RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 MAP4K3Q8IVH8 894 aa8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 KATNAL2Q8IYT4 538 aa8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 ST13P4Q8IZP2 240 aaPredicted RBP8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 FBXO36Q8NEA4 188 aa8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 CFAP61Q8NHU2 1237 aa8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 ZBTB45Q96K62 511 aaPredicted RBP8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 FAM161BQ96MY7 647 aa8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 ZNF184Q99676 751 aaPredicted RBP8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 AVENQ9NQS1 362 aaPredicted RBP8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 IL1RAPL1Q9NZN1 696 aa8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 PCSK1NQ9UHG2 260 aa8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 ZNF180Q9UJW8 692 aa8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 TMED5Q9Y3A6 229 aa8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 ATRNL1Q5VV63 1379 aa8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 LRRIQ4A6NIV6 560 aa8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 H3BRJ5 948 aa8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 PRPF4O43172 522 aaKnown RBP eCLIP8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 CCNE2O96020 404 aa8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 BGNP21810 368 aa8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 PHBP35232 272 aa8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 GDF10P55107 478 aa8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 MTTPP55157 894 aa8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 NCKAP1LP55160 1127 aa8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 YWHAGP61981 247 aaKnown RBP eCLIP8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 NOMO3P69849 1222 aa8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 KDSRQ06136 332 aa8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 WDR72Q3MJ13 1102 aa8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 MTERF2Q49AM1 385 aa8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 MSS51Q4VC12 460 aa8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 SLC45A4Q5BKX6 768 aa8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 ACSBG2Q5FVE4 666 aa8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 FNBP1LQ5T0N5 605 aa8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 STRIP1Q5VSL9 837 aa8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 TDRD10Q5VZ19 366 aaKnown RBP8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 SCARA3Q6AZY7 606 aa8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 SWSAP1Q6NVH7 229 aa8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 B3GNT9Q6UX72 402 aa8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 DPH6Q7L8W6 267 aa8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 NMD3Q96D46 503 aaKnown RBP8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 SLITRK1Q96PX8 696 aa8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 RMDN3Q96TC7 470 aa8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 ZNF341Q9BYN7 854 aa8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 TMEM39BQ9GZU3 492 aa8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 PFDN4Q9NQP4 134 aa8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 PARVAQ9NVD7 372 aa8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 EURLQ9NYK6 297 aa8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 SENP1Q9P0U3 644 aa8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 BTBD7Q9P203 1132 aa8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 COQ4Q9Y3A0 265 aa8.61□□□□□ -1.03
CDC42SE1-201ENST00000357235 WDR64B1ANS9 1081 aa8.6□□□□□ -1.03
CDC42SE1-201ENST00000357235 C2CD2LO14523 706 aa8.6□□□□□ -1.03
CDC42SE1-201ENST00000357235 TYROBPO43914 113 aa8.6□□□□□ -1.03
CDC42SE1-201ENST00000357235 ENO1P06733 434 aaKnown RBP8.6□□□□□ -1.03
CDC42SE1-201ENST00000357235 ABHD2P08910 425 aa8.6□□□□□ -1.03
CDC42SE1-201ENST00000357235 MYL2P10916 166 aa8.6□□□□□ -1.03
CDC42SE1-201ENST00000357235 NPR1P16066 1061 aa8.6□□□□□ -1.03
CDC42SE1-201ENST00000357235 GTF2H1P32780 548 aa8.6□□□□□ -1.03
CDC42SE1-201ENST00000357235 GPX6P59796 221 aa8.6□□□□□ -1.03
CDC42SE1-201ENST00000357235 RPS6P62753 249 aaKnown RBP8.6□□□□□ -1.03
CDC42SE1-201ENST00000357235 IRX4P78413 519 aa8.6□□□□□ -1.03
CDC42SE1-201ENST00000357235 SLC34A1Q06495 639 aa8.6□□□□□ -1.03
CDC42SE1-201ENST00000357235 CYLC2Q14093 348 aaPredicted RBP8.6□□□□□ -1.03
CDC42SE1-201ENST00000357235 LRRC36Q1X8D7 754 aa8.6□□□□□ -1.03
CDC42SE1-201ENST00000357235 ZBTB41Q5SVQ8 909 aa8.6□□□□□ -1.03
CDC42SE1-201ENST00000357235 SPOCD1Q6ZMY3 1216 aa8.6□□□□□ -1.03
CDC42SE1-201ENST00000357235 RCOR2Q8IZ40 523 aa8.6□□□□□ -1.03
CDC42SE1-201ENST00000357235 ABRAQ8N0Z2 381 aa8.6□□□□□ -1.03
CDC42SE1-201ENST00000357235 SLC25A41Q8N5S1 370 aa8.6□□□□□ -1.03
CDC42SE1-201ENST00000357235 ALLCQ8N6M5 410 aa8.6□□□□□ -1.03
CDC42SE1-201ENST00000357235 TUBGCP5Q96RT8 1024 aa8.6□□□□□ -1.03
CDC42SE1-201ENST00000357235 TTC1Q99614 292 aa8.6□□□□□ -1.03
CDC42SE1-201ENST00000357235 TMEM120AQ9BXJ8 343 aa8.6□□□□□ -1.03
CDC42SE1-201ENST00000357235 TELO2Q9Y4R8 837 aa8.6□□□□□ -1.03
CDC42SE1-201ENST00000357235 SCINQ9Y6U3 715 aa8.6□□□□□ -1.03
CDC42SE1-201ENST00000357235 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.6□□□□□ -1.03
CDC42SE1-201ENST00000357235 KAT6AQ92794 2004 aa8.6□□□□□ -1.03
CDC42SE1-201ENST00000357235 FAM237BA0A1B0GVD1 139 aa8.6□□□□□ -1.03
CDC42SE1-201ENST00000357235 TCRBV7S3A2A0A539 114 aa8.6□□□□□ -1.03
CDC42SE1-201ENST00000357235 MAGEB2O15479 319 aa8.6□□□□□ -1.03
CDC42SE1-201ENST00000357235 CST8O60676 142 aa8.6□□□□□ -1.03
CDC42SE1-201ENST00000357235 TBX10O75333 385 aa8.6□□□□□ -1.03
CDC42SE1-201ENST00000357235 ZWINTO95229 277 aa8.6□□□□□ -1.03
CDC42SE1-201ENST00000357235 MAP3K6O95382 1288 aa8.6□□□□□ -1.03
CDC42SE1-201ENST00000357235 PABPC4LP0CB38 370 aaKnown RBP8.6□□□□□ -1.03
CDC42SE1-201ENST00000357235 MAPTP10636 758 aaKnown RBP8.6□□□□□ -1.03
CDC42SE1-201ENST00000357235 BAG6P46379 1132 aa8.6□□□□□ -1.03
CDC42SE1-201ENST00000357235 OTUD4Q01804 1114 aaKnown RBP8.6□□□□□ -1.03
CDC42SE1-201ENST00000357235 PTPRJQ12913 1337 aa8.6□□□□□ -1.03
CDC42SE1-201ENST00000357235 CUL2Q13617 745 aa8.6□□□□□ -1.03
CDC42SE1-201ENST00000357235 MORF4L2Q15014 288 aa8.6□□□□□ -1.03
CDC42SE1-201ENST00000357235 SMAD1Q15797 465 aaKnown RBP8.6□□□□□ -1.03
CDC42SE1-201ENST00000357235 ARHGEF16Q5VV41 709 aa8.6□□□□□ -1.03
CDC42SE1-201ENST00000357235 TMEM53Q6P2H8 277 aa8.6□□□□□ -1.03
CDC42SE1-201ENST00000357235 C10orf71Q711Q0 1435 aa8.6□□□□□ -1.03
CDC42SE1-201ENST00000357235 ENOSF1Q7L5Y1 443 aa8.6□□□□□ -1.03
CDC42SE1-201ENST00000357235 ALYREFQ86V81 257 aaKnown RBP8.6□□□□□ -1.03
CDC42SE1-201ENST00000357235 FAM71DQ8N9W8 422 aa8.6□□□□□ -1.03
CDC42SE1-201ENST00000357235 ACTL9Q8TC94 416 aa8.6□□□□□ -1.03
CDC42SE1-201ENST00000357235 NRG4Q8WWG1 115 aa8.6□□□□□ -1.03
CDC42SE1-201ENST00000357235 TMEM143Q96AN5 459 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms