RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 CPSF4O95639 269 aaKnown RBP19.05■□□□□ 0.64
SHANK1-202ENST00000359082 RAP1GAPP47736 663 aa19.05■□□□□ 0.64
SHANK1-202ENST00000359082 TC2NQ8N9U0 490 aa19.05■□□□□ 0.64
SHANK1-202ENST00000359082 TUBGCP3Q96CW5 907 aa19.05■□□□□ 0.64
SHANK1-202ENST00000359082 LINC00854A0A1B0GVQ3 168 aa19.05■□□□□ 0.64
SHANK1-202ENST00000359082 SUPT7LO94864 414 aa19.05■□□□□ 0.64
SHANK1-202ENST00000359082 RGS2P41220 211 aa19.05■□□□□ 0.64
SHANK1-202ENST00000359082 AGAP9Q5VTM2 703 aa19.05■□□□□ 0.64
SHANK1-202ENST00000359082 UNC45BQ8IWX7 931 aa19.05■□□□□ 0.64
SHANK1-202ENST00000359082 ZNF614Q8N883 585 aa19.05■□□□□ 0.64
SHANK1-202ENST00000359082 PRMT7Q9NVM4 692 aaPredicted RBP19.05■□□□□ 0.64
SHANK1-202ENST00000359082 VN1R5Q7Z5H4 357 aa19.04■□□□□ 0.64
SHANK1-202ENST00000359082 SLITRK1Q96PX8 696 aa19.04■□□□□ 0.64
SHANK1-202ENST00000359082 TSEN34Q9BSV6 310 aaKnown RBP19.04■□□□□ 0.64
SHANK1-202ENST00000359082 NDEL1Q9GZM8 345 aa19.04■□□□□ 0.64
SHANK1-202ENST00000359082 NYAP2Q9P242 653 aa19.04■□□□□ 0.64
SHANK1-202ENST00000359082 RGS5O15539 181 aa19.04■□□□□ 0.64
SHANK1-202ENST00000359082 ASS1P00966 412 aaKnown RBP19.04■□□□□ 0.64
SHANK1-202ENST00000359082 GYPCP04921 128 aa19.04■□□□□ 0.64
SHANK1-202ENST00000359082 GEMP55040 296 aa19.04■□□□□ 0.64
SHANK1-202ENST00000359082 C4orf22Q6V702 233 aa19.04■□□□□ 0.64
SHANK1-202ENST00000359082 EPS8L3Q8TE67 593 aaKnown RBP19.04■□□□□ 0.64
SHANK1-202ENST00000359082 KRT84Q9NSB2 600 aa19.04■□□□□ 0.64
SHANK1-202ENST00000359082 PHTF1Q9UMS5 762 aa19.04■□□□□ 0.64
SHANK1-202ENST00000359082 PRG3Q9Y2Y8 225 aaPredicted RBP19.04■□□□□ 0.64
SHANK1-202ENST00000359082 CRB1P82279 1406 aa19.04■□□□□ 0.64
SHANK1-202ENST00000359082 SPHKAPQ2M3C7 1700 aa19.04■□□□□ 0.64
SHANK1-202ENST00000359082 SMNDC1O75940 238 aaKnown RBP eCLIP19.04■□□□□ 0.64
SHANK1-202ENST00000359082 ARID3BQ8IVW6 561 aaPredicted RBP19.04■□□□□ 0.64
SHANK1-202ENST00000359082 TAAR1Q96RJ0 339 aa19.04■□□□□ 0.64
SHANK1-202ENST00000359082 JMJD4Q9H9V9 463 aa19.04■□□□□ 0.64
SHANK1-202ENST00000359082 TULP4Q9NRJ4 1543 aa19.04■□□□□ 0.64
SHANK1-202ENST00000359082 NDUFB5O43674 189 aa19.04■□□□□ 0.64
SHANK1-202ENST00000359082 CSTF3Q12996 717 aaKnown RBP19.04■□□□□ 0.64
SHANK1-202ENST00000359082 DLGAP2Q9P1A6 1054 aa19.04■□□□□ 0.64
SHANK1-202ENST00000359082 TBX20Q9UMR3 447 aa19.04■□□□□ 0.64
SHANK1-202ENST00000359082 CLTCL1P53675 1640 aa19.04■□□□□ 0.64
SHANK1-202ENST00000359082 ZNF23P17027 643 aa19.04■□□□□ 0.64
SHANK1-202ENST00000359082 GLRBP48167 497 aa19.04■□□□□ 0.64
SHANK1-202ENST00000359082 NPEPPSP55786 919 aa19.04■□□□□ 0.64
SHANK1-202ENST00000359082 CUL2Q13617 745 aa19.04■□□□□ 0.64
SHANK1-202ENST00000359082 PHKG1Q16816 387 aa19.04■□□□□ 0.64
SHANK1-202ENST00000359082 GGA3Q9NZ52 723 aa19.04■□□□□ 0.64
SHANK1-202ENST00000359082 ADGRB3O60242 1522 aa19.03■□□□□ 0.64
SHANK1-202ENST00000359082 TRIM66O15016 1216 aa19.03■□□□□ 0.64
SHANK1-202ENST00000359082 EDRF1Q3B7T1 1238 aa19.03■□□□□ 0.64
SHANK1-202ENST00000359082 CASKIN2Q8WXE0 1202 aa19.03■□□□□ 0.64
SHANK1-202ENST00000359082 SENP2Q9HC62 589 aa19.03■□□□□ 0.64
SHANK1-202ENST00000359082 KCNH7Q9NS40 1196 aa19.03■□□□□ 0.64
SHANK1-202ENST00000359082 HBP1O60381 514 aa19.03■□□□□ 0.64
SHANK1-202ENST00000359082 CYLC2Q14093 348 aaPredicted RBP19.03■□□□□ 0.64
SHANK1-202ENST00000359082 GLMNQ92990 594 aa19.03■□□□□ 0.64
SHANK1-202ENST00000359082 ZNF333Q96JL9 665 aa19.03■□□□□ 0.64
SHANK1-202ENST00000359082 DDIT4Q9NX09 232 aa19.03■□□□□ 0.64
SHANK1-202ENST00000359082 RPS6KB2Q9UBS0 482 aa19.03■□□□□ 0.64
SHANK1-202ENST00000359082 ENDOD1O94919 500 aa19.03■□□□□ 0.64
SHANK1-202ENST00000359082 PYGMP11217 842 aa19.03■□□□□ 0.64
SHANK1-202ENST00000359082 HSD17B3P37058 310 aa19.03■□□□□ 0.64
SHANK1-202ENST00000359082 NCKAP1LP55160 1127 aa19.03■□□□□ 0.64
SHANK1-202ENST00000359082 ILKAPQ9H0C8 392 aaPredicted RBP19.03■□□□□ 0.64
SHANK1-202ENST00000359082 VCPKMTQ9H867 229 aa19.03■□□□□ 0.64
SHANK1-202ENST00000359082 RMND5AQ9H871 391 aa19.03■□□□□ 0.64
SHANK1-202ENST00000359082 KLRC1P26715 233 aa19.03■□□□□ 0.64
SHANK1-202ENST00000359082 RRM2P31350 389 aa19.03■□□□□ 0.64
SHANK1-202ENST00000359082 PTGISQ16647 500 aa19.03■□□□□ 0.64
SHANK1-202ENST00000359082 SBK1Q52WX2 424 aa19.03■□□□□ 0.64
SHANK1-202ENST00000359082 MAGEB10Q96LZ2 347 aaPredicted RBP19.03■□□□□ 0.64
SHANK1-202ENST00000359082 TARS2Q9BW92 718 aaKnown RBP19.03■□□□□ 0.64
SHANK1-202ENST00000359082 VHLP40337 213 aa19.03■□□□□ 0.64
SHANK1-202ENST00000359082 ANKS6Q68DC2 871 aa19.03■□□□□ 0.64
SHANK1-202ENST00000359082 FBXO36Q8NEA4 188 aa19.03■□□□□ 0.64
SHANK1-202ENST00000359082 CPB2Q96IY4 423 aa19.03■□□□□ 0.64
SHANK1-202ENST00000359082 FOXP3Q9BZS1 431 aa19.03■□□□□ 0.64
SHANK1-202ENST00000359082 COPS7BQ9H9Q2 264 aaPredicted RBP19.03■□□□□ 0.64
SHANK1-202ENST00000359082 CYP4F12Q9HCS2 524 aa19.03■□□□□ 0.64
SHANK1-202ENST00000359082 F5H5T6 163 aa19.02■□□□□ 0.64
SHANK1-202ENST00000359082 GPC1P35052 558 aa19.02■□□□□ 0.64
SHANK1-202ENST00000359082 SLC11A2P49281 568 aa19.02■□□□□ 0.64
SHANK1-202ENST00000359082 TMED10P49755 219 aaKnown RBP19.02■□□□□ 0.64
SHANK1-202ENST00000359082 SERPINB8P50452 374 aa19.02■□□□□ 0.64
SHANK1-202ENST00000359082 TSGA10IPQ3SY00 556 aa19.02■□□□□ 0.64
SHANK1-202ENST00000359082 GPRC5AQ8NFJ5 357 aa19.02■□□□□ 0.64
SHANK1-202ENST00000359082 SNRNP27Q8WVK2 155 aaKnown RBP19.02■□□□□ 0.64
SHANK1-202ENST00000359082 RPRD1AQ96P16 312 aaPredicted RBP19.02■□□□□ 0.64
SHANK1-202ENST00000359082 RNPEPQ9H4A4 650 aa19.02■□□□□ 0.64
SHANK1-202ENST00000359082 DCDC2Q9UHG0 476 aa19.02■□□□□ 0.64
SHANK1-202ENST00000359082 SMAPO00193 183 aa19.02■□□□□ 0.64
SHANK1-202ENST00000359082 MBL2P11226 248 aaPredicted RBP19.02■□□□□ 0.64
SHANK1-202ENST00000359082 THPOP40225 353 aa19.02■□□□□ 0.64
SHANK1-202ENST00000359082 TPCN2Q8NHX9 752 aa19.02■□□□□ 0.64
SHANK1-202ENST00000359082 PAPOLBQ9NRJ5 636 aaKnown RBP19.02■□□□□ 0.64
SHANK1-202ENST00000359082 SNRPFP62306 86 aaKnown RBP19.02■□□□□ 0.64
SHANK1-202ENST00000359082 POLD3Q15054 466 aaPredicted RBP19.02■□□□□ 0.64
SHANK1-202ENST00000359082 PAN2Q504Q3 1202 aaKnown RBP19.02■□□□□ 0.64
SHANK1-202ENST00000359082 TMEM39BQ9GZU3 492 aa19.02■□□□□ 0.64
SHANK1-202ENST00000359082 CDC42BPAQ5VT25 1732 aa19.02■□□□□ 0.64
SHANK1-202ENST00000359082 MTSS1O43312 755 aa19.02■□□□□ 0.63
SHANK1-202ENST00000359082 YY1P25490 414 aa19.02■□□□□ 0.63
SHANK1-202ENST00000359082 LRRC34Q8IZ02 419 aa19.02■□□□□ 0.63
SHANK1-202ENST00000359082 GJD4Q96KN9 370 aaPredicted RBP19.02■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms