RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 TRIP13Q15645 432 aaPredicted RBP16.4■□□□□ 0.22
RTN3-205ENST00000356000 LMBRD2Q68DH5 695 aaPredicted RBP16.4■□□□□ 0.22
RTN3-205ENST00000356000 CYP2U1Q7Z449 544 aa16.4■□□□□ 0.22
RTN3-205ENST00000356000 PRPF39Q86UA1 669 aaKnown RBP16.4■□□□□ 0.22
RTN3-205ENST00000356000 KBTBD6Q86V97 674 aa16.4■□□□□ 0.22
RTN3-205ENST00000356000 SIX5Q8N196 739 aa16.4■□□□□ 0.22
RTN3-205ENST00000356000 NLGN2Q8NFZ4 835 aa16.4■□□□□ 0.22
RTN3-205ENST00000356000 TCP10LQ8TDR4 215 aa16.4■□□□□ 0.22
RTN3-205ENST00000356000 MORC4Q8TE76 937 aa16.4■□□□□ 0.22
RTN3-205ENST00000356000 PIGBQ92521 554 aa16.4■□□□□ 0.22
RTN3-205ENST00000356000 NLRP4Q96MN2 994 aa16.4■□□□□ 0.22
RTN3-205ENST00000356000 PPCSQ9HAB8 311 aa16.4■□□□□ 0.22
RTN3-205ENST00000356000 GPRC5DQ9NZD1 345 aa16.4■□□□□ 0.22
RTN3-205ENST00000356000 ERGIC3Q9Y282 383 aa16.4■□□□□ 0.22
RTN3-205ENST00000356000 TLL2Q9Y6L7 1015 aa16.4■□□□□ 0.22
RTN3-205ENST00000356000 A0A1B0GTW7 788 aa16.4■□□□□ 0.22
RTN3-205ENST00000356000 FSCN2O14926 492 aa16.4■□□□□ 0.22
RTN3-205ENST00000356000 GNPATO15228 680 aa16.4■□□□□ 0.22
RTN3-205ENST00000356000 DLATP10515 647 aaKnown RBP16.4■□□□□ 0.22
RTN3-205ENST00000356000 PLS3P13797 630 aa16.4■□□□□ 0.22
RTN3-205ENST00000356000 RRM1P23921 792 aa16.4■□□□□ 0.22
RTN3-205ENST00000356000 HOXD10P28358 340 aa16.4■□□□□ 0.22
RTN3-205ENST00000356000 TUFMP49411 452 aaKnown RBP16.4■□□□□ 0.22
RTN3-205ENST00000356000 TUBA1BP68363 451 aa16.4■□□□□ 0.22
RTN3-205ENST00000356000 WASHC5Q12768 1159 aa16.4■□□□□ 0.22
RTN3-205ENST00000356000 HSF5Q4G112 596 aaPredicted RBP16.4■□□□□ 0.22
RTN3-205ENST00000356000 SGO2Q562F6 1265 aa16.4■□□□□ 0.22
RTN3-205ENST00000356000 SIGIRRQ6IA17 410 aa16.4■□□□□ 0.22
RTN3-205ENST00000356000 TTC23LQ6PF05 361 aa16.4■□□□□ 0.22
RTN3-205ENST00000356000 TUBA1AQ71U36 451 aa16.4■□□□□ 0.22
RTN3-205ENST00000356000 CHSY1Q86X52 802 aa16.4■□□□□ 0.22
RTN3-205ENST00000356000 TICAM1Q8IUC6 712 aa16.4■□□□□ 0.22
RTN3-205ENST00000356000 MMAAQ8IVH4 418 aaKnown RBP16.4■□□□□ 0.22
RTN3-205ENST00000356000 PQLC1Q8N2U9 271 aa16.4■□□□□ 0.22
RTN3-205ENST00000356000 MAGEB6Q8N7X4 407 aa16.4■□□□□ 0.22
RTN3-205ENST00000356000 BBOF1Q8ND07 529 aa16.4■□□□□ 0.22
RTN3-205ENST00000356000 PSPC1Q8WXF1 523 aaKnown RBP16.4■□□□□ 0.22
RTN3-205ENST00000356000 THAP11Q96EK4 314 aa16.4■□□□□ 0.22
RTN3-205ENST00000356000 PSD2Q9BQI7 771 aa16.4■□□□□ 0.22
RTN3-205ENST00000356000 SF3B1O75533 1304 aaKnown RBP eCLIP16.4■□□□□ 0.226e-9■■■■■ 64.2
RTN3-205ENST00000356000 UGT1A9O60656 530 aa16.39■□□□□ 0.21
RTN3-205ENST00000356000 TRPA1O75762 1119 aa16.39■□□□□ 0.21
RTN3-205ENST00000356000 CHEK2O96017 543 aa16.39■□□□□ 0.21
RTN3-205ENST00000356000 S100BP04271 92 aaPredicted RBP16.39■□□□□ 0.21
RTN3-205ENST00000356000 C8BP07358 591 aa16.39■□□□□ 0.21
RTN3-205ENST00000356000 UGT1A6P19224 532 aa16.39■□□□□ 0.21
RTN3-205ENST00000356000 UGT1A1P22309 533 aa16.39■□□□□ 0.21
RTN3-205ENST00000356000 UGT1A4P22310 534 aa16.39■□□□□ 0.21
RTN3-205ENST00000356000 MAN1A1P33908 653 aa16.39■□□□□ 0.21
RTN3-205ENST00000356000 UGT1A3P35503 534 aa16.39■□□□□ 0.21
RTN3-205ENST00000356000 UGT1A5P35504 534 aa16.39■□□□□ 0.21
RTN3-205ENST00000356000 YWHAGP61981 247 aaKnown RBP eCLIP16.39■□□□□ 0.21
RTN3-205ENST00000356000 SF3B3Q15393 1217 aaKnown RBP16.39■□□□□ 0.21
RTN3-205ENST00000356000 FAM26FQ5R3K3 315 aa16.39■□□□□ 0.21
RTN3-205ENST00000356000 DAGLBQ8NCG7 672 aa16.39■□□□□ 0.21
RTN3-205ENST00000356000 HSPH1Q92598 858 aa16.39■□□□□ 0.21
RTN3-205ENST00000356000 ISOC1Q96CN7 298 aa16.39■□□□□ 0.21
RTN3-205ENST00000356000 NUDT12Q9BQG2 462 aa16.39■□□□□ 0.21
RTN3-205ENST00000356000 FOXP3Q9BZS1 431 aa16.39■□□□□ 0.21
RTN3-205ENST00000356000 KCTD10Q9H3F6 313 aa16.39■□□□□ 0.21
RTN3-205ENST00000356000 SMYD3Q9H7B4 428 aa16.39■□□□□ 0.21
RTN3-205ENST00000356000 UGT1A7Q9HAW7 530 aa16.39■□□□□ 0.21
RTN3-205ENST00000356000 UGT1A10Q9HAW8 530 aa16.39■□□□□ 0.21
RTN3-205ENST00000356000 UGT1A8Q9HAW9 530 aa16.39■□□□□ 0.21
RTN3-205ENST00000356000 TAS2R14Q9NYV8 317 aa16.39■□□□□ 0.21
RTN3-205ENST00000356000 EBF1Q9UH73 591 aa16.39■□□□□ 0.21
RTN3-205ENST00000356000 SLC24A2Q9UI40 661 aa16.39■□□□□ 0.21
RTN3-205ENST00000356000 PSMD13Q9UNM6 376 aa16.39■□□□□ 0.21
RTN3-205ENST00000356000 GNEQ9Y223 722 aaKnown RBP16.39■□□□□ 0.21
RTN3-205ENST00000356000 B3GNT3Q9Y2A9 372 aa16.39■□□□□ 0.21
RTN3-205ENST00000356000 KIAA1551Q9HCM1 1747 aa16.39■□□□□ 0.21
RTN3-205ENST00000356000 DLEC1Q9Y238 1755 aa16.39■□□□□ 0.21
RTN3-205ENST00000356000 TEX28O15482 410 aa16.39■□□□□ 0.21
RTN3-205ENST00000356000 LDHCP07864 332 aa16.39■□□□□ 0.21
RTN3-205ENST00000356000 GYS1P13807 737 aa16.39■□□□□ 0.21
RTN3-205ENST00000356000 HSPA13P48723 471 aa16.39■□□□□ 0.21
RTN3-205ENST00000356000 MTMR2Q13614 643 aa16.39■□□□□ 0.21
RTN3-205ENST00000356000 SPCS2Q15005 226 aa16.39■□□□□ 0.21
RTN3-205ENST00000356000 SHROOM1Q2M3G4 852 aaPredicted RBP16.39■□□□□ 0.21
RTN3-205ENST00000356000 GJB7Q6PEY0 223 aa16.39■□□□□ 0.21
RTN3-205ENST00000356000 FRMD5Q7Z6J6 570 aa16.39■□□□□ 0.21
RTN3-205ENST00000356000 TMEM126BQ8IUX1 230 aa16.39■□□□□ 0.21
RTN3-205ENST00000356000 GRK7Q8WTQ7 553 aa16.39■□□□□ 0.21
RTN3-205ENST00000356000 RAD54LQ92698 747 aa16.39■□□□□ 0.21
RTN3-205ENST00000356000 SLC39A3Q9BRY0 314 aa16.39■□□□□ 0.21
RTN3-205ENST00000356000 CDH19Q9H159 772 aa16.39■□□□□ 0.21
RTN3-205ENST00000356000 HIPK3Q9H422 1215 aa16.39■□□□□ 0.21
RTN3-205ENST00000356000 SLC17A7Q9P2U7 560 aa16.39■□□□□ 0.21
RTN3-205ENST00000356000 PSMD12O00232 456 aaPredicted RBP16.38■□□□□ 0.21
RTN3-205ENST00000356000 SPOPO43791 374 aa16.38■□□□□ 0.21
RTN3-205ENST00000356000 CLASP2O75122 1294 aaKnown RBP16.38■□□□□ 0.21
RTN3-205ENST00000356000 SOX5P35711 763 aa16.38■□□□□ 0.21
RTN3-205ENST00000356000 CSE1LP55060 971 aaKnown RBP16.38■□□□□ 0.21
RTN3-205ENST00000356000 LCORLQ8N3X6 602 aa16.38■□□□□ 0.21
RTN3-205ENST00000356000 ATP6V0D2Q8N8Y2 350 aa16.38■□□□□ 0.21
RTN3-205ENST00000356000 CATSPER1Q8NEC5 780 aa16.38■□□□□ 0.21
RTN3-205ENST00000356000 LILRB4Q8NHJ6 448 aa16.38■□□□□ 0.21
RTN3-205ENST00000356000 HELQQ8TDG4 1101 aa16.38■□□□□ 0.21
RTN3-205ENST00000356000 TAMM41Q96BW9 452 aa16.38■□□□□ 0.21
RTN3-205ENST00000356000 C12orf43Q96C57 262 aaKnown RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms