RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 TMEM120AQ9BXJ8 343 aa14.24□□□□□ -0.13
VCP-201ENST00000358901 FRMD8P1Q9BZ68 369 aaPredicted RBP14.24□□□□□ -0.13
VCP-201ENST00000358901 CASS4Q9NQ75 786 aa14.24□□□□□ -0.13
VCP-201ENST00000358901 PKD2L2Q9NZM6 624 aa14.24□□□□□ -0.13
VCP-201ENST00000358901 DNAJC16Q9Y2G8 782 aa14.24□□□□□ -0.13
VCP-201ENST00000358901 TMEM131LA2VDJ0 1609 aa14.24□□□□□ -0.13
VCP-201ENST00000358901 SDR42E2A6NKP2 422 aa14.24□□□□□ -0.13
VCP-201ENST00000358901 XPO1O14980 1071 aaKnown RBP14.24□□□□□ -0.13
VCP-201ENST00000358901 GAS2O43903 313 aaKnown RBP14.24□□□□□ -0.13
VCP-201ENST00000358901 SKAP2O75563 359 aaPredicted RBP14.24□□□□□ -0.13
VCP-201ENST00000358901 C6orf222P0C671 652 aaPredicted RBP14.24□□□□□ -0.13
VCP-201ENST00000358901 ACO1P21399 889 aaKnown RBP14.24□□□□□ -0.13
VCP-201ENST00000358901 PTPN4P29074 926 aa14.24□□□□□ -0.13
VCP-201ENST00000358901 RAP1GAPP47736 663 aa14.24□□□□□ -0.13
VCP-201ENST00000358901 PTPN11Q06124 597 aaPredicted RBP14.24□□□□□ -0.13
VCP-201ENST00000358901 PPP3CAQ08209 521 aa14.24□□□□□ -0.13
VCP-201ENST00000358901 MPZL3Q6UWV2 235 aa14.24□□□□□ -0.13
VCP-201ENST00000358901 EFHBQ8N7U6 833 aa14.24□□□□□ -0.13
VCP-201ENST00000358901 FAM163AQ96GL9 167 aaPredicted RBP14.24□□□□□ -0.13
VCP-201ENST00000358901 FRMPD4Q14CM0 1322 aa14.23□□□□□ -0.13
VCP-201ENST00000358901 KIF20BQ96Q89 1820 aa14.23□□□□□ -0.13
VCP-201ENST00000358901 GJB6O95452 261 aa14.23□□□□□ -0.13
VCP-201ENST00000358901 FAM200BP0CF97 657 aa14.23□□□□□ -0.13
VCP-201ENST00000358901 CALB2P22676 271 aa14.23□□□□□ -0.13
VCP-201ENST00000358901 NFKBIAP25963 317 aa14.23□□□□□ -0.13
VCP-201ENST00000358901 ELK3P41970 407 aa14.23□□□□□ -0.13
VCP-201ENST00000358901 GCNT1Q02742 428 aa14.23□□□□□ -0.13
VCP-201ENST00000358901 FUKQ8N0W3 1084 aa14.23□□□□□ -0.13
VCP-201ENST00000358901 AGBL3Q8NEM8 1001 aa14.23□□□□□ -0.13
VCP-201ENST00000358901 TCP10LQ8TDR4 215 aa14.23□□□□□ -0.13
VCP-201ENST00000358901 DACH2Q96NX9 599 aa14.23□□□□□ -0.13
VCP-201ENST00000358901 GCNAQ96QF7 691 aa14.23□□□□□ -0.13
VCP-201ENST00000358901 TRIM54Q9BYV2 358 aa14.23□□□□□ -0.13
VCP-201ENST00000358901 LMCD1Q9NZU5 365 aa14.23□□□□□ -0.13
VCP-201ENST00000358901 DNALI1O14645 258 aaPredicted RBP14.23□□□□□ -0.13
VCP-201ENST00000358901 ESRRBO95718 433 aa14.23□□□□□ -0.13
VCP-201ENST00000358901 SLC25A27O95847 323 aa14.23□□□□□ -0.13
VCP-201ENST00000358901 PCSK1P29120 753 aa14.23□□□□□ -0.13
VCP-201ENST00000358901 PKN2Q16513 984 aaKnown RBP14.23□□□□□ -0.13
VCP-201ENST00000358901 DCAF4L1Q3SXM0 396 aa14.23□□□□□ -0.13
VCP-201ENST00000358901 ACCSLQ4AC99 568 aa14.23□□□□□ -0.13
VCP-201ENST00000358901 ZFPM1Q8IX07 1006 aa14.23□□□□□ -0.13
VCP-201ENST00000358901 CLEC4FQ8N1N0 589 aa14.23□□□□□ -0.13
VCP-201ENST00000358901 KIF17Q9P2E2 1029 aa14.23□□□□□ -0.13
VCP-201ENST00000358901 HACL1Q9UJ83 578 aa14.23□□□□□ -0.13
VCP-201ENST00000358901 DNPEPQ9ULA0 475 aa14.23□□□□□ -0.13
VCP-201ENST00000358901 ABT1Q9ULW3 272 aaKnown RBP14.23□□□□□ -0.13
VCP-201ENST00000358901 LSM8O95777 96 aaKnown RBP14.23□□□□□ -0.13
VCP-201ENST00000358901 VCAM1P19320 739 aa14.23□□□□□ -0.13
VCP-201ENST00000358901 FDFT1P37268 417 aa14.23□□□□□ -0.13
VCP-201ENST00000358901 SV2CQ496J9 727 aa14.23□□□□□ -0.13
VCP-201ENST00000358901 IL31Q6EBC2 164 aa14.23□□□□□ -0.13
VCP-201ENST00000358901 DENND1BQ6P3S1 775 aa14.23□□□□□ -0.13
VCP-201ENST00000358901 CYGBQ8WWM9 190 aa14.23□□□□□ -0.13
VCP-201ENST00000358901 HIC2Q96JB3 615 aa14.23□□□□□ -0.13
VCP-201ENST00000358901 CCT7Q99832 543 aa14.23□□□□□ -0.13
VCP-201ENST00000358901 NAT9Q9BTE0 207 aa14.23□□□□□ -0.13
VCP-201ENST00000358901 PXMP2Q9NR77 195 aa14.23□□□□□ -0.13
VCP-201ENST00000358901 TMEM247A6NEH6 219 aa14.22□□□□□ -0.13
VCP-201ENST00000358901 PBX1P40424 430 aa14.22□□□□□ -0.13
VCP-201ENST00000358901 GLRBP48167 497 aa14.22□□□□□ -0.13
VCP-201ENST00000358901 BACE1P56817 501 aa14.22□□□□□ -0.13
VCP-201ENST00000358901 DAB2P98082 770 aa14.22□□□□□ -0.13
VCP-201ENST00000358901 PDK2Q15119 407 aa14.22□□□□□ -0.13
VCP-201ENST00000358901 KIZQ2M2Z5 673 aa14.22□□□□□ -0.13
VCP-201ENST00000358901 CALML6Q8TD86 181 aa14.22□□□□□ -0.13
VCP-201ENST00000358901 EPS8L1Q8TE68 723 aa14.22□□□□□ -0.13
VCP-201ENST00000358901 ATXN2LQ8WWM7 1075 aaKnown RBP14.22□□□□□ -0.13
VCP-201ENST00000358901 TMEM237Q96Q45 408 aa14.22□□□□□ -0.13
VCP-201ENST00000358901 CAAP1Q9H8G2 361 aa14.22□□□□□ -0.13
VCP-201ENST00000358901 LATS2Q9NRM7 1088 aa14.22□□□□□ -0.13
VCP-201ENST00000358901 NSMCE4AQ9NXX6 385 aa14.22□□□□□ -0.13
VCP-201ENST00000358901 DTNAQ9Y4J8 743 aa14.22□□□□□ -0.13
VCP-201ENST00000358901 SRP72O76094 671 aaKnown RBP14.22□□□□□ -0.13
VCP-201ENST00000358901 SERPINB5P36952 375 aa14.22□□□□□ -0.13
VCP-201ENST00000358901 TAF6P49848 677 aa14.22□□□□□ -0.13
VCP-201ENST00000358901 RPL10AP62906 217 aaKnown RBP14.22□□□□□ -0.13
VCP-201ENST00000358901 TBCCQ15814 346 aa14.22□□□□□ -0.13
VCP-201ENST00000358901 EIF1ADQ8N9N8 165 aaKnown RBP14.22□□□□□ -0.13
VCP-201ENST00000358901 SCHIP1Q9P0W5 487 aaPredicted RBP14.22□□□□□ -0.13
VCP-201ENST00000358901 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.22□□□□□ -0.13
VCP-201ENST00000358901 MAGEA13PA6NCF6 341 aa14.22□□□□□ -0.13
VCP-201ENST00000358901 BCL9O00512 1426 aa14.22□□□□□ -0.13
VCP-201ENST00000358901 MAP4P27816 1152 aaKnown RBP14.22□□□□□ -0.13
VCP-201ENST00000358901 SPDYAQ5MJ70 313 aa14.22□□□□□ -0.13
VCP-201ENST00000358901 KCTD10Q9H3F6 313 aa14.22□□□□□ -0.13
VCP-201ENST00000358901 MAP3K20Q9NYL2 800 aaKnown RBP14.22□□□□□ -0.13
VCP-201ENST00000358901 CTNNAL1Q9UBT7 734 aa14.22□□□□□ -0.13
VCP-201ENST00000358901 KIAA1257Q9ULG3 409 aa14.22□□□□□ -0.13
VCP-201ENST00000358901 NEURL4Q96JN8 1562 aa14.22□□□□□ -0.13
VCP-201ENST00000358901 SHBGP04278 402 aa14.22□□□□□ -0.13
VCP-201ENST00000358901 DPEP1P16444 411 aa14.22□□□□□ -0.13
VCP-201ENST00000358901 HNRNPH3P31942 346 aaKnown RBP14.22□□□□□ -0.13
VCP-201ENST00000358901 HDAC4P56524 1084 aa14.22□□□□□ -0.13
VCP-201ENST00000358901 DLG4P78352 724 aa14.22□□□□□ -0.13
VCP-201ENST00000358901 DSG1Q02413 1049 aa14.22□□□□□ -0.13
VCP-201ENST00000358901 FUT2Q10981 343 aa14.22□□□□□ -0.13
VCP-201ENST00000358901 ZCWPW2Q504Y3 356 aa14.22□□□□□ -0.13
VCP-201ENST00000358901 NOTUMQ6P988 496 aa14.22□□□□□ -0.13
VCP-201ENST00000358901 C1orf186Q6ZWK4 172 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms