RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 CTC1Q2NKJ3 1217 aa9.52□□□□□ -0.89
TOP1-201ENST00000361337 XKR3Q5GH77 459 aa9.52□□□□□ -0.89
TOP1-201ENST00000361337 FOXB2Q5VYV0 432 aa9.52□□□□□ -0.89
TOP1-201ENST00000361337 RGMBQ6NW40 437 aa9.52□□□□□ -0.89
TOP1-201ENST00000361337 XXYLT1Q8NBI6 393 aa9.52□□□□□ -0.89
TOP1-201ENST00000361337 CADM1Q9BY67 442 aaKnown RBP9.52□□□□□ -0.89
TOP1-201ENST00000361337 UVRAGQ9P2Y5 699 aa9.52□□□□□ -0.89
TOP1-201ENST00000361337 SEL1LQ9UBV2 794 aa9.52□□□□□ -0.89
TOP1-201ENST00000361337 CFAP69A5D8W1 941 aa9.52□□□□□ -0.89
TOP1-201ENST00000361337 ASB14A6NK59 587 aa9.52□□□□□ -0.89
TOP1-201ENST00000361337 SMAPO00193 183 aa9.52□□□□□ -0.89
TOP1-201ENST00000361337 MAPK13O15264 365 aa9.52□□□□□ -0.89
TOP1-201ENST00000361337 ADRA1DP25100 572 aa9.52□□□□□ -0.89
TOP1-201ENST00000361337 KLRC2P26717 231 aa9.52□□□□□ -0.89
TOP1-201ENST00000361337 SFNP31947 248 aa9.52□□□□□ -0.89
TOP1-201ENST00000361337 DYNC1I2Q13409 638 aaKnown RBP9.52□□□□□ -0.89
TOP1-201ENST00000361337 NLRP9Q7RTR0 991 aa9.52□□□□□ -0.89
TOP1-201ENST00000361337 SDCCAG8Q86SQ7 713 aaPredicted RBP9.52□□□□□ -0.89
TOP1-201ENST00000361337 ANKMY2Q8IV38 441 aa9.52□□□□□ -0.89
TOP1-201ENST00000361337 AGGF1Q8N302 714 aaeCLIP9.52□□□□□ -0.891e-10■■■□□ 19.1
TOP1-201ENST00000361337 CCDC124Q96CT7 223 aaKnown RBP9.52□□□□□ -0.89
TOP1-201ENST00000361337 ZIC5Q96T25 663 aa9.52□□□□□ -0.89
TOP1-201ENST00000361337 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.52□□□□□ -0.89
TOP1-201ENST00000361337 M0QZ92 97 aa9.52□□□□□ -0.89
TOP1-201ENST00000361337 MAGEB2O15479 319 aa9.52□□□□□ -0.89
TOP1-201ENST00000361337 FAM200BP0CF97 657 aa9.52□□□□□ -0.89
TOP1-201ENST00000361337 PIK3CAP42336 1068 aa9.52□□□□□ -0.89
TOP1-201ENST00000361337 ORC1Q13415 861 aa9.52□□□□□ -0.89
TOP1-201ENST00000361337 CLEC16AQ2KHT3 1053 aa9.52□□□□□ -0.89
TOP1-201ENST00000361337 SCARA3Q6AZY7 606 aa9.52□□□□□ -0.89
TOP1-201ENST00000361337 TWF2Q6IBS0 349 aaKnown RBP9.52□□□□□ -0.89
TOP1-201ENST00000361337 ZBTB46Q86UZ6 589 aa9.52□□□□□ -0.89
TOP1-201ENST00000361337 ZC3H15Q8WU90 426 aaKnown RBP9.52□□□□□ -0.89
TOP1-201ENST00000361337 PTPRN2Q92932 1015 aa9.52□□□□□ -0.89
TOP1-201ENST00000361337 FBXO6Q9NRD1 293 aaPredicted RBP9.52□□□□□ -0.89
TOP1-201ENST00000361337 GALNT8Q9NY28 637 aa9.52□□□□□ -0.89
TOP1-201ENST00000361337 KLK14Q9P0G3 267 aa9.52□□□□□ -0.89
TOP1-201ENST00000361337 DNPEPQ9ULA0 475 aa9.52□□□□□ -0.89
TOP1-201ENST00000361337 TSC22D4Q9Y3Q8 395 aa9.52□□□□□ -0.89
TOP1-201ENST00000361337 ZNFX1Q9P2E3 1918 aaKnown RBP9.51□□□□□ -0.89
TOP1-201ENST00000361337 UMODL1Q5DID0 1318 aa9.51□□□□□ -0.89
TOP1-201ENST00000361337 SYNJ2BP-COX16A0A087WUM0 186 aa9.51□□□□□ -0.89
TOP1-201ENST00000361337 TTC36A6NLP5 189 aa9.51□□□□□ -0.89
TOP1-201ENST00000361337 SIGLEC16A6NMB1 481 aa9.51□□□□□ -0.89
TOP1-201ENST00000361337 PLS3P13797 630 aa9.51□□□□□ -0.89
TOP1-201ENST00000361337 STAT4Q14765 748 aa9.51□□□□□ -0.89
TOP1-201ENST00000361337 SNRNP35Q16560 246 aaKnown RBP9.51□□□□□ -0.89
TOP1-201ENST00000361337 CCL14Q16627 93 aa9.51□□□□□ -0.89
TOP1-201ENST00000361337 PDK4Q16654 411 aa9.51□□□□□ -0.89
TOP1-201ENST00000361337 LVRNQ6Q4G3 990 aa9.51□□□□□ -0.89
TOP1-201ENST00000361337 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.51□□□□□ -0.89
TOP1-201ENST00000361337 MCOLN2Q8IZK6 566 aa9.51□□□□□ -0.89
TOP1-201ENST00000361337 PAF1Q8N7H5 531 aa9.51□□□□□ -0.89
TOP1-201ENST00000361337 ENDOVQ8N8Q3 282 aaKnown RBP9.51□□□□□ -0.89
TOP1-201ENST00000361337 CXorf38Q8TB03 319 aa9.51□□□□□ -0.89
TOP1-201ENST00000361337 FAM81AQ8TBF8 368 aa9.51□□□□□ -0.89
TOP1-201ENST00000361337 WDR60Q8WVS4 1066 aa9.51□□□□□ -0.89
TOP1-201ENST00000361337 FAM136AQ96C01 138 aa9.51□□□□□ -0.89
TOP1-201ENST00000361337 GRAMD1AQ96CP6 724 aa9.51□□□□□ -0.89
TOP1-201ENST00000361337 ADPGKQ9BRR6 497 aa9.51□□□□□ -0.89
TOP1-201ENST00000361337 SMYD3Q9H7B4 428 aa9.51□□□□□ -0.89
TOP1-201ENST00000361337 VPS37BQ9H9H4 285 aa9.51□□□□□ -0.89
TOP1-201ENST00000361337 XAB2Q9HCS7 855 aaKnown RBP9.51□□□□□ -0.89
TOP1-201ENST00000361337 CYLDQ9NQC7 956 aa9.51□□□□□ -0.89
TOP1-201ENST00000361337 CYP26B1Q9NR63 512 aa9.51□□□□□ -0.89
TOP1-201ENST00000361337 ARL8BQ9NVJ2 186 aa9.51□□□□□ -0.89
TOP1-201ENST00000361337 UBAP1Q9NZ09 502 aa9.51□□□□□ -0.89
TOP1-201ENST00000361337 COX16Q9P0S2 106 aa9.51□□□□□ -0.89
TOP1-201ENST00000361337 PCDH10Q9P2E7 1040 aa9.51□□□□□ -0.89
TOP1-201ENST00000361337 ZFP69BQ9UJL9 534 aa9.51□□□□□ -0.89
TOP1-201ENST00000361337 PHIPQ8WWQ0 1821 aa9.51□□□□□ -0.89
TOP1-201ENST00000361337 A0A0G2JMZ2 1700 aa9.51□□□□□ -0.89
TOP1-201ENST00000361337 LRRC37A2A6NM11 1700 aa9.51□□□□□ -0.89
TOP1-201ENST00000361337 UBE4BO95155 1302 aa9.51□□□□□ -0.89
TOP1-201ENST00000361337 NVLO15381 856 aaKnown RBP9.51□□□□□ -0.89
TOP1-201ENST00000361337 HNRNPRO43390 633 aaKnown RBP9.51□□□□□ -0.89
TOP1-201ENST00000361337 PYGBP11216 843 aa9.51□□□□□ -0.89
TOP1-201ENST00000361337 UNGP13051 313 aaPredicted RBP9.51□□□□□ -0.89
TOP1-201ENST00000361337 KRT4P19013 534 aa9.51□□□□□ -0.89
TOP1-201ENST00000361337 SP100P23497 879 aaPredicted RBP9.51□□□□□ -0.89
TOP1-201ENST00000361337 NPTX2P47972 431 aa9.51□□□□□ -0.89
TOP1-201ENST00000361337 MFAP3P55082 362 aa9.51□□□□□ -0.89
TOP1-201ENST00000361337 SPARCL1Q14515 664 aa9.51□□□□□ -0.89
TOP1-201ENST00000361337 KPNB1Q14974 876 aaKnown RBP9.51□□□□□ -0.89
TOP1-201ENST00000361337 SLC44A4Q53GD3 710 aa9.51□□□□□ -0.89
TOP1-201ENST00000361337 ACSBG2Q5FVE4 666 aa9.51□□□□□ -0.89
TOP1-201ENST00000361337 FYB2Q5VWT5 728 aa9.51□□□□□ -0.89
TOP1-201ENST00000361337 CXCL17Q6UXB2 119 aa9.51□□□□□ -0.89
TOP1-201ENST00000361337 CLNKQ7Z7G1 428 aa9.51□□□□□ -0.89
TOP1-201ENST00000361337 TTC7BQ86TV6 843 aa9.51□□□□□ -0.89
TOP1-201ENST00000361337 MCPH1Q8NEM0 835 aa9.51□□□□□ -0.89
TOP1-201ENST00000361337 ZNF75CPQ92670 426 aaPredicted RBP9.51□□□□□ -0.89
TOP1-201ENST00000361337 PHACTR1Q9C0D0 580 aa9.51□□□□□ -0.89
TOP1-201ENST00000361337 MYPNQ86TC9 1320 aa9.51□□□□□ -0.89
TOP1-201ENST00000361337 TYROBPO43914 113 aa9.51□□□□□ -0.89
TOP1-201ENST00000361337 INSRRP14616 1297 aa9.51□□□□□ -0.89
TOP1-201ENST00000361337 RCN1Q15293 331 aa9.51□□□□□ -0.89
TOP1-201ENST00000361337 PPP1R15BQ5SWA1 713 aa9.51□□□□□ -0.89
TOP1-201ENST00000361337 C4orf50Q6ZRC1 276 aa9.51□□□□□ -0.89
TOP1-201ENST00000361337 NANOGNBQ7Z5D8 188 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms