RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 NEMP1O14524 444 aa13.08□□□□□ -0.32
BDNF-202ENST00000356660 MAFGO15525 162 aa13.08□□□□□ -0.32
BDNF-202ENST00000356660 HNRNPRO43390 633 aaKnown RBP13.08□□□□□ -0.32
BDNF-202ENST00000356660 EDIL3O43854 480 aa13.08□□□□□ -0.32
BDNF-202ENST00000356660 OATP04181 439 aa13.08□□□□□ -0.32
BDNF-202ENST00000356660 CYP3A7P24462 503 aa13.08□□□□□ -0.32
BDNF-202ENST00000356660 VCPP55072 806 aaKnown RBP13.08□□□□□ -0.32
BDNF-202ENST00000356660 TTC13Q8NBP0 860 aa13.08□□□□□ -0.32
BDNF-202ENST00000356660 STX18Q9P2W9 335 aaKnown RBP13.08□□□□□ -0.32
BDNF-202ENST00000356660 CASQ2O14958 399 aaPredicted RBP13.07□□□□□ -0.32
BDNF-202ENST00000356660 SNRPAP09012 282 aaKnown RBP13.07□□□□□ -0.32
BDNF-202ENST00000356660 KRT3P12035 628 aa13.07□□□□□ -0.32
BDNF-202ENST00000356660 RBM15BQ8NDT2 890 aaKnown RBP13.07□□□□□ -0.32
BDNF-202ENST00000356660 SRPK1Q96SB4 655 aaKnown RBP13.07□□□□□ -0.32
BDNF-202ENST00000356660 ECSITQ9BQ95 431 aa13.07□□□□□ -0.32
BDNF-202ENST00000356660 RPAP3Q9H6T3 665 aaPredicted RBP13.07□□□□□ -0.32
BDNF-202ENST00000356660 DMAP1Q9NPF5 467 aaPredicted RBP13.07□□□□□ -0.32
BDNF-202ENST00000356660 TBC1D22BQ9NU19 505 aa13.07□□□□□ -0.32
BDNF-202ENST00000356660 TAGLN3Q9UI15 199 aa13.07□□□□□ -0.32
BDNF-202ENST00000356660 FEM1BQ9UK73 627 aa13.07□□□□□ -0.32
BDNF-202ENST00000356660 SSX2IPQ9Y2D8 614 aa13.07□□□□□ -0.32
BDNF-202ENST00000356660 KBTBD13C9JR72 458 aa13.07□□□□□ -0.32
BDNF-202ENST00000356660 TM9SF1O15321 606 aa13.07□□□□□ -0.32
BDNF-202ENST00000356660 KCNN4O15554 427 aa13.07□□□□□ -0.32
BDNF-202ENST00000356660 LIASO43766 372 aa13.07□□□□□ -0.32
BDNF-202ENST00000356660 CALB1P05937 261 aa13.07□□□□□ -0.32
BDNF-202ENST00000356660 PPM1FP49593 454 aaPredicted RBP13.07□□□□□ -0.32
BDNF-202ENST00000356660 SNX16P57768 344 aa13.07□□□□□ -0.32
BDNF-202ENST00000356660 PSMC5P62195 406 aa13.07□□□□□ -0.32
BDNF-202ENST00000356660 R3HDM1Q15032 1099 aaKnown RBP13.07□□□□□ -0.32
BDNF-202ENST00000356660 TFDP3Q5H9I0 405 aa13.07□□□□□ -0.32
BDNF-202ENST00000356660 TMCO4Q5TGY1 634 aa13.07□□□□□ -0.32
BDNF-202ENST00000356660 CDR2LQ86X02 465 aaPredicted RBP13.07□□□□□ -0.32
BDNF-202ENST00000356660 EMC1Q8N766 993 aa13.07□□□□□ -0.32
BDNF-202ENST00000356660 FAM192AQ9GZU8 254 aa13.07□□□□□ -0.32
BDNF-202ENST00000356660 KCND2Q9NZV8 630 aa13.07□□□□□ -0.32
BDNF-202ENST00000356660 AGO2Q9UKV8 859 aaKnown RBP13.07□□□□□ -0.32
BDNF-202ENST00000356660 ABLIM1O14639 778 aa13.07□□□□□ -0.32
BDNF-202ENST00000356660 ZMPSTE24O75844 475 aa13.07□□□□□ -0.32
BDNF-202ENST00000356660 HSPA4LO95757 839 aa13.07□□□□□ -0.32
BDNF-202ENST00000356660 RARRES1P49788 294 aa13.07□□□□□ -0.32
BDNF-202ENST00000356660 HIRAP54198 1017 aaPredicted RBP13.07□□□□□ -0.32
BDNF-202ENST00000356660 ROR1Q01973 937 aa13.07□□□□□ -0.32
BDNF-202ENST00000356660 UBAP2LQ14157 1087 aaKnown RBP13.07□□□□□ -0.32
BDNF-202ENST00000356660 EFHC1Q5JVL4 640 aa13.07□□□□□ -0.32
BDNF-202ENST00000356660 RNF148Q8N7C7 305 aa13.07□□□□□ -0.32
BDNF-202ENST00000356660 OTUD5Q96G74 571 aa13.07□□□□□ -0.32
BDNF-202ENST00000356660 TUBGCP5Q96RT8 1024 aa13.07□□□□□ -0.32
BDNF-202ENST00000356660 HERPUD2Q9BSE4 406 aa13.07□□□□□ -0.32
BDNF-202ENST00000356660 GALNT8Q9NY28 637 aa13.07□□□□□ -0.32
BDNF-202ENST00000356660 NOCTQ9UK39 431 aaKnown RBP13.07□□□□□ -0.32
BDNF-202ENST00000356660 A8MXQ7 604 aa13.06□□□□□ -0.32
BDNF-202ENST00000356660 XPO1O14980 1071 aaKnown RBP13.06□□□□□ -0.32
BDNF-202ENST00000356660 CLPTM1O96005 669 aa13.06□□□□□ -0.32
BDNF-202ENST00000356660 PROCP04070 461 aa13.06□□□□□ -0.32
BDNF-202ENST00000356660 GNAZP19086 355 aa13.06□□□□□ -0.32
BDNF-202ENST00000356660 NPTX2P47972 431 aa13.06□□□□□ -0.32
BDNF-202ENST00000356660 RTP1P59025 263 aa13.06□□□□□ -0.32
BDNF-202ENST00000356660 SPIRE1Q08AE8 756 aa13.06□□□□□ -0.32
BDNF-202ENST00000356660 SAMD7Q7Z3H4 446 aa13.06□□□□□ -0.32
BDNF-202ENST00000356660 GDPD5Q8WTR4 605 aa13.06□□□□□ -0.32
BDNF-202ENST00000356660 GPR88Q9GZN0 384 aa13.06□□□□□ -0.32
BDNF-202ENST00000356660 HERC5Q9UII4 1024 aaKnown RBP13.06□□□□□ -0.32
BDNF-202ENST00000356660 SHOC2Q9UQ13 582 aa13.06□□□□□ -0.32
BDNF-202ENST00000356660 DTNAQ9Y4J8 743 aa13.06□□□□□ -0.32
BDNF-202ENST00000356660 M0QZ92 97 aa13.06□□□□□ -0.32
BDNF-202ENST00000356660 SUPT3HO75486 399 aa13.06□□□□□ -0.32
BDNF-202ENST00000356660 GRAP2O75791 330 aa13.06□□□□□ -0.32
BDNF-202ENST00000356660 SNHG28P0DPA3 235 aa13.06□□□□□ -0.32
BDNF-202ENST00000356660 COPAP53621 1224 aa13.06□□□□□ -0.32
BDNF-202ENST00000356660 BST1Q10588 318 aa13.06□□□□□ -0.32
BDNF-202ENST00000356660 STXBP2Q15833 593 aa13.06□□□□□ -0.32
BDNF-202ENST00000356660 GPAT2Q6NUI2 795 aa13.06□□□□□ -0.32
BDNF-202ENST00000356660 MTHFD1LQ6UB35 978 aa13.06□□□□□ -0.32
BDNF-202ENST00000356660 TRIM72Q6ZMU5 477 aa13.06□□□□□ -0.32
BDNF-202ENST00000356660 MARK2Q7KZI7 788 aaKnown RBP13.06□□□□□ -0.32
BDNF-202ENST00000356660 ULK2Q8IYT8 1036 aa13.06□□□□□ -0.32
BDNF-202ENST00000356660 MCPH1Q8NEM0 835 aa13.06□□□□□ -0.32
BDNF-202ENST00000356660 PRR11Q96HE9 360 aaPredicted RBP13.06□□□□□ -0.32
BDNF-202ENST00000356660 PCDHAC2Q9Y5I4 1007 aa13.06□□□□□ -0.32
BDNF-202ENST00000356660 PRPF4O43172 522 aaKnown RBP eCLIP13.06□□□□□ -0.32
BDNF-202ENST00000356660 ORC1Q13415 861 aa13.06□□□□□ -0.32
BDNF-202ENST00000356660 ART3Q13508 389 aa13.06□□□□□ -0.32
BDNF-202ENST00000356660 LIN52Q52LA3 116 aa13.06□□□□□ -0.32
BDNF-202ENST00000356660 DEFB107AQ8IZN7 70 aa13.06□□□□□ -0.32
BDNF-202ENST00000356660 C12orf50Q8NA57 414 aaPredicted RBP13.06□□□□□ -0.32
BDNF-202ENST00000356660 CDKL2Q92772 493 aa13.06□□□□□ -0.32
BDNF-202ENST00000356660 DNAJC1Q96KC8 554 aaKnown RBP13.06□□□□□ -0.32
BDNF-202ENST00000356660 SCYL1Q96KG9 808 aa13.06□□□□□ -0.32
BDNF-202ENST00000356660 MIPEPQ99797 713 aa13.06□□□□□ -0.32
BDNF-202ENST00000356660 DNAJC16Q9Y2G8 782 aa13.06□□□□□ -0.32
BDNF-202ENST00000356660 PCDHA10Q9Y5I2 948 aa13.06□□□□□ -0.32
BDNF-202ENST00000356660 RPS6KL1Q9Y6S9 549 aa13.06□□□□□ -0.32
BDNF-202ENST00000356660 A6NJR5 290 aa13.05□□□□□ -0.32
BDNF-202ENST00000356660 PRR5-ARHGAP8B1AHC4 643 aa13.05□□□□□ -0.32
BDNF-202ENST00000356660 KRT7P08729 469 aa13.05□□□□□ -0.32
BDNF-202ENST00000356660 ENO3P13929 434 aaPredicted RBP13.05□□□□□ -0.32
BDNF-202ENST00000356660 RPL10AP62906 217 aaKnown RBP13.05□□□□□ -0.32
BDNF-202ENST00000356660 ARHGAP8P85298 464 aa13.05□□□□□ -0.32
BDNF-202ENST00000356660 DENND5BQ6ZUT9 1274 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms