RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 CYP2C8P10632 490 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 C11orf91Q3C1V1 193 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 PAMR1Q6UXH9 720 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 PIWIL4Q7Z3Z4 852 aaKnown RBP3.9□□□□□ -1.79
SYNE1-207ENST00000367255 NME9Q86XW9 330 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 BPIFB6Q8NFQ5 453 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 TMEM174Q8WUU8 243 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 MCRS1Q96EZ8 462 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 NOC4LQ9BVI4 516 aaKnown RBP3.9□□□□□ -1.79
SYNE1-207ENST00000367255 MCUBQ9NWR8 336 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 MCIDASD6RGH6 385 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 LDHAP00338 332 aaKnown RBP3.9□□□□□ -1.79
SYNE1-207ENST00000367255 TXKP42681 527 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 GPD2P43304 727 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 CD151P48509 253 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 DLG1Q12959 904 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 ELOAQ14241 798 aaKnown RBP3.9□□□□□ -1.79
SYNE1-207ENST00000367255 NLRP14Q86W24 1093 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 UNC5BQ8IZJ1 945 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 SVOPLQ8N434 492 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 SETD6Q8TBK2 473 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 RBBP8Q99708 897 aa3.9□□□□□ -1.79
SYNE1-207ENST00000367255 EPB41L4AQ9HCS5 686 aaPredicted RBP3.9□□□□□ -1.79
SYNE1-207ENST00000367255 TCP11X1B4DZS4 312 aa3.89□□□□□ -1.79
SYNE1-207ENST00000367255 FPGTO14772 594 aa3.89□□□□□ -1.79
SYNE1-207ENST00000367255 PNOCQ13519 176 aa3.89□□□□□ -1.79
SYNE1-207ENST00000367255 VPS33AQ96AX1 596 aa3.89□□□□□ -1.79
SYNE1-207ENST00000367255 MLXIPQ9HAP2 919 aa3.89□□□□□ -1.79
SYNE1-207ENST00000367255 THRAP3Q9Y2W1 955 aaKnown RBP3.89□□□□□ -1.79
SYNE1-207ENST00000367255 NFKB1P19838 968 aa3.89□□□□□ -1.79
SYNE1-207ENST00000367255 HADHBP55084 474 aaKnown RBP3.89□□□□□ -1.79
SYNE1-207ENST00000367255 CPNE5Q9HCH3 593 aa3.89□□□□□ -1.79
SYNE1-207ENST00000367255 C1orf112Q9NSG2 853 aa3.89□□□□□ -1.79
SYNE1-207ENST00000367255 UTYO14607 1347 aa3.89□□□□□ -1.79
SYNE1-207ENST00000367255 RIC1Q4ADV7 1423 aa3.89□□□□□ -1.79
SYNE1-207ENST00000367255 LOC110117498-PIK3R3F6TDL0 507 aa3.89□□□□□ -1.79
SYNE1-207ENST00000367255 M0R2C6 588 aa3.89□□□□□ -1.79
SYNE1-207ENST00000367255 BLMHQ13867 455 aa3.89□□□□□ -1.79
SYNE1-207ENST00000367255 HIF1AQ16665 826 aa3.89□□□□□ -1.79
SYNE1-207ENST00000367255 CYB5RLQ6IPT4 315 aa3.89□□□□□ -1.79
SYNE1-207ENST00000367255 DRICH1Q6PGQ1 229 aaPredicted RBP3.89□□□□□ -1.79
SYNE1-207ENST00000367255 PIAS4Q8N2W9 510 aaPredicted RBP3.89□□□□□ -1.79
SYNE1-207ENST00000367255 PIK3R3Q92569 461 aa3.89□□□□□ -1.79
SYNE1-207ENST00000367255 KCNN2Q9H2S1 579 aa3.89□□□□□ -1.79
SYNE1-207ENST00000367255 POLE4Q9NR33 117 aa3.89□□□□□ -1.79
SYNE1-207ENST00000367255 GTF3C4Q9UKN8 822 aa3.89□□□□□ -1.79
SYNE1-207ENST00000367255 SUPT3HO75486 399 aa3.89□□□□□ -1.79
SYNE1-207ENST00000367255 HDLBPQ00341 1268 aaKnown RBP3.89□□□□□ -1.79
SYNE1-207ENST00000367255 GALK2Q01415 458 aa3.89□□□□□ -1.79
SYNE1-207ENST00000367255 GCNT1Q02742 428 aa3.89□□□□□ -1.79
SYNE1-207ENST00000367255 INO80Q9ULG1 1556 aaPredicted RBP3.89□□□□□ -1.79
SYNE1-207ENST00000367255 HPCAL4Q9UM19 191 aa3.89□□□□□ -1.79
SYNE1-207ENST00000367255 TPRKBQ9Y3C4 175 aa3.89□□□□□ -1.79
SYNE1-207ENST00000367255 CEMIPQ8WUJ3 1361 aa3.89□□□□□ -1.79
SYNE1-207ENST00000367255 ENO2P09104 434 aaPredicted RBP3.89□□□□□ -1.79
SYNE1-207ENST00000367255 RXRBP28702 533 aa3.89□□□□□ -1.79
SYNE1-207ENST00000367255 PTP4A2Q12974 167 aa3.89□□□□□ -1.79
SYNE1-207ENST00000367255 UNC5CLQ8IV45 518 aa3.89□□□□□ -1.79
SYNE1-207ENST00000367255 ELMOD1Q8N336 334 aa3.89□□□□□ -1.79
SYNE1-207ENST00000367255 FUT8Q9BYC5 575 aa3.89□□□□□ -1.79
SYNE1-207ENST00000367255 RB1P06400 928 aa3.89□□□□□ -1.79
SYNE1-207ENST00000367255 AKR1B1P15121 316 aa3.89□□□□□ -1.79
SYNE1-207ENST00000367255 C1QBPQ07021 282 aaKnown RBP3.89□□□□□ -1.79
SYNE1-207ENST00000367255 ZDHHC20Q5W0Z9 365 aa3.89□□□□□ -1.79
SYNE1-207ENST00000367255 DAGLBQ8NCG7 672 aa3.89□□□□□ -1.79
SYNE1-207ENST00000367255 GATAD2BQ8WXI9 593 aa3.89□□□□□ -1.79
SYNE1-207ENST00000367255 VMP1Q96GC9 406 aa3.89□□□□□ -1.79
SYNE1-207ENST00000367255 BCS1LQ9Y276 419 aa3.89□□□□□ -1.79
SYNE1-207ENST00000367255 TIMM44O43615 452 aa3.89□□□□□ -1.79
SYNE1-207ENST00000367255 ECE2O60344 883 aa3.89□□□□□ -1.79
SYNE1-207ENST00000367255 SCAF4O95104 1147 aaKnown RBP3.89□□□□□ -1.79
SYNE1-207ENST00000367255 ITGA2P17301 1181 aa3.89□□□□□ -1.79
SYNE1-207ENST00000367255 KCNMA1Q12791 1236 aa3.89□□□□□ -1.79
SYNE1-207ENST00000367255 MAPK7Q13164 816 aa3.89□□□□□ -1.79
SYNE1-207ENST00000367255 HIBCHQ6NVY1 386 aaPredicted RBP3.89□□□□□ -1.79
SYNE1-207ENST00000367255 RADILQ96JH8 1075 aa3.89□□□□□ -1.79
SYNE1-207ENST00000367255 BFARQ9NZS9 450 aa3.89□□□□□ -1.79
SYNE1-207ENST00000367255 ZFR2Q9UPR6 939 aaKnown RBP3.89□□□□□ -1.79
SYNE1-207ENST00000367255 HBS1LQ9Y450 684 aaKnown RBP3.89□□□□□ -1.79
SYNE1-207ENST00000367255 PSMC3P17980 439 aa3.89□□□□□ -1.79
SYNE1-207ENST00000367255 PSPHP78330 225 aa3.89□□□□□ -1.79
SYNE1-207ENST00000367255 ZSCAN29Q8IWY8 852 aaPredicted RBP3.89□□□□□ -1.79
SYNE1-207ENST00000367255 DNAJC5BQ9UF47 199 aa3.89□□□□□ -1.79
SYNE1-207ENST00000367255 TBC1D4O60343 1298 aa3.89□□□□□ -1.79
SYNE1-207ENST00000367255 RECQL5O94762 991 aaPredicted RBP3.89□□□□□ -1.79
SYNE1-207ENST00000367255 FOXM1Q08050 763 aa3.89□□□□□ -1.79
SYNE1-207ENST00000367255 SLC5A9Q2M3M2 681 aa3.89□□□□□ -1.79
SYNE1-207ENST00000367255 LBHQ53QV2 105 aaPredicted RBP3.89□□□□□ -1.79
SYNE1-207ENST00000367255 LRRC6Q86X45 466 aa3.89□□□□□ -1.79
SYNE1-207ENST00000367255 SAMD14Q8IZD0 417 aaPredicted RBP3.89□□□□□ -1.79
SYNE1-207ENST00000367255 PARP8Q8N3A8 854 aa3.89□□□□□ -1.79
SYNE1-207ENST00000367255 MPP5Q8N3R9 675 aa3.89□□□□□ -1.79
SYNE1-207ENST00000367255 EFCAB1Q9HAE3 211 aa3.89□□□□□ -1.79
SYNE1-207ENST00000367255 TBC1D14Q9P2M4 693 aa3.89□□□□□ -1.79
SYNE1-207ENST00000367255 SERTAD1Q9UHV2 236 aa3.89□□□□□ -1.79
SYNE1-207ENST00000367255 PET100P0DJ07 73 aa3.89□□□□□ -1.79
SYNE1-207ENST00000367255 EZH2Q15910 746 aaKnown RBP3.89□□□□□ -1.79
SYNE1-207ENST00000367255 NFIL3Q16649 462 aa3.89□□□□□ -1.79
SYNE1-207ENST00000367255 PLA2G4FQ68DD2 849 aa3.89□□□□□ -1.79
SYNE1-207ENST00000367255 ADAM32Q8TC27 787 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms