RNA–Protein interactions for RNA: ENST00000358273.8

NF1-202, Transcript of neurofibromin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NF1, Length 12,425 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-202ENST00000358273 ANKRD40Q6AI12 368 aa7.22□□□□□ -1.25
NF1-202ENST00000358273 RBM23Q86U06 439 aaKnown RBP7.22□□□□□ -1.25
NF1-202ENST00000358273 SLC8A2Q9UPR5 921 aa7.22□□□□□ -1.25
NF1-202ENST00000358273 SALL1Q9NSC2 1324 aa7.22□□□□□ -1.25
NF1-202ENST00000358273 A0A1W2PRG6 482 aa7.22□□□□□ -1.25
NF1-202ENST00000358273 PRKACAP17612 351 aa7.22□□□□□ -1.25
NF1-202ENST00000358273 KLRC1P26715 233 aa7.22□□□□□ -1.25
NF1-202ENST00000358273 CENPCQ03188 943 aa7.22□□□□□ -1.25
NF1-202ENST00000358273 GPR107Q5VW38 600 aa7.22□□□□□ -1.25
NF1-202ENST00000358273 ANKRD13DQ6ZTN6 518 aa7.22□□□□□ -1.25
NF1-202ENST00000358273 TUBGCP3Q96CW5 907 aa7.22□□□□□ -1.25
NF1-202ENST00000358273 DOCK10Q96BY6 2186 aa7.22□□□□□ -1.25
NF1-202ENST00000358273 DBTP11182 482 aaKnown RBP7.21□□□□□ -1.25
NF1-202ENST00000358273 PSMA4P25789 261 aaKnown RBP7.21□□□□□ -1.25
NF1-202ENST00000358273 DCUN1D2Q6PH85 259 aa7.21□□□□□ -1.25
NF1-202ENST00000358273 ARID3BQ8IVW6 561 aaPredicted RBP7.21□□□□□ -1.25
NF1-202ENST00000358273 ZNF555Q8NEP9 628 aa7.21□□□□□ -1.25
NF1-202ENST00000358273 CLPTM1LQ96KA5 538 aa7.21□□□□□ -1.25
NF1-202ENST00000358273 YME1L1Q96TA2 773 aa7.21□□□□□ -1.25
NF1-202ENST00000358273 FBXO28Q9NVF7 368 aa7.21□□□□□ -1.25
NF1-202ENST00000358273 GTF3C4Q9UKN8 822 aa7.21□□□□□ -1.25
NF1-202ENST00000358273 HSMCR30P0CW71 290 aa7.21□□□□□ -1.25
NF1-202ENST00000358273 SLC10A5Q5PT55 438 aa7.21□□□□□ -1.25
NF1-202ENST00000358273 FAM26FQ5R3K3 315 aa7.21□□□□□ -1.25
NF1-202ENST00000358273 WDR59Q6PJI9 974 aa7.21□□□□□ -1.25
NF1-202ENST00000358273 SLC35G2Q8TBE7 412 aa7.21□□□□□ -1.25
NF1-202ENST00000358273 PPCSQ9HAB8 311 aa7.21□□□□□ -1.25
NF1-202ENST00000358273 CUEDC1Q9NWM3 386 aaPredicted RBP7.21□□□□□ -1.25
NF1-202ENST00000358273 MKS1Q9NXB0 559 aa7.21□□□□□ -1.25
NF1-202ENST00000358273 MPP6Q9NZW5 540 aa7.21□□□□□ -1.25
NF1-202ENST00000358273 PCDH10Q9P2E7 1040 aa7.21□□□□□ -1.25
NF1-202ENST00000358273 TSR3Q9UJK0 312 aaKnown RBP7.21□□□□□ -1.25
NF1-202ENST00000358273 RAB26Q9ULW5 256 aa7.21□□□□□ -1.25
NF1-202ENST00000358273 RARGP13631 454 aa7.21□□□□□ -1.25
NF1-202ENST00000358273 ARMC4Q5T2S8 1044 aa7.21□□□□□ -1.25
NF1-202ENST00000358273 LMBR1LQ6UX01 489 aa7.21□□□□□ -1.25
NF1-202ENST00000358273 ALYREFQ86V81 257 aaKnown RBP7.21□□□□□ -1.25
NF1-202ENST00000358273 ERI1Q8IV48 349 aaKnown RBP7.21□□□□□ -1.25
NF1-202ENST00000358273 MKL1Q969V6 931 aa7.21□□□□□ -1.25
NF1-202ENST00000358273 ARMT1Q9H993 441 aa7.21□□□□□ -1.25
NF1-202ENST00000358273 FAIMQ9NVQ4 179 aa7.21□□□□□ -1.25
NF1-202ENST00000358273 ITGAXP20702 1163 aa7.21□□□□□ -1.25
NF1-202ENST00000358273 ADRA1DP25100 572 aa7.21□□□□□ -1.25
NF1-202ENST00000358273 SSTR3P32745 418 aaPredicted RBP7.21□□□□□ -1.25
NF1-202ENST00000358273 RPA3P35244 121 aaPredicted RBP7.21□□□□□ -1.25
NF1-202ENST00000358273 BFSP2Q13515 415 aa7.21□□□□□ -1.25
NF1-202ENST00000358273 MEA1Q16626 185 aa7.21□□□□□ -1.25
NF1-202ENST00000358273 NDUFAF2Q8N183 169 aa7.21□□□□□ -1.25
NF1-202ENST00000358273 WNT8AQ9H1J5 351 aa7.21□□□□□ -1.25
NF1-202ENST00000358273 C8orf4Q9NR00 106 aa7.21□□□□□ -1.25
NF1-202ENST00000358273 ZNF532Q9HCE3 1301 aa7.21□□□□□ -1.26
NF1-202ENST00000358273 M0QX08 132 aa7.21□□□□□ -1.26
NF1-202ENST00000358273 CHRNB1P11230 501 aa7.21□□□□□ -1.26
NF1-202ENST00000358273 ITGA6P23229 1130 aa7.21□□□□□ -1.26
NF1-202ENST00000358273 TOP3AQ13472 1001 aaPredicted RBP7.21□□□□□ -1.26
NF1-202ENST00000358273 SLC4A11Q8NBS3 891 aa7.21□□□□□ -1.26
NF1-202ENST00000358273 S100ZQ8WXG8 99 aa7.21□□□□□ -1.26
NF1-202ENST00000358273 PPP1R10Q96QC0 940 aaKnown RBP7.21□□□□□ -1.26
NF1-202ENST00000358273 MKNK2Q9HBH9 465 aa7.21□□□□□ -1.26
NF1-202ENST00000358273 PARVAQ9NVD7 372 aa7.21□□□□□ -1.26
NF1-202ENST00000358273 SOX13Q9UN79 622 aa7.21□□□□□ -1.26
NF1-202ENST00000358273 WDR19Q8NEZ3 1342 aa7.21□□□□□ -1.26
NF1-202ENST00000358273 GNB5O14775 395 aa7.21□□□□□ -1.26
NF1-202ENST00000358273 ATP9BO43861 1147 aa7.21□□□□□ -1.26
NF1-202ENST00000358273 TBX10O75333 385 aa7.21□□□□□ -1.26
NF1-202ENST00000358273 ARSEP51690 589 aa7.21□□□□□ -1.26
NF1-202ENST00000358273 FOXB2Q5VYV0 432 aa7.21□□□□□ -1.26
NF1-202ENST00000358273 ABTB2Q8N961 1025 aa7.21□□□□□ -1.26
NF1-202ENST00000358273 GJA10Q969M2 543 aa7.21□□□□□ -1.26
NF1-202ENST00000358273 CADM1Q9BY67 442 aaKnown RBP7.21□□□□□ -1.26
NF1-202ENST00000358273 KLHL31Q9H511 634 aa7.21□□□□□ -1.26
NF1-202ENST00000358273 EPB41L4AQ9HCS5 686 aaPredicted RBP7.21□□□□□ -1.26
NF1-202ENST00000358273 GSC2O15499 205 aa7.21□□□□□ -1.26
NF1-202ENST00000358273 CYP27B1O15528 508 aa7.21□□□□□ -1.26
NF1-202ENST00000358273 PHKA2P46019 1235 aa7.21□□□□□ -1.26
NF1-202ENST00000358273 CLK1P49759 484 aaKnown RBP7.21□□□□□ -1.26
NF1-202ENST00000358273 ENTPD1P49961 510 aa7.21□□□□□ -1.26
NF1-202ENST00000358273 SEC31BQ9NQW1 1179 aa7.21□□□□□ -1.26
NF1-202ENST00000358273 KDM3AQ9Y4C1 1321 aa7.21□□□□□ -1.26
NF1-202ENST00000358273 SOX5P35711 763 aa7.21□□□□□ -1.26
NF1-202ENST00000358273 MAGEA4P43358 317 aa7.21□□□□□ -1.26
NF1-202ENST00000358273 UBAP2LQ14157 1087 aaKnown RBP7.21□□□□□ -1.26
NF1-202ENST00000358273 CERKLQ49MI3 558 aaPredicted RBP7.21□□□□□ -1.26
NF1-202ENST00000358273 CYP2U1Q7Z449 544 aa7.21□□□□□ -1.26
NF1-202ENST00000358273 TEX13BQ9BXU2 312 aa7.21□□□□□ -1.26
NF1-202ENST00000358273 PLAGL2Q9UPG8 496 aa7.21□□□□□ -1.26
NF1-202ENST00000358273 SSU72P8A0A1W2PR75 194 aa7.21□□□□□ -1.26
NF1-202ENST00000358273 C16orf96A6NNT2 1141 aa7.21□□□□□ -1.26
NF1-202ENST00000358273 SYN2Q92777 582 aaPredicted RBP7.21□□□□□ -1.26
NF1-202ENST00000358273 ERGIC2Q96RQ1 377 aa7.21□□□□□ -1.26
NF1-202ENST00000358273 CLK4Q9HAZ1 481 aaKnown RBP7.21□□□□□ -1.26
NF1-202ENST00000358273 SIK3Q9Y2K2 1263 aa7.21□□□□□ -1.26
NF1-202ENST00000358273 UTYO14607 1347 aa7.21□□□□□ -1.26
NF1-202ENST00000358273 TM9SF1O15321 606 aa7.21□□□□□ -1.26
NF1-202ENST00000358273 RPA1P27694 616 aa7.21□□□□□ -1.26
NF1-202ENST00000358273 TMPRSS6Q8IU80 811 aa7.21□□□□□ -1.26
NF1-202ENST00000358273 RHPN2Q8IUC4 686 aa7.21□□□□□ -1.26
NF1-202ENST00000358273 ASCC1Q8N9N2 400 aaKnown RBP7.21□□□□□ -1.26
NF1-202ENST00000358273 ZNF224Q9NZL3 707 aa7.21□□□□□ -1.26
NF1-202ENST00000358273 NAALADL1Q9UQQ1 740 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms