RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 KBTBD12Q3ZCT8 623 aa10.42□□□□□ -0.74
RNF40-202ENST00000357890 SPDYE2Q495Y8 402 aa10.42□□□□□ -0.74
RNF40-202ENST00000357890 GALNTL6Q49A17 601 aa10.42□□□□□ -0.74
RNF40-202ENST00000357890 MAP3K21Q5TCX8 1036 aa10.42□□□□□ -0.74
RNF40-202ENST00000357890 TTC7BQ86TV6 843 aa10.42□□□□□ -0.74
RNF40-202ENST00000357890 RSPH3Q86UC2 560 aa10.42□□□□□ -0.74
RNF40-202ENST00000357890 TMC2Q8TDI7 906 aa10.42□□□□□ -0.74
RNF40-202ENST00000357890 GDPD5Q8WTR4 605 aa10.42□□□□□ -0.74
RNF40-202ENST00000357890 NAT14Q8WUY8 206 aa10.42□□□□□ -0.74
RNF40-202ENST00000357890 SLC7A3Q8WY07 619 aa10.42□□□□□ -0.74
RNF40-202ENST00000357890 PTPRN2Q92932 1015 aa10.42□□□□□ -0.74
RNF40-202ENST00000357890 CDHR1Q96JP9 859 aa10.42□□□□□ -0.74
RNF40-202ENST00000357890 ZMAT2Q96NC0 199 aaKnown RBP10.42□□□□□ -0.74
RNF40-202ENST00000357890 GPR88Q9GZN0 384 aa10.42□□□□□ -0.74
RNF40-202ENST00000357890 RNF146Q9NTX7 359 aa10.42□□□□□ -0.74
RNF40-202ENST00000357890 RBAKQ9NYW8 714 aaPredicted RBP10.42□□□□□ -0.74
RNF40-202ENST00000357890 PCSK1NQ9UHG2 260 aa10.42□□□□□ -0.74
RNF40-202ENST00000357890 AGO2Q9UKV8 859 aaKnown RBP10.42□□□□□ -0.74
RNF40-202ENST00000357890 NENFQ9UMX5 172 aa10.42□□□□□ -0.74
RNF40-202ENST00000357890 MTO1Q9Y2Z2 717 aaKnown RBP10.42□□□□□ -0.74
RNF40-202ENST00000357890 OATP04181 439 aa10.41□□□□□ -0.74
RNF40-202ENST00000357890 CYP1A2P05177 515 aa10.41□□□□□ -0.74
RNF40-202ENST00000357890 ZFXP17010 805 aaPredicted RBP10.41□□□□□ -0.74
RNF40-202ENST00000357890 WDR4P57081 412 aaKnown RBP10.41□□□□□ -0.74
RNF40-202ENST00000357890 HIF1AQ16665 826 aa10.41□□□□□ -0.74
RNF40-202ENST00000357890 SMTNL2Q2TAL5 461 aa10.41□□□□□ -0.74
RNF40-202ENST00000357890 ATP13A4Q4VNC1 1196 aa10.41□□□□□ -0.74
RNF40-202ENST00000357890 WDR78Q5VTH9 848 aa10.41□□□□□ -0.74
RNF40-202ENST00000357890 OLFML1Q6UWY5 402 aa10.41□□□□□ -0.74
RNF40-202ENST00000357890 C3orf62Q6ZUJ4 267 aa10.41□□□□□ -0.74
RNF40-202ENST00000357890 USP6NLQ92738 828 aa10.41□□□□□ -0.74
RNF40-202ENST00000357890 TTC25Q96NG3 672 aa10.41□□□□□ -0.74
RNF40-202ENST00000357890 MCEEQ96PE7 176 aa10.41□□□□□ -0.74
RNF40-202ENST00000357890 NR1H4Q96RI1 486 aaPredicted RBP10.41□□□□□ -0.74
RNF40-202ENST00000357890 KLHL4Q9C0H6 718 aa10.41□□□□□ -0.74
RNF40-202ENST00000357890 TXNDC16Q9P2K2 825 aa10.41□□□□□ -0.74
RNF40-202ENST00000357890 DTNAQ9Y4J8 743 aa10.41□□□□□ -0.74
RNF40-202ENST00000357890 RPS6KL1Q9Y6S9 549 aa10.41□□□□□ -0.74
RNF40-202ENST00000357890 FAM237BA0A1B0GVD1 139 aa10.41□□□□□ -0.74
RNF40-202ENST00000357890 ANKRD33BA6NCL7 494 aa10.41□□□□□ -0.74
RNF40-202ENST00000357890 FSCN2O14926 492 aa10.41□□□□□ -0.74
RNF40-202ENST00000357890 PEX1O43933 1283 aa10.41□□□□□ -0.74
RNF40-202ENST00000357890 EDF1O60869 148 aaKnown RBP10.41□□□□□ -0.74
RNF40-202ENST00000357890 BANF1O75531 89 aa10.41□□□□□ -0.74
RNF40-202ENST00000357890 DGAT1O75907 488 aa10.41□□□□□ -0.74
RNF40-202ENST00000357890 SEC24DO94855 1032 aaPredicted RBP10.41□□□□□ -0.74
RNF40-202ENST00000357890 ITGA2BP08514 1039 aa10.41□□□□□ -0.74
RNF40-202ENST00000357890 CHRNB2P17787 502 aa10.41□□□□□ -0.74
RNF40-202ENST00000357890 MLH1P40692 756 aa10.41□□□□□ -0.74
RNF40-202ENST00000357890 SERPINB8P50452 374 aa10.41□□□□□ -0.74
RNF40-202ENST00000357890 HSD17B4P51659 736 aa10.41□□□□□ -0.74
RNF40-202ENST00000357890 YARSP54577 528 aaKnown RBP10.41□□□□□ -0.74
RNF40-202ENST00000357890 ESRRGP62508 458 aa10.41□□□□□ -0.74
RNF40-202ENST00000357890 MRPS9P82933 396 aaKnown RBP10.41□□□□□ -0.74
RNF40-202ENST00000357890 ATP1A4Q13733 1029 aa10.41□□□□□ -0.74
RNF40-202ENST00000357890 PPP2R5DQ14738 602 aa10.41□□□□□ -0.74
RNF40-202ENST00000357890 MYBPC3Q14896 1274 aa10.41□□□□□ -0.74
RNF40-202ENST00000357890 HADHQ16836 314 aaKnown RBP10.41□□□□□ -0.74
RNF40-202ENST00000357890 SLC45A4Q5BKX6 768 aa10.41□□□□□ -0.74
RNF40-202ENST00000357890 TSHZ1Q6ZSZ6 1077 aa10.41□□□□□ -0.74
RNF40-202ENST00000357890 NANOGNBQ7Z5D8 188 aa10.41□□□□□ -0.74
RNF40-202ENST00000357890 NUDCD3Q8IVD9 361 aa10.41□□□□□ -0.74
RNF40-202ENST00000357890 PHC3Q8NDX5 983 aa10.41□□□□□ -0.74
RNF40-202ENST00000357890 PPP4R1Q8TF05 950 aa10.41□□□□□ -0.74
RNF40-202ENST00000357890 TMEM143Q96AN5 459 aa10.41□□□□□ -0.74
RNF40-202ENST00000357890 THAP11Q96EK4 314 aa10.41□□□□□ -0.74
RNF40-202ENST00000357890 PLEKHG4BQ96PX9 1271 aa10.41□□□□□ -0.74
RNF40-202ENST00000357890 TMEM121Q9BTD3 319 aa10.41□□□□□ -0.74
RNF40-202ENST00000357890 EBF3Q9H4W6 596 aa10.41□□□□□ -0.74
RNF40-202ENST00000357890 CAAP1Q9H8G2 361 aa10.41□□□□□ -0.74
RNF40-202ENST00000357890 C17orf75Q9HAS0 396 aa10.41□□□□□ -0.74
RNF40-202ENST00000357890 PARVAQ9NVD7 372 aa10.41□□□□□ -0.74
RNF40-202ENST00000357890 PRKAG3Q9UGI9 489 aa10.41□□□□□ -0.74
RNF40-202ENST00000357890 UBIAD1Q9Y5Z9 338 aa10.41□□□□□ -0.74
RNF40-202ENST00000357890 PROSCO94903 275 aa10.41□□□□□ -0.74
RNF40-202ENST00000357890 IMPDH2P12268 514 aa10.41□□□□□ -0.74
RNF40-202ENST00000357890 GNAZP19086 355 aa10.41□□□□□ -0.74
RNF40-202ENST00000357890 TCN1P20061 433 aaPredicted RBP10.41□□□□□ -0.74
RNF40-202ENST00000357890 GTF2H1P32780 548 aa10.41□□□□□ -0.74
RNF40-202ENST00000357890 CENPCQ03188 943 aa10.41□□□□□ -0.74
RNF40-202ENST00000357890 BAATQ14032 418 aaPredicted RBP10.41□□□□□ -0.74
RNF40-202ENST00000357890 C1orf228Q6PIY5 440 aa10.41□□□□□ -0.74
RNF40-202ENST00000357890 ALYREFQ86V81 257 aaKnown RBP10.41□□□□□ -0.74
RNF40-202ENST00000357890 RFX6Q8HWS3 928 aa10.41□□□□□ -0.74
RNF40-202ENST00000357890 ZDHHC14Q8IZN3 488 aa10.41□□□□□ -0.74
RNF40-202ENST00000357890 CCT7Q99832 543 aa10.41□□□□□ -0.74
RNF40-202ENST00000357890 SENP7Q9BQF6 1050 aa10.41□□□□□ -0.74
RNF40-202ENST00000357890 POLR3FQ9H1D9 316 aaPredicted RBP10.41□□□□□ -0.74
RNF40-202ENST00000357890 PFDN4Q9NQP4 134 aa10.41□□□□□ -0.74
RNF40-202ENST00000357890 MAP3K20Q9NYL2 800 aaKnown RBP10.41□□□□□ -0.74
RNF40-202ENST00000357890 IP6K2Q9UHH9 426 aa10.41□□□□□ -0.74
RNF40-202ENST00000357890 CCNB1P14635 433 aa10.4□□□□□ -0.74
RNF40-202ENST00000357890 NELFEP18615 380 aaKnown RBP10.4□□□□□ -0.74
RNF40-202ENST00000357890 PSMA2P25787 234 aa10.4□□□□□ -0.74
RNF40-202ENST00000357890 CDK7P50613 346 aa10.4□□□□□ -0.74
RNF40-202ENST00000357890 DCTN2Q13561 401 aaKnown RBP10.4□□□□□ -0.74
RNF40-202ENST00000357890 CCNG2Q16589 344 aa10.4□□□□□ -0.74
RNF40-202ENST00000357890 MFSD5Q6N075 450 aa10.4□□□□□ -0.74
RNF40-202ENST00000357890 PPP1R2P3Q6NXS1 205 aa10.4□□□□□ -0.74
RNF40-202ENST00000357890 SCYL2Q6P3W7 929 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms