RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 PRAMEF12O95522 483 aa15.59■□□□□ 0.09
SF3B5-201ENST00000367569 LMNAP02545 664 aaKnown RBP15.59■□□□□ 0.09
SF3B5-201ENST00000367569 GTF2H1P32780 548 aa15.59■□□□□ 0.09
SF3B5-201ENST00000367569 NLRP12P59046 1061 aa15.59■□□□□ 0.09
SF3B5-201ENST00000367569 USP46P62068 366 aa15.59■□□□□ 0.09
SF3B5-201ENST00000367569 SMARCB1Q12824 385 aa15.59■□□□□ 0.09
SF3B5-201ENST00000367569 CFAP221Q4G0U5 840 aa15.59■□□□□ 0.09
SF3B5-201ENST00000367569 GPR158Q5T848 1215 aa15.59■□□□□ 0.09
SF3B5-201ENST00000367569 TPRG1Q6ZUI0 275 aa15.59■□□□□ 0.09
SF3B5-201ENST00000367569 FILIP1Q7Z7B0 1213 aa15.59■□□□□ 0.09
SF3B5-201ENST00000367569 C12orf29Q8N999 325 aa15.59■□□□□ 0.09
SF3B5-201ENST00000367569 TTC16Q8NEE8 873 aa15.59■□□□□ 0.09
SF3B5-201ENST00000367569 ZSCAN18Q8TBC5 510 aaPredicted RBP15.59■□□□□ 0.09
SF3B5-201ENST00000367569 RSPRY1Q96DX4 576 aa15.59■□□□□ 0.09
SF3B5-201ENST00000367569 GCNAQ96QF7 691 aa15.59■□□□□ 0.09
SF3B5-201ENST00000367569 OSBPL6Q9BZF3 934 aa15.59■□□□□ 0.09
SF3B5-201ENST00000367569 ELOVL4Q9GZR5 314 aa15.59■□□□□ 0.09
SF3B5-201ENST00000367569 SEMA4AQ9H3S1 761 aa15.59■□□□□ 0.09
SF3B5-201ENST00000367569 ABCB6Q9NP58 842 aa15.59■□□□□ 0.09
SF3B5-201ENST00000367569 HEBP1Q9NRV9 189 aa15.59■□□□□ 0.09
SF3B5-201ENST00000367569 HSFX1Q9UBD0 423 aa15.59■□□□□ 0.09
SF3B5-201ENST00000367569 DNAH14Q0VDD8 3507 aa15.59■□□□□ 0.09
SF3B5-201ENST00000367569 TARSP26639 723 aaKnown RBP15.58■□□□□ 0.08
SF3B5-201ENST00000367569 ANXA13P27216 316 aa15.58■□□□□ 0.08
SF3B5-201ENST00000367569 RPL10AP62906 217 aaKnown RBP15.58■□□□□ 0.08
SF3B5-201ENST00000367569 TPD52L1Q16890 204 aaPredicted RBP15.58■□□□□ 0.08
SF3B5-201ENST00000367569 TMEM150AQ86TG1 271 aa15.58■□□□□ 0.08
SF3B5-201ENST00000367569 TRIM59Q8IWR1 403 aa15.58■□□□□ 0.08
SF3B5-201ENST00000367569 SLC2A14Q8TDB8 520 aa15.58■□□□□ 0.08
SF3B5-201ENST00000367569 WHAMMQ8TF30 809 aa15.58■□□□□ 0.08
SF3B5-201ENST00000367569 KAT5Q92993 513 aa15.58■□□□□ 0.08
SF3B5-201ENST00000367569 FUBP3Q96I24 572 aaKnown RBP eCLIP15.58■□□□□ 0.08
SF3B5-201ENST00000367569 ASB16Q96NS5 453 aa15.58■□□□□ 0.08
SF3B5-201ENST00000367569 METTL14Q9HCE5 456 aaKnown RBP15.58■□□□□ 0.08
SF3B5-201ENST00000367569 ZFP14Q9HCL3 533 aa15.58■□□□□ 0.08
SF3B5-201ENST00000367569 TRPC7Q9HCX4 862 aa15.58■□□□□ 0.08
SF3B5-201ENST00000367569 SPATA6Q9NWH7 488 aaPredicted RBP15.58■□□□□ 0.08
SF3B5-201ENST00000367569 ASB3Q9Y575 518 aa15.58■□□□□ 0.08
SF3B5-201ENST00000367569 CALCAP01258 141 aa15.57■□□□□ 0.08
SF3B5-201ENST00000367569 APBA1Q02410 837 aa15.57■□□□□ 0.08
SF3B5-201ENST00000367569 ENPEPQ07075 957 aa15.57■□□□□ 0.08
SF3B5-201ENST00000367569 FZD5Q13467 585 aa15.57■□□□□ 0.08
SF3B5-201ENST00000367569 MAPRE1Q15691 268 aaKnown RBP15.57■□□□□ 0.08
SF3B5-201ENST00000367569 WDR44Q5JSH3 913 aa15.57■□□□□ 0.08
SF3B5-201ENST00000367569 TXNDC8Q6A555 127 aa15.57■□□□□ 0.08
SF3B5-201ENST00000367569 C11orf57Q6ZUT1 292 aaPredicted RBP15.57■□□□□ 0.08
SF3B5-201ENST00000367569 PAQR9Q6ZVX9 377 aa15.57■□□□□ 0.08
SF3B5-201ENST00000367569 ARHGEF19Q8IW93 802 aa15.57■□□□□ 0.08
SF3B5-201ENST00000367569 FUKQ8N0W3 1084 aa15.57■□□□□ 0.08
SF3B5-201ENST00000367569 MLKLQ8NB16 471 aa15.57■□□□□ 0.08
SF3B5-201ENST00000367569 LEMD2Q8NC56 503 aa15.57■□□□□ 0.08
SF3B5-201ENST00000367569 KCNK16Q96T55 309 aa15.57■□□□□ 0.08
SF3B5-201ENST00000367569 BRD9Q9H8M2 597 aa15.57■□□□□ 0.08
SF3B5-201ENST00000367569 CISHQ9NSE2 258 aa15.57■□□□□ 0.08
SF3B5-201ENST00000367569 LAMTOR5O43504 91 aa15.56■□□□□ 0.08
SF3B5-201ENST00000367569 CILPO75339 1184 aa15.56■□□□□ 0.08
SF3B5-201ENST00000367569 AP1G2O75843 785 aa15.56■□□□□ 0.08
SF3B5-201ENST00000367569 BEST1O76090 585 aa15.56■□□□□ 0.08
SF3B5-201ENST00000367569 NOL4O94818 638 aa15.56■□□□□ 0.08
SF3B5-201ENST00000367569 CSH1P0DML2 217 aa15.56■□□□□ 0.08
SF3B5-201ENST00000367569 CSH2P0DML3 217 aa15.56■□□□□ 0.08
SF3B5-201ENST00000367569 MAGEA11P43364 429 aa15.56■□□□□ 0.08
SF3B5-201ENST00000367569 INCA1Q0VD86 236 aa15.56■□□□□ 0.08
SF3B5-201ENST00000367569 KCNH2Q12809 1159 aa15.56■□□□□ 0.08
SF3B5-201ENST00000367569 CUL2Q13617 745 aa15.56■□□□□ 0.08
SF3B5-201ENST00000367569 ZC3H14Q6PJT7 736 aaKnown RBP15.56■□□□□ 0.08
SF3B5-201ENST00000367569 VITQ6UXI7 678 aa15.56■□□□□ 0.08
SF3B5-201ENST00000367569 MAB21L3Q8N8X9 362 aa15.56■□□□□ 0.08
SF3B5-201ENST00000367569 DNASE1L2Q92874 299 aa15.56■□□□□ 0.08
SF3B5-201ENST00000367569 SMARCD2Q92925 531 aa15.56■□□□□ 0.08
SF3B5-201ENST00000367569 CLDN23Q96B33 292 aa15.56■□□□□ 0.08
SF3B5-201ENST00000367569 TNIP3Q96KP6 325 aa15.56■□□□□ 0.08
SF3B5-201ENST00000367569 NELL2Q99435 816 aa15.56■□□□□ 0.08
SF3B5-201ENST00000367569 TRMT61BQ9BVS5 477 aaKnown RBP15.56■□□□□ 0.08
SF3B5-201ENST00000367569 TMEM63CQ9P1W3 806 aa15.56■□□□□ 0.08
SF3B5-201ENST00000367569 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.56■□□□□ 0.08
SF3B5-201ENST00000367569 FRYLO94915 3013 aa15.56■□□□□ 0.08
SF3B5-201ENST00000367569 CEP250Q9BV73 2442 aa15.55■□□□□ 0.08
SF3B5-201ENST00000367569 ATP8B3O60423 1300 aa15.55■□□□□ 0.08
SF3B5-201ENST00000367569 MBD3O95983 291 aa15.55■□□□□ 0.08
SF3B5-201ENST00000367569 AFPP02771 609 aaKnown RBP15.55■□□□□ 0.08
SF3B5-201ENST00000367569 F11P03951 625 aa15.55■□□□□ 0.08
SF3B5-201ENST00000367569 CCDC192P0DO97 292 aa15.55■□□□□ 0.08
SF3B5-201ENST00000367569 CDC25CP30307 473 aa15.55■□□□□ 0.08
SF3B5-201ENST00000367569 GDI1P31150 447 aa15.55■□□□□ 0.08
SF3B5-201ENST00000367569 MTIF2P46199 727 aaKnown RBP15.55■□□□□ 0.08
SF3B5-201ENST00000367569 MAP3K7CLP57077 242 aa15.55■□□□□ 0.08
SF3B5-201ENST00000367569 MCCD1P59942 119 aaPredicted RBP15.55■□□□□ 0.08
SF3B5-201ENST00000367569 CSTF1Q05048 431 aaKnown RBP15.55■□□□□ 0.08
SF3B5-201ENST00000367569 ZNF528Q3MIS6 628 aa15.55■□□□□ 0.08
SF3B5-201ENST00000367569 ARHGAP15Q53QZ3 475 aa15.55■□□□□ 0.08
SF3B5-201ENST00000367569 VSTM1Q6UX27 236 aa15.55■□□□□ 0.08
SF3B5-201ENST00000367569 ZNF852Q6ZMS4 543 aa15.55■□□□□ 0.08
SF3B5-201ENST00000367569 RRAGAQ7L523 313 aa15.55■□□□□ 0.08
SF3B5-201ENST00000367569 GPRIN1Q7Z2K8 1008 aa15.55■□□□□ 0.08
SF3B5-201ENST00000367569 IRF2BP1Q8IU81 584 aa15.55■□□□□ 0.08
SF3B5-201ENST00000367569 ZNF687Q8N1G0 1237 aa15.55■□□□□ 0.08
SF3B5-201ENST00000367569 PPM1KQ8N3J5 372 aa15.55■□□□□ 0.08
SF3B5-201ENST00000367569 SUMF1Q8NBK3 374 aa15.55■□□□□ 0.08
SF3B5-201ENST00000367569 ZMIZ2Q8NF64 920 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 841.1 ms