RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 HHLA1C9JL84 531 aa26.84■■□□□ 1.89
SSBP3-202ENST00000357475 PIK3R2O00459 728 aa26.84■■□□□ 1.89
SSBP3-202ENST00000357475 UNGP13051 313 aaPredicted RBP26.84■■□□□ 1.89
SSBP3-202ENST00000357475 GRIK1P39086 918 aa26.84■■□□□ 1.89
SSBP3-202ENST00000357475 MAGEA11P43364 429 aa26.84■■□□□ 1.89
SSBP3-202ENST00000357475 RGS7P49802 495 aa26.84■■□□□ 1.89
SSBP3-202ENST00000357475 CCZ1BP86790 482 aa26.84■■□□□ 1.89
SSBP3-202ENST00000357475 CCZ1P86791 482 aaPredicted RBP26.84■■□□□ 1.89
SSBP3-202ENST00000357475 CLEC16AQ2KHT3 1053 aa26.84■■□□□ 1.89
SSBP3-202ENST00000357475 PMF1Q6P1K2 205 aa26.84■■□□□ 1.89
SSBP3-202ENST00000357475 KREMEN2Q8NCW0 462 aa26.84■■□□□ 1.89
SSBP3-202ENST00000357475 NSUN3Q9H649 340 aaKnown RBP26.84■■□□□ 1.89
SSBP3-202ENST00000357475 IGFLR1Q9H665 355 aa26.84■■□□□ 1.89
SSBP3-202ENST00000357475 YIPF1Q9Y548 306 aa26.84■■□□□ 1.89
SSBP3-202ENST00000357475 TMCO5BA8MYB1 307 aa26.83■■□□□ 1.89
SSBP3-202ENST00000357475 PRRG1O14668 218 aa26.83■■□□□ 1.89
SSBP3-202ENST00000357475 CDH5P33151 784 aaPredicted RBP26.83■■□□□ 1.89
SSBP3-202ENST00000357475 KIF11P52732 1056 aa26.83■■□□□ 1.89
SSBP3-202ENST00000357475 HYAL1Q12794 435 aa26.83■■□□□ 1.89
SSBP3-202ENST00000357475 C2CD6Q53TS8 623 aa26.83■■□□□ 1.89
SSBP3-202ENST00000357475 PIGZQ86VD9 579 aa26.83■■□□□ 1.89
SSBP3-202ENST00000357475 TCEAL8Q8IYN2 117 aa26.83■■□□□ 1.89
SSBP3-202ENST00000357475 SLC7A14Q8TBB6 771 aa26.83■■□□□ 1.89
SSBP3-202ENST00000357475 DMAP1Q9NPF5 467 aaPredicted RBP26.83■■□□□ 1.89
SSBP3-202ENST00000357475 NENFQ9UMX5 172 aa26.83■■□□□ 1.89
SSBP3-202ENST00000357475 ZNF263O14978 683 aa26.82■■□□□ 1.88
SSBP3-202ENST00000357475 IGFBP4P22692 258 aa26.82■■□□□ 1.88
SSBP3-202ENST00000357475 VSTM1Q6UX27 236 aa26.82■■□□□ 1.88
SSBP3-202ENST00000357475 TMTC1Q8IUR5 882 aa26.82■■□□□ 1.88
SSBP3-202ENST00000357475 CCDC42Q96M95 316 aa26.82■■□□□ 1.88
SSBP3-202ENST00000357475 DEF6Q9H4E7 631 aa26.82■■□□□ 1.88
SSBP3-202ENST00000357475 MAN1C1Q9NR34 630 aa26.82■■□□□ 1.88
SSBP3-202ENST00000357475 INSL5Q9Y5Q6 135 aa26.82■■□□□ 1.88
SSBP3-202ENST00000357475 XPO1O14980 1071 aaKnown RBP26.81■■□□□ 1.88
SSBP3-202ENST00000357475 LINC01565O15544 149 aa26.81■■□□□ 1.88
SSBP3-202ENST00000357475 SETSIPP0DME0 302 aa26.81■■□□□ 1.88
SSBP3-202ENST00000357475 ELF1P32519 619 aa26.81■■□□□ 1.88
SSBP3-202ENST00000357475 KCNC3Q14003 757 aa26.81■■□□□ 1.88
SSBP3-202ENST00000357475 TMEM35BQ8NCS4 154 aa26.81■■□□□ 1.88
SSBP3-202ENST00000357475 GIPC2Q8TF65 315 aa26.81■■□□□ 1.88
SSBP3-202ENST00000357475 CPXM1Q96SM3 734 aa26.81■■□□□ 1.88
SSBP3-202ENST00000357475 AKR1B10O60218 316 aa26.8■■□□□ 1.88
SSBP3-202ENST00000357475 LSM8O95777 96 aaKnown RBP26.8■■□□□ 1.88
SSBP3-202ENST00000357475 C8AP07357 584 aa26.8■■□□□ 1.88
SSBP3-202ENST00000357475 PLA2G4AP47712 749 aa26.8■■□□□ 1.88
SSBP3-202ENST00000357475 TWF1Q12792 350 aa26.8■■□□□ 1.88
SSBP3-202ENST00000357475 PDCLQ13371 301 aa26.8■■□□□ 1.88
SSBP3-202ENST00000357475 PTPN20Q4JDL3 420 aa26.8■■□□□ 1.88
SSBP3-202ENST00000357475 TRIM72Q6ZMU5 477 aa26.8■■□□□ 1.88
SSBP3-202ENST00000357475 C8orf48Q96LL4 319 aa26.8■■□□□ 1.88
SSBP3-202ENST00000357475 LMCD1Q9NZU5 365 aa26.8■■□□□ 1.88
SSBP3-202ENST00000357475 ZNF638Q14966 1978 aaKnown RBP26.8■■□□□ 1.88
SSBP3-202ENST00000357475 RFPL2O75678 378 aa26.8■■□□□ 1.88
SSBP3-202ENST00000357475 MTMR3Q13615 1198 aa26.8■■□□□ 1.88
SSBP3-202ENST00000357475 SLC18A3Q16572 532 aa26.8■■□□□ 1.88
SSBP3-202ENST00000357475 SCAMP5Q8TAC9 235 aa26.8■■□□□ 1.88
SSBP3-202ENST00000357475 MYLIPQ8WY64 445 aa26.8■■□□□ 1.88
SSBP3-202ENST00000357475 HSFX1Q9UBD0 423 aa26.8■■□□□ 1.88
SSBP3-202ENST00000357475 NAGPAQ9UK23 515 aa26.8■■□□□ 1.88
SSBP3-202ENST00000357475 CEP83Q9Y592 693 aa26.8■■□□□ 1.88
SSBP3-202ENST00000357475 MYO16Q9Y6X6 1858 aa26.79■■□□□ 1.88
SSBP3-202ENST00000357475 DOCK6Q96HP0 2047 aa26.79■■□□□ 1.88
SSBP3-202ENST00000357475 TNFRSF10BO14763 440 aa26.79■■□□□ 1.88
SSBP3-202ENST00000357475 TRIM66O15016 1216 aa26.79■■□□□ 1.88
SSBP3-202ENST00000357475 GLP2RO95838 553 aa26.79■■□□□ 1.88
SSBP3-202ENST00000357475 POU3F3P20264 500 aaPredicted RBP26.79■■□□□ 1.88
SSBP3-202ENST00000357475 TUFMP49411 452 aaKnown RBP26.79■■□□□ 1.88
SSBP3-202ENST00000357475 USP46P62068 366 aa26.79■■□□□ 1.88
SSBP3-202ENST00000357475 CENPCQ03188 943 aa26.79■■□□□ 1.88
SSBP3-202ENST00000357475 VPS36Q86VN1 386 aa26.79■■□□□ 1.88
SSBP3-202ENST00000357475 ST7Q9NRC1 585 aa26.79■■□□□ 1.88
SSBP3-202ENST00000357475 ERBB2P04626 1255 aa26.78■■□□□ 1.88
SSBP3-202ENST00000357475 CYP4A22Q5TCH4 519 aa26.78■■□□□ 1.88
SSBP3-202ENST00000357475 ACAD10Q6JQN1 1059 aa26.78■■□□□ 1.88
SSBP3-202ENST00000357475 PHLDB2Q86SQ0 1253 aa26.78■■□□□ 1.88
SSBP3-202ENST00000357475 MICALL1Q8N3F8 863 aa26.78■■□□□ 1.88
SSBP3-202ENST00000357475 PPP1R13BQ96KQ4 1090 aa26.78■■□□□ 1.88
SSBP3-202ENST00000357475 GUCD1Q96NT3 240 aa26.78■■□□□ 1.88
SSBP3-202ENST00000357475 SLC4A5Q9BY07 1137 aa26.78■■□□□ 1.88
SSBP3-202ENST00000357475 MAFFQ9ULX9 164 aa26.78■■□□□ 1.88
SSBP3-202ENST00000357475 E5RJQ4 531 aa26.77■■□□□ 1.88
SSBP3-202ENST00000357475 LCP1P13796 627 aa26.77■■□□□ 1.88
SSBP3-202ENST00000357475 ANXA13P27216 316 aa26.77■■□□□ 1.88
SSBP3-202ENST00000357475 SLC5A3P53794 718 aa26.77■■□□□ 1.88
SSBP3-202ENST00000357475 SLC8A3P57103 927 aa26.77■■□□□ 1.88
SSBP3-202ENST00000357475 IFRD2Q12894 506 aaPredicted RBP26.77■■□□□ 1.88
SSBP3-202ENST00000357475 PTP4A2Q12974 167 aa26.77■■□□□ 1.88
SSBP3-202ENST00000357475 CCDC122Q5T0U0 273 aa26.77■■□□□ 1.88
SSBP3-202ENST00000357475 LIN9Q5TKA1 542 aa26.77■■□□□ 1.88
SSBP3-202ENST00000357475 ALKBH5Q6P6C2 394 aaKnown RBP26.77■■□□□ 1.88
SSBP3-202ENST00000357475 MMS22LQ6ZRQ5 1243 aa26.77■■□□□ 1.88
SSBP3-202ENST00000357475 NDRG1Q92597 394 aaKnown RBP26.77■■□□□ 1.88
SSBP3-202ENST00000357475 CDX2Q99626 313 aaPredicted RBP26.77■■□□□ 1.88
SSBP3-202ENST00000357475 C11orf70Q9BRQ4 267 aa26.77■■□□□ 1.88
SSBP3-202ENST00000357475 PACSIN1Q9BY11 444 aa26.77■■□□□ 1.88
SSBP3-202ENST00000357475 REXO2Q9Y3B8 237 aaKnown RBP26.77■■□□□ 1.88
SSBP3-202ENST00000357475 EPN1Q9Y6I3 576 aaPredicted RBP26.77■■□□□ 1.88
SSBP3-202ENST00000357475 XIRP2A4UGR9 3374 aa26.77■■□□□ 1.88
SSBP3-202ENST00000357475 NDUFA10O95299 355 aa26.76■■□□□ 1.87
SSBP3-202ENST00000357475 FTLP02792 175 aaPredicted RBP26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms