RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 CYP51A1Q16850 503 aa13.89□□□□□ -0.19
CCDC144A-203ENST00000360495 EPC2Q52LR7 807 aa13.89□□□□□ -0.19
CCDC144A-203ENST00000360495 SPANXN2Q5MJ10 180 aa13.89□□□□□ -0.19
CCDC144A-203ENST00000360495 ISLR2Q6UXK2 745 aa13.89□□□□□ -0.19
CCDC144A-203ENST00000360495 RORBQ92753 470 aa13.89□□□□□ -0.19
CCDC144A-203ENST00000360495 GORASP1Q9BQQ3 440 aa13.89□□□□□ -0.19
CCDC144A-203ENST00000360495 C1orf50Q9BV19 199 aa13.89□□□□□ -0.19
CCDC144A-203ENST00000360495 F8W810 466 aa13.88□□□□□ -0.19
CCDC144A-203ENST00000360495 CCDC130P13994 396 aa13.88□□□□□ -0.19
CCDC144A-203ENST00000360495 POU1F1P28069 291 aa13.88□□□□□ -0.19
CCDC144A-203ENST00000360495 ACCSLQ4AC99 568 aa13.88□□□□□ -0.19
CCDC144A-203ENST00000360495 AGAP9Q5VTM2 703 aa13.88□□□□□ -0.19
CCDC144A-203ENST00000360495 ATP8B4Q8TF62 1192 aa13.88□□□□□ -0.19
CCDC144A-203ENST00000360495 SLC30A1Q9Y6M5 507 aa13.88□□□□□ -0.19
CCDC144A-203ENST00000360495 RIPK2O43353 540 aa13.88□□□□□ -0.19
CCDC144A-203ENST00000360495 PDE9AO76083 593 aa13.88□□□□□ -0.19
CCDC144A-203ENST00000360495 SERPIND1P05546 499 aa13.88□□□□□ -0.19
CCDC144A-203ENST00000360495 KRT20P35900 424 aa13.88□□□□□ -0.19
CCDC144A-203ENST00000360495 TRAF3Q13114 568 aa13.88□□□□□ -0.19
CCDC144A-203ENST00000360495 YTHDF3Q7Z739 585 aaKnown RBP13.88□□□□□ -0.19
CCDC144A-203ENST00000360495 ZNF677Q86XU0 584 aa13.88□□□□□ -0.19
CCDC144A-203ENST00000360495 MIER2Q8N344 545 aa13.88□□□□□ -0.19
CCDC144A-203ENST00000360495 TDRD5Q8NAT2 981 aaKnown RBP13.88□□□□□ -0.19
CCDC144A-203ENST00000360495 NSUN6Q8TEA1 469 aaKnown RBP13.88□□□□□ -0.19
CCDC144A-203ENST00000360495 SERHL2Q9H4I8 314 aa13.88□□□□□ -0.19
CCDC144A-203ENST00000360495 SERHLQ9NQF3 203 aa13.88□□□□□ -0.19
CCDC144A-203ENST00000360495 CHKBQ9Y259 395 aa13.88□□□□□ -0.19
CCDC144A-203ENST00000360495 CENPXA8MT69 81 aa13.88□□□□□ -0.19
CCDC144A-203ENST00000360495 SLCO1B7G3V0H7 640 aa13.88□□□□□ -0.19
CCDC144A-203ENST00000360495 SOAT2O75908 522 aa13.88□□□□□ -0.19
CCDC144A-203ENST00000360495 TGM2P21980 687 aa13.88□□□□□ -0.19
CCDC144A-203ENST00000360495 RGS4P49798 205 aa13.88□□□□□ -0.19
CCDC144A-203ENST00000360495 NCKAP1LP55160 1127 aa13.88□□□□□ -0.19
CCDC144A-203ENST00000360495 SYTL3Q4VX76 610 aa13.88□□□□□ -0.19
CCDC144A-203ENST00000360495 TMEM63BQ5T3F8 832 aa13.88□□□□□ -0.19
CCDC144A-203ENST00000360495 NAPEPLDQ6IQ20 393 aa13.88□□□□□ -0.19
CCDC144A-203ENST00000360495 KBTBD2Q8IY47 623 aa13.88□□□□□ -0.19
CCDC144A-203ENST00000360495 ATG16L2Q8NAA4 619 aa13.88□□□□□ -0.19
CCDC144A-203ENST00000360495 NARS2Q96I59 477 aaKnown RBP13.88□□□□□ -0.19
CCDC144A-203ENST00000360495 FEM1BQ9UK73 627 aa13.88□□□□□ -0.19
CCDC144A-203ENST00000360495 RUVBL2Q9Y230 463 aaKnown RBP13.88□□□□□ -0.19
CCDC144A-203ENST00000360495 RPS6KL1Q9Y6S9 549 aa13.88□□□□□ -0.19
CCDC144A-203ENST00000360495 COMMD3-BMI1R4GMX3 469 aa13.88□□□□□ -0.19
CCDC144A-203ENST00000360495 FDPSP14324 419 aaKnown RBP13.88□□□□□ -0.19
CCDC144A-203ENST00000360495 GPD1P21695 349 aa13.88□□□□□ -0.19
CCDC144A-203ENST00000360495 PRIM2P49643 509 aa13.88□□□□□ -0.19
CCDC144A-203ENST00000360495 RPL10AP62906 217 aaKnown RBP13.88□□□□□ -0.19
CCDC144A-203ENST00000360495 KLHL12Q53G59 568 aa13.88□□□□□ -0.19
CCDC144A-203ENST00000360495 CACHD1Q5VU97 1274 aa13.88□□□□□ -0.19
CCDC144A-203ENST00000360495 SLC26A11Q86WA9 606 aa13.88□□□□□ -0.19
CCDC144A-203ENST00000360495 AENQ8WTP8 325 aaKnown RBP13.88□□□□□ -0.19
CCDC144A-203ENST00000360495 PABPC5Q96DU9 382 aaKnown RBP13.88□□□□□ -0.19
CCDC144A-203ENST00000360495 RNFT2Q96EX2 444 aa13.88□□□□□ -0.19
CCDC144A-203ENST00000360495 ZNF333Q96JL9 665 aa13.88□□□□□ -0.19
CCDC144A-203ENST00000360495 CNPY3Q9BT09 278 aa13.88□□□□□ -0.19
CCDC144A-203ENST00000360495 APOL5Q9BWW9 433 aa13.88□□□□□ -0.19
CCDC144A-203ENST00000360495 SNAP23O00161 211 aa13.87□□□□□ -0.19
CCDC144A-203ENST00000360495 CACNB2Q08289 660 aaPredicted RBP13.87□□□□□ -0.19
CCDC144A-203ENST00000360495 C1DQ13901 141 aaKnown RBP13.87□□□□□ -0.19
CCDC144A-203ENST00000360495 NFIL3Q16649 462 aa13.87□□□□□ -0.19
CCDC144A-203ENST00000360495 KCNT1Q5JUK3 1230 aa13.87□□□□□ -0.19
CCDC144A-203ENST00000360495 OTUD3Q5T2D3 398 aaPredicted RBP13.87□□□□□ -0.19
CCDC144A-203ENST00000360495 C11orf63Q6NUN7 778 aa13.87□□□□□ -0.19
CCDC144A-203ENST00000360495 CRELD2Q6UXH1 353 aaPredicted RBP13.87□□□□□ -0.19
CCDC144A-203ENST00000360495 ZNF560Q96MR9 790 aa13.87□□□□□ -0.19
CCDC144A-203ENST00000360495 KCTD14Q9BQ13 255 aaPredicted RBP13.87□□□□□ -0.19
CCDC144A-203ENST00000360495 TIPINQ9BVW5 301 aa13.87□□□□□ -0.19
CCDC144A-203ENST00000360495 KCTD10Q9H3F6 313 aa13.87□□□□□ -0.19
CCDC144A-203ENST00000360495 PALLDQ8WX93 1383 aa13.87□□□□□ -0.19
CCDC144A-203ENST00000360495 FAM196BA6NMK8 535 aa13.87□□□□□ -0.19
CCDC144A-203ENST00000360495 RRM2P31350 389 aa13.87□□□□□ -0.19
CCDC144A-203ENST00000360495 CHN2P52757 468 aa13.87□□□□□ -0.19
CCDC144A-203ENST00000360495 ITGB3BPQ13352 177 aaPredicted RBP13.87□□□□□ -0.19
CCDC144A-203ENST00000360495 ATP6AP1LQ52LC2 224 aa13.87□□□□□ -0.19
CCDC144A-203ENST00000360495 ZC2HC1CQ53FD0 456 aaPredicted RBP13.87□□□□□ -0.19
CCDC144A-203ENST00000360495 DGKKQ5KSL6 1271 aa13.87□□□□□ -0.19
CCDC144A-203ENST00000360495 KHDRBS2Q5VWX1 349 aaKnown RBP13.87□□□□□ -0.19
CCDC144A-203ENST00000360495 ZNF57Q68EA5 555 aaPredicted RBP13.87□□□□□ -0.19
CCDC144A-203ENST00000360495 ACAD10Q6JQN1 1059 aa13.87□□□□□ -0.19
CCDC144A-203ENST00000360495 ZFP1Q6P2D0 407 aa13.87□□□□□ -0.19
CCDC144A-203ENST00000360495 CCDC126Q96EE4 140 aa13.87□□□□□ -0.19
CCDC144A-203ENST00000360495 PPP1R2P1Q96PQ5 205 aa13.87□□□□□ -0.19
CCDC144A-203ENST00000360495 MMADHCQ9H3L0 296 aaPredicted RBP13.87□□□□□ -0.19
CCDC144A-203ENST00000360495 CD209Q9NNX6 404 aa13.87□□□□□ -0.19
CCDC144A-203ENST00000360495 RAD51Q06609 339 aa13.87□□□□□ -0.19
CCDC144A-203ENST00000360495 IGDCC4Q8TDY8 1250 aa13.87□□□□□ -0.19
CCDC144A-203ENST00000360495 APOL4Q9BPW4 351 aa13.87□□□□□ -0.19
CCDC144A-203ENST00000360495 FUCA2Q9BTY2 467 aa13.87□□□□□ -0.19
CCDC144A-203ENST00000360495 MRPL39Q9NYK5 338 aaKnown RBP13.87□□□□□ -0.19
CCDC144A-203ENST00000360495 RRN3Q9NYV6 651 aa13.87□□□□□ -0.19
CCDC144A-203ENST00000360495 TJP2Q9UDY2 1190 aa13.87□□□□□ -0.19
CCDC144A-203ENST00000360495 ZNF682O95780 498 aa13.87□□□□□ -0.19
CCDC144A-203ENST00000360495 FAM153BP0C7A2 387 aa13.87□□□□□ -0.19
CCDC144A-203ENST00000360495 CD44P16070 742 aaKnown RBP13.87□□□□□ -0.19
CCDC144A-203ENST00000360495 NNMTP40261 264 aa13.87□□□□□ -0.19
CCDC144A-203ENST00000360495 NPEPPSP55786 919 aa13.87□□□□□ -0.19
CCDC144A-203ENST00000360495 FAM153CQ494X1 144 aa13.87□□□□□ -0.19
CCDC144A-203ENST00000360495 GALNTL6Q49A17 601 aa13.87□□□□□ -0.19
CCDC144A-203ENST00000360495 AGKQ53H12 422 aa13.87□□□□□ -0.19
CCDC144A-203ENST00000360495 SUSD4Q5VX71 490 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms