RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 ZCCHC2Q9C0B9 1178 aaKnown RBP5.74□□□□□ -1.49
PTPRD-202ENST00000356435 RNF112Q9ULX5 631 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 FAM50BQ9Y247 325 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 P4HA2O15460 535 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 SEC24DO94855 1032 aaPredicted RBP5.74□□□□□ -1.49
PTPRD-202ENST00000356435 APRTP07741 180 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 FGFR4P22455 802 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 NMT1P30419 496 aaKnown RBP5.74□□□□□ -1.49
PTPRD-202ENST00000356435 HNRNPH1P31943 449 aaKnown RBP5.74□□□□□ -1.49
PTPRD-202ENST00000356435 PTGER2P43116 358 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 FMO5P49326 533 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 ACOT2P49753 483 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 CREMQ03060 361 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 CDC16Q13042 620 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 PTK7Q13308 1070 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 PAN2Q504Q3 1202 aaKnown RBP5.74□□□□□ -1.49
PTPRD-202ENST00000356435 PLA2G4FQ68DD2 849 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 KDM7AQ6ZMT4 941 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 DPP10Q8N608 796 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 RPRD1AQ96P16 312 aaPredicted RBP5.74□□□□□ -1.49
PTPRD-202ENST00000356435 TRIT1Q9H3H1 467 aaKnown RBP5.74□□□□□ -1.49
PTPRD-202ENST00000356435 VCPKMTQ9H867 229 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 GBA2Q9HCG7 927 aaPredicted RBP5.74□□□□□ -1.49
PTPRD-202ENST00000356435 TMEM8AQ9HCN3 771 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 SCN3BQ9NY72 215 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 MTMR4Q9NYA4 1195 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.74□□□□□ -1.49
PTPRD-202ENST00000356435 CDY2AQ9Y6F7 541 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 CDY1Q9Y6F8 540 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 RPN2P04844 631 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 PTPN3P26045 913 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 GPC1P35052 558 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 ILF2Q12905 390 aaKnown RBP5.74□□□□□ -1.49
PTPRD-202ENST00000356435 STX3Q13277 289 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 ITGA9Q13797 1035 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 BYSLQ13895 437 aaKnown RBP5.74□□□□□ -1.49
PTPRD-202ENST00000356435 CLEC16AQ2KHT3 1053 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 CEP78Q5JTW2 689 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 ZCCHC8Q6NZY4 707 aaKnown RBP5.74□□□□□ -1.49
PTPRD-202ENST00000356435 RSPH1Q8WYR4 309 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 FOXP3Q9BZS1 431 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 DDX47Q9H0S4 455 aaKnown RBP5.74□□□□□ -1.49
PTPRD-202ENST00000356435 CARD9Q9H257 536 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 MROH8Q9H579 483 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 NPHP3-ACAD11A0A0J9YXS1 232 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 H0YC42 278 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 PPP1R37O75864 691 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 PCDH8O95206 1070 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 MYL4P12829 197 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 ATP2C1P98194 919 aaPredicted RBP5.74□□□□□ -1.49
PTPRD-202ENST00000356435 IYDQ6PHW0 289 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 LRIG3Q6UXM1 1119 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 ZNF655Q8N720 491 aaPredicted RBP5.74□□□□□ -1.49
PTPRD-202ENST00000356435 REPS1Q96D71 796 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 RIT2Q99578 217 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 C1QTNF7Q9BXJ2 289 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 POLE3Q9NRF9 147 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 M0R3G1 203 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 AGTP01019 485 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 NFICP08651 508 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 ZNF200P98182 395 aaPredicted RBP5.74□□□□□ -1.49
PTPRD-202ENST00000356435 FAM83EQ2M2I3 478 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 C12orf60Q5U649 245 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 CDKAL1Q5VV42 579 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 DDI1Q8WTU0 396 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 FAM84BQ96KN1 310 aaPredicted RBP5.74□□□□□ -1.49
PTPRD-202ENST00000356435 PNKPQ96T60 521 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 REEP2Q9BRK0 252 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 FRMD8P1Q9BZ68 369 aaPredicted RBP5.74□□□□□ -1.49
PTPRD-202ENST00000356435 CRTAMO95727 393 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 CYP2A6P11509 494 aaPredicted RBP5.74□□□□□ -1.49
PTPRD-202ENST00000356435 UQCRBP14927 111 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 PSEN1P49768 467 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 CNGA3Q16281 694 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 ADGRF2Q8IZF7 708 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 CYP4Z2PQ8N1L4 340 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 KCNK16Q96T55 309 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 CLPBQ9H078 707 aa5.74□□□□□ -1.49
PTPRD-202ENST00000356435 PITPNM2Q9BZ72 1349 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 A0A088AWK7 358 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 CFAP73A6NFT4 308 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 RNF103O00237 685 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 NDUFB10O96000 172 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 ZNF10P21506 573 aaPredicted RBP5.73□□□□□ -1.49
PTPRD-202ENST00000356435 FNTAP49354 379 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 CRELD2Q6UXH1 353 aaPredicted RBP5.73□□□□□ -1.49
PTPRD-202ENST00000356435 ZNF614Q8N883 585 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 RBM15Q96T37 977 aaKnown RBP eCLIP5.73□□□□□ -1.49
PTPRD-202ENST00000356435 MXRA8Q9BRK3 442 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 PLA2G12BQ9BX93 195 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 OSGEPL1Q9H4B0 414 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 GALNT8Q9NY28 637 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 A0A087WZ62 844 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 GRAP2O75791 330 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 AP1G2O75843 785 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 RHOCP08134 193 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 PGM1P36871 562 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 CYP51A1Q16850 503 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 CDC42EP5Q6NZY7 148 aa5.73□□□□□ -1.49
PTPRD-202ENST00000356435 SGMS1Q86VZ5 419 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms