RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 PDCL3Q9H2J4 239 aa20.28■□□□□ 0.84
HLA-DRB1-201ENST00000360004 ZNF334Q9HCZ1 680 aaPredicted RBP20.28■□□□□ 0.84
HLA-DRB1-201ENST00000360004 NLRC4Q9NPP4 1024 aa20.28■□□□□ 0.84
HLA-DRB1-201ENST00000360004 AVENQ9NQS1 362 aaPredicted RBP20.28■□□□□ 0.84
HLA-DRB1-201ENST00000360004 CDH7Q9ULB5 785 aa20.28■□□□□ 0.84
HLA-DRB1-201ENST00000360004 PRUNE2Q8WUY3 3088 aa20.28■□□□□ 0.84
HLA-DRB1-201ENST00000360004 A0A1B0GTH6 734 aa20.27■□□□□ 0.84
HLA-DRB1-201ENST00000360004 C2CD4DB7Z1M9 353 aa20.27■□□□□ 0.84
HLA-DRB1-201ENST00000360004 RNF225M0QZC1 329 aaPredicted RBP20.27■□□□□ 0.84
HLA-DRB1-201ENST00000360004 TEX33O43247 280 aa20.27■□□□□ 0.84
HLA-DRB1-201ENST00000360004 CBFA2T2O43439 604 aa20.27■□□□□ 0.84
HLA-DRB1-201ENST00000360004 NOL4O94818 638 aa20.27■□□□□ 0.84
HLA-DRB1-201ENST00000360004 ABL1P00519 1130 aa20.27■□□□□ 0.84
HLA-DRB1-201ENST00000360004 CEBPBP17676 345 aa20.27■□□□□ 0.84
HLA-DRB1-201ENST00000360004 BPIFB4P59827 614 aa20.27■□□□□ 0.84
HLA-DRB1-201ENST00000360004 SLC5A9Q2M3M2 681 aa20.27■□□□□ 0.84
HLA-DRB1-201ENST00000360004 CLEC20AQ6ZU45 233 aa20.27■□□□□ 0.84
HLA-DRB1-201ENST00000360004 ANKRD52Q8NB46 1076 aa20.27■□□□□ 0.84
HLA-DRB1-201ENST00000360004 FGF13Q92913 245 aa20.27■□□□□ 0.84
HLA-DRB1-201ENST00000360004 TCEAL4Q96EI5 215 aa20.27■□□□□ 0.84
HLA-DRB1-201ENST00000360004 MCRS1Q96EZ8 462 aa20.27■□□□□ 0.84
HLA-DRB1-201ENST00000360004 SLITRK1Q96PX8 696 aa20.27■□□□□ 0.84
HLA-DRB1-201ENST00000360004 STK33Q9BYT3 514 aa20.27■□□□□ 0.84
HLA-DRB1-201ENST00000360004 IFNKQ9P0W0 207 aa20.27■□□□□ 0.84
HLA-DRB1-201ENST00000360004 AJAP1Q9UKB5 411 aaPredicted RBP20.27■□□□□ 0.84
HLA-DRB1-201ENST00000360004 SIK3Q9Y2K2 1263 aa20.27■□□□□ 0.84
HLA-DRB1-201ENST00000360004 ZFP37Q9Y6Q3 630 aaPredicted RBP20.27■□□□□ 0.84
HLA-DRB1-201ENST00000360004 C2orf16Q68DN1 1984 aa20.26■□□□□ 0.83
HLA-DRB1-201ENST00000360004 FOXN3O00409 490 aaPredicted RBP20.26■□□□□ 0.83
HLA-DRB1-201ENST00000360004 CYP26A1O43174 497 aa20.26■□□□□ 0.83
HLA-DRB1-201ENST00000360004 YWHAQP27348 245 aa20.26■□□□□ 0.83
HLA-DRB1-201ENST00000360004 SLC5A3P53794 718 aa20.26■□□□□ 0.83
HLA-DRB1-201ENST00000360004 EPHA5P54756 1037 aa20.26■□□□□ 0.83
HLA-DRB1-201ENST00000360004 BST2Q10589 180 aaKnown RBP20.26■□□□□ 0.83
HLA-DRB1-201ENST00000360004 TEAD2Q15562 447 aa20.26■□□□□ 0.83
HLA-DRB1-201ENST00000360004 TMC8Q8IU68 726 aa20.26■□□□□ 0.83
HLA-DRB1-201ENST00000360004 UBA3Q8TBC4 463 aa20.26■□□□□ 0.83
HLA-DRB1-201ENST00000360004 FBXO32Q969P5 355 aa20.26■□□□□ 0.83
HLA-DRB1-201ENST00000360004 TRMT2BQ96GJ1 504 aaKnown RBP20.26■□□□□ 0.83
HLA-DRB1-201ENST00000360004 NAP1L5Q96NT1 182 aaPredicted RBP20.26■□□□□ 0.83
HLA-DRB1-201ENST00000360004 NECAB3Q96P71 396 aaPredicted RBP20.26■□□□□ 0.83
HLA-DRB1-201ENST00000360004 MYADMQ96S97 322 aa20.26■□□□□ 0.83
HLA-DRB1-201ENST00000360004 GANQ9H2C0 597 aa20.26■□□□□ 0.83
HLA-DRB1-201ENST00000360004 TRPM5Q9NZQ8 1165 aa20.26■□□□□ 0.83
HLA-DRB1-201ENST00000360004 CNTN6Q9UQ52 1028 aa20.26■□□□□ 0.83
HLA-DRB1-201ENST00000360004 O00370 1275 aa20.25■□□□□ 0.83
HLA-DRB1-201ENST00000360004 CALCAP01258 141 aa20.25■□□□□ 0.83
HLA-DRB1-201ENST00000360004 PNMA6AP0CW24 399 aaPredicted RBP20.25■□□□□ 0.83
HLA-DRB1-201ENST00000360004 SETSIPP0DME0 302 aa20.25■□□□□ 0.83
HLA-DRB1-201ENST00000360004 HMGA1P17096 107 aaKnown RBP20.25■□□□□ 0.83
HLA-DRB1-201ENST00000360004 ZNF132P52740 706 aa20.25■□□□□ 0.83
HLA-DRB1-201ENST00000360004 CYP4F8P98187 520 aa20.25■□□□□ 0.83
HLA-DRB1-201ENST00000360004 CNGA2Q16280 664 aa20.25■□□□□ 0.83
HLA-DRB1-201ENST00000360004 PRSS36Q5K4E3 855 aa20.25■□□□□ 0.83
HLA-DRB1-201ENST00000360004 GPR158Q5T848 1215 aa20.25■□□□□ 0.83
HLA-DRB1-201ENST00000360004 NPAS3Q8IXF0 933 aa20.25■□□□□ 0.83
HLA-DRB1-201ENST00000360004 GJD3Q8N144 294 aa20.25■□□□□ 0.83
HLA-DRB1-201ENST00000360004 SHKBP1Q8TBC3 707 aa20.25■□□□□ 0.83
HLA-DRB1-201ENST00000360004 TFAP2BQ92481 460 aa20.25■□□□□ 0.83
HLA-DRB1-201ENST00000360004 GPR88Q9GZN0 384 aa20.25■□□□□ 0.83
HLA-DRB1-201ENST00000360004 FBXO44Q9H4M3 255 aa20.25■□□□□ 0.83
HLA-DRB1-201ENST00000360004 CSNK1G1Q9HCP0 422 aa20.25■□□□□ 0.83
HLA-DRB1-201ENST00000360004 TRPC7Q9HCX4 862 aa20.25■□□□□ 0.83
HLA-DRB1-201ENST00000360004 TMEM30AQ9NV96 361 aa20.25■□□□□ 0.83
HLA-DRB1-201ENST00000360004 GDE1Q9NZC3 331 aa20.25■□□□□ 0.83
HLA-DRB1-201ENST00000360004 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.25■□□□□ 0.83
HLA-DRB1-201ENST00000360004 BEST1O76090 585 aa20.24■□□□□ 0.83
HLA-DRB1-201ENST00000360004 MICAL2O94851 1124 aa20.24■□□□□ 0.83
HLA-DRB1-201ENST00000360004 KRT9P35527 623 aa20.24■□□□□ 0.83
HLA-DRB1-201ENST00000360004 CCR2P41597 374 aa20.24■□□□□ 0.83
HLA-DRB1-201ENST00000360004 STAT1P42224 750 aa20.24■□□□□ 0.83
HLA-DRB1-201ENST00000360004 PDE6CP51160 858 aa20.24■□□□□ 0.83
HLA-DRB1-201ENST00000360004 PTPN21Q16825 1174 aa20.24■□□□□ 0.83
HLA-DRB1-201ENST00000360004 SMYD5Q6GMV2 418 aa20.24■□□□□ 0.83
HLA-DRB1-201ENST00000360004 LCLAT1Q6UWP7 414 aa20.24■□□□□ 0.83
HLA-DRB1-201ENST00000360004 PDZD8Q8NEN9 1154 aa20.24■□□□□ 0.83
HLA-DRB1-201ENST00000360004 ZMIZ2Q8NF64 920 aa20.24■□□□□ 0.83
HLA-DRB1-201ENST00000360004 LRRC3Q9BY71 257 aa20.24■□□□□ 0.83
HLA-DRB1-201ENST00000360004 LRRC4Q9HBW1 653 aa20.24■□□□□ 0.83
HLA-DRB1-201ENST00000360004 COMMD8Q9NX08 183 aa20.24■□□□□ 0.83
HLA-DRB1-201ENST00000360004 LIMD1Q9UGP4 676 aa20.24■□□□□ 0.83
HLA-DRB1-201ENST00000360004 CEP83Q9Y592 693 aa20.24■□□□□ 0.83
HLA-DRB1-201ENST00000360004 TCF20Q9UGU0 1960 aaKnown RBP20.24■□□□□ 0.83
HLA-DRB1-201ENST00000360004 A0A1W2PQC6 194 aa20.23■□□□□ 0.83
HLA-DRB1-201ENST00000360004 LOC730098B7Z3J9 87 aa20.23■□□□□ 0.83
HLA-DRB1-201ENST00000360004 F8VZ95 297 aa20.23■□□□□ 0.83
HLA-DRB1-201ENST00000360004 GFPT2O94808 682 aa20.23■□□□□ 0.83
HLA-DRB1-201ENST00000360004 LAMP2P13473 410 aa20.23■□□□□ 0.83
HLA-DRB1-201ENST00000360004 USP46P62068 366 aa20.23■□□□□ 0.83
HLA-DRB1-201ENST00000360004 PDE4CQ08493 712 aa20.23■□□□□ 0.83
HLA-DRB1-201ENST00000360004 TAF10Q12962 218 aa20.23■□□□□ 0.83
HLA-DRB1-201ENST00000360004 NR1I3Q14994 352 aa20.23■□□□□ 0.83
HLA-DRB1-201ENST00000360004 GAREM2Q75VX8 874 aa20.23■□□□□ 0.83
HLA-DRB1-201ENST00000360004 MTSS1LQ765P7 747 aa20.23■□□□□ 0.83
HLA-DRB1-201ENST00000360004 TTC30AQ86WT1 665 aa20.23■□□□□ 0.83
HLA-DRB1-201ENST00000360004 FAM71AQ8IYT1 594 aa20.23■□□□□ 0.83
HLA-DRB1-201ENST00000360004 ZDHHC14Q8IZN3 488 aa20.23■□□□□ 0.83
HLA-DRB1-201ENST00000360004 SIX6OS1Q8N1H7 587 aa20.23■□□□□ 0.83
HLA-DRB1-201ENST00000360004 SCAMP5Q8TAC9 235 aa20.23■□□□□ 0.83
HLA-DRB1-201ENST00000360004 MYRFLQ96LU7 910 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms