENST00000368311 GPR158Q5T848 1215 aa8.66□□□□□ -1.02
SSR2-202ENST00000368311 KCNT2Q6UVM3 1135 aa8.66□□□□□ -1.02
SSR2-202ENST00000368311 ZNF720Q7Z2F6 126 aa8.66□□□□□ -1.02
SSR2-202ENST00000368311 NPLOC4Q8TAT6 608 aa8.66□□□□□ -1.02
SSR2-202ENST00000368311 ACO2Q99798 780 aaKnown RBP8.66□□□□□ -1.02
SSR2-202ENST00000368311 CIPCQ9C0C6 399 aa8.66□□□□□ -1.02
SSR2-202ENST00000368311 SLC39A8Q9C0K1 460 aa8.66□□□□□ -1.02
SSR2-202ENST00000368311 CCDC66A2RUB6 948 aa8.66□□□□□ -1.02
SSR2-202ENST00000368311 C2orf81A6NN90 581 aa8.66□□□□□ -1.02
SSR2-202ENST00000368311 FAM47E-STBD1D6RA91 191 aa8.66□□□□□ -1.02
SSR2-202ENST00000368311 RBAK-RBAKDNI3L0D1 243 aa8.66□□□□□ -1.02
SSR2-202ENST00000368311 CREB3O43889 395 aa8.66□□□□□ -1.02
SSR2-202ENST00000368311 CTSEP14091 401 aa8.66□□□□□ -1.02
SSR2-202ENST00000368311 BMPR1AP36894 532 aa8.66□□□□□ -1.02
SSR2-202ENST00000368311 HNRNPH2P55795 449 aaKnown RBP8.66□□□□□ -1.02
SSR2-202ENST00000368311 BCAR1P56945 870 aa8.66□□□□□ -1.02
SSR2-202ENST00000368311 LYPLAL1Q5VWZ2 237 aa8.66□□□□□ -1.02
SSR2-202ENST00000368311 SLC36A4Q6YBV0 504 aa8.66□□□□□ -1.02
SSR2-202ENST00000368311 CCDC60Q8IWA6 550 aaPredicted RBP8.66□□□□□ -1.02
SSR2-202ENST00000368311 IFT81Q8WYA0 676 aa8.66□□□□□ -1.02
SSR2-202ENST00000368311 CBX8Q9HC52 389 aa8.66□□□□□ -1.02
SSR2-202ENST00000368311 RGS18Q9NS28 235 aa8.66□□□□□ -1.02
SSR2-202ENST00000368311 NMRK1Q9NWW6 199 aa8.66□□□□□ -1.02
SSR2-202ENST00000368311 INTUQ9ULD6 942 aa8.66□□□□□ -1.02
SSR2-202ENST00000368311 AAR2Q9Y312 384 aaKnown RBP8.66□□□□□ -1.02
SSR2-202ENST00000368311 INPP4BO15327 924 aa8.65□□□□□ -1.02
SSR2-202ENST00000368311 SYN1P17600 705 aa8.65□□□□□ -1.02
SSR2-202ENST00000368311 ITGAXP20702 1163 aa8.65□□□□□ -1.02
SSR2-202ENST00000368311 PTK2BQ14289 1009 aa8.65□□□□□ -1.02
SSR2-202ENST00000368311 PALB2Q86YC2 1186 aa8.65□□□□□ -1.02
SSR2-202ENST00000368311 DENND1AQ8TEH3 1009 aa8.65□□□□□ -1.02
SSR2-202ENST00000368311 CYFIP2Q96F07 1278 aa8.65□□□□□ -1.02
SSR2-202ENST00000368311 SMC6Q96SB8 1091 aa8.65□□□□□ -1.02
SSR2-202ENST00000368311 GABRQQ9UN88 632 aa8.65□□□□□ -1.02
SSR2-202ENST00000368311 NID2Q14112 1375 aa8.65□□□□□ -1.02
SSR2-202ENST00000368311 IQCF3P0C7M6 154 aa8.65□□□□□ -1.02
SSR2-202ENST00000368311 KCNA2P16389 499 aa8.65□□□□□ -1.02
SSR2-202ENST00000368311 RHOAP61586 193 aa8.65□□□□□ -1.02
SSR2-202ENST00000368311 FAM193AP78312 1265 aa8.65□□□□□ -1.02
SSR2-202ENST00000368311 ZBTB16Q05516 673 aa8.65□□□□□ -1.02
SSR2-202ENST00000368311 SEPT6Q14141 434 aa8.65□□□□□ -1.02
SSR2-202ENST00000368311 MFN1Q8IWA4 741 aa8.65□□□□□ -1.02
SSR2-202ENST00000368311 DBF4BQ8NFT6 615 aa8.65□□□□□ -1.02
SSR2-202ENST00000368311 FBXL18Q96ME1 805 aa8.65□□□□□ -1.02
SSR2-202ENST00000368311 NCKIPSDQ9NZQ3 722 aa8.65□□□□□ -1.02
SSR2-202ENST00000368311 VPS51Q9UID3 782 aa8.65□□□□□ -1.02
SSR2-202ENST00000368311 A0A088AWK7 358 aa8.65□□□□□ -1.03
SSR2-202ENST00000368311 LRRN2O75325 713 aa8.65□□□□□ -1.03
SSR2-202ENST00000368311 ZNF10P21506 573 aaPredicted RBP8.65□□□□□ -1.03
SSR2-202ENST00000368311 WHAMMP3Q1A5X7 153 aa8.65□□□□□ -1.03
SSR2-202ENST00000368311 OXR1Q8N573 874 aa8.65□□□□□ -1.03
SSR2-202ENST00000368311 AGPAT1Q99943 283 aa8.65□□□□□ -1.03
SSR2-202ENST00000368311 ACBD6Q9BR61 282 aa8.65□□□□□ -1.03
SSR2-202ENST00000368311 FAM96AQ9H5X1 160 aa8.65□□□□□ -1.03
SSR2-202ENST00000368311 MRGBPQ9NV56 204 aa8.65□□□□□ -1.03
SSR2-202ENST00000368311 KIAA0355O15063 1070 aa8.65□□□□□ -1.03
SSR2-202ENST00000368311 SNX2O60749 519 aa8.65□□□□□ -1.03
SSR2-202ENST00000368311 BMP10O95393 424 aa8.65□□□□□ -1.03
SSR2-202ENST00000368311 PDGFRAP16234 1089 aa8.65□□□□□ -1.03
SSR2-202ENST00000368311 ROR1Q01973 937 aa8.65□□□□□ -1.03
SSR2-202ENST00000368311 KIAA1324Q6UXG2 1013 aaKnown RBP8.65□□□□□ -1.03
SSR2-202ENST00000368311 CCDC186Q7Z3E2 898 aa8.65□□□□□ -1.03
SSR2-202ENST00000368311 CLEC4DQ8WXI8 215 aa8.65□□□□□ -1.03
SSR2-202ENST00000368311 DHX35Q9H5Z1 703 aaKnown RBP8.65□□□□□ -1.03
SSR2-202ENST00000368311 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.65□□□□□ -1.03
SSR2-202ENST00000368311 FZD1Q9UP38 647 aa8.65□□□□□ -1.03
SSR2-202ENST00000368311 DFFAO00273 331 aa8.64□□□□□ -1.03
SSR2-202ENST00000368311 IFRD1O00458 451 aaPredicted RBP8.64□□□□□ -1.03
SSR2-202ENST00000368311 IRAK2O43187 625 aa8.64□□□□□ -1.03
SSR2-202ENST00000368311 SLITRK3O94933 977 aa8.64□□□□□ -1.03
SSR2-202ENST00000368311 ZRANB2O95218 330 aaKnown RBP eCLIP8.64□□□□□ -1.03
SSR2-202ENST00000368311 ECEL1O95672 775 aa8.64□□□□□ -1.03
SSR2-202ENST00000368311 SERPINA4P29622 427 aa8.64□□□□□ -1.03
SSR2-202ENST00000368311 NCKAP1LP55160 1127 aa8.64□□□□□ -1.03
SSR2-202ENST00000368311 MESDQ14696 234 aa8.64□□□□□ -1.03
SSR2-202ENST00000368311 TBCCQ15814 346 aa8.64□□□□□ -1.03
SSR2-202ENST00000368311 TMTC4Q5T4D3 741 aa8.64□□□□□ -1.03
SSR2-202ENST00000368311 NAPEPLDQ6IQ20 393 aa8.64□□□□□ -1.03
SSR2-202ENST00000368311 FAM174AQ8TBP5 190 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms