RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 LRGUKQ96M69 825 aa10.12□□□□□ -0.79
GABPA-201ENST00000354828 OGFRQ9NZT2 677 aa10.12□□□□□ -0.79
GABPA-201ENST00000354828 PADI3Q9ULW8 664 aa10.12□□□□□ -0.79
GABPA-201ENST00000354828 CCDC151A5D8V7 595 aa10.12□□□□□ -0.79
GABPA-201ENST00000354828 UNCXA6NJT0 531 aa10.12□□□□□ -0.79
GABPA-201ENST00000354828 GRIK3Q13003 919 aa10.12□□□□□ -0.79
GABPA-201ENST00000354828 INPP4AQ96PE3 977 aaPredicted RBP10.12□□□□□ -0.79
GABPA-201ENST00000354828 FAM118BQ9BPY3 351 aa10.12□□□□□ -0.79
GABPA-201ENST00000354828 DCLK3Q9C098 648 aa10.12□□□□□ -0.79
GABPA-201ENST00000354828 ZNF518BQ9C0D4 1074 aa10.12□□□□□ -0.79
GABPA-201ENST00000354828 SEMA6BQ9H3T3 888 aa10.12□□□□□ -0.79
GABPA-201ENST00000354828 ARHGEF38Q9NXL2 777 aa10.12□□□□□ -0.79
GABPA-201ENST00000354828 PHRF1Q9P1Y6 1649 aaKnown RBP10.11□□□□□ -0.79
GABPA-201ENST00000354828 ANKRD63C9JTQ0 380 aa10.11□□□□□ -0.79
GABPA-201ENST00000354828 GFAPP14136 432 aa10.11□□□□□ -0.79
GABPA-201ENST00000354828 CSE1LP55060 971 aaKnown RBP10.11□□□□□ -0.79
GABPA-201ENST00000354828 HTRA3P83110 453 aa10.11□□□□□ -0.79
GABPA-201ENST00000354828 IL1RL1Q01638 556 aa10.11□□□□□ -0.79
GABPA-201ENST00000354828 RD3Q7Z3Z2 195 aa10.11□□□□□ -0.79
GABPA-201ENST00000354828 ELMO3Q96BJ8 720 aa10.11□□□□□ -0.79
GABPA-201ENST00000354828 KCNMB3Q9NPA1 279 aa10.11□□□□□ -0.79
GABPA-201ENST00000354828 GPATCH2LQ9NWQ4 482 aa10.11□□□□□ -0.79
GABPA-201ENST00000354828 NUDT5Q9UKK9 219 aa10.11□□□□□ -0.79
GABPA-201ENST00000354828 GTF3C4Q9UKN8 822 aa10.11□□□□□ -0.79
GABPA-201ENST00000354828 SMIM24O75264 130 aa10.11□□□□□ -0.79
GABPA-201ENST00000354828 TMEM253P0C7T8 217 aa10.11□□□□□ -0.79
GABPA-201ENST00000354828 NCF2P19878 526 aaPredicted RBP10.11□□□□□ -0.79
GABPA-201ENST00000354828 ACLYP53396 1101 aa10.11□□□□□ -0.79
GABPA-201ENST00000354828 PTENP60484 403 aa10.11□□□□□ -0.79
GABPA-201ENST00000354828 RBBP7Q16576 425 aa10.11□□□□□ -0.79
GABPA-201ENST00000354828 HIF1AQ16665 826 aa10.11□□□□□ -0.79
GABPA-201ENST00000354828 ATAT1Q5SQI0 421 aa10.11□□□□□ -0.79
GABPA-201ENST00000354828 ATG16L1Q676U5 607 aa10.11□□□□□ -0.79
GABPA-201ENST00000354828 DCLRE1AQ6PJP8 1040 aa10.11□□□□□ -0.79
GABPA-201ENST00000354828 FBXL16Q8N461 479 aa10.11□□□□□ -0.79
GABPA-201ENST00000354828 ZNF507Q8TCN5 953 aa10.11□□□□□ -0.79
GABPA-201ENST00000354828 SERPINB11Q96P15 392 aa10.11□□□□□ -0.79
GABPA-201ENST00000354828 SCAMP3O14828 347 aaKnown RBP10.11□□□□□ -0.79
GABPA-201ENST00000354828 SETD1AO15047 1707 aaKnown RBP10.11□□□□□ -0.79
GABPA-201ENST00000354828 ANXA9O76027 345 aa10.11□□□□□ -0.79
GABPA-201ENST00000354828 MNAT1P51948 309 aa10.11□□□□□ -0.79
GABPA-201ENST00000354828 TMPRSS15P98073 1019 aa10.11□□□□□ -0.79
GABPA-201ENST00000354828 TMEM119Q4V9L6 283 aa10.11□□□□□ -0.79
GABPA-201ENST00000354828 DENND5BQ6ZUT9 1274 aa10.11□□□□□ -0.79
GABPA-201ENST00000354828 DSG4Q86SJ6 1040 aa10.11□□□□□ -0.79
GABPA-201ENST00000354828 CASS4Q9NQ75 786 aa10.11□□□□□ -0.79
GABPA-201ENST00000354828 CREBZFQ9NS37 354 aa10.11□□□□□ -0.79
GABPA-201ENST00000354828 TRMT13Q9NUP7 481 aaKnown RBP10.11□□□□□ -0.79
GABPA-201ENST00000354828 RNF186Q9NXI6 227 aa10.11□□□□□ -0.79
GABPA-201ENST00000354828 SLC27A5Q9Y2P5 690 aa10.11□□□□□ -0.79
GABPA-201ENST00000354828 PTCH2Q9Y6C5 1203 aa10.11□□□□□ -0.79
GABPA-201ENST00000354828 LOC102724159A0A0B4J2E5 919 aa10.11□□□□□ -0.79
GABPA-201ENST00000354828 TTC4O95801 387 aa10.11□□□□□ -0.79
GABPA-201ENST00000354828 ATP5BP06576 529 aaKnown RBP10.11□□□□□ -0.79
GABPA-201ENST00000354828 CCDC130P13994 396 aa10.11□□□□□ -0.79
GABPA-201ENST00000354828 OR1D2P34982 312 aa10.11□□□□□ -0.79
GABPA-201ENST00000354828 ATP5C1P36542 298 aaKnown RBP10.11□□□□□ -0.79
GABPA-201ENST00000354828 GLUD2P49448 558 aa10.11□□□□□ -0.79
GABPA-201ENST00000354828 GEMIN4P57678 1058 aaKnown RBP10.11□□□□□ -0.79
GABPA-201ENST00000354828 PWP2Q15269 919 aaKnown RBP10.11□□□□□ -0.79
GABPA-201ENST00000354828 NAPEPLDQ6IQ20 393 aa10.11□□□□□ -0.79
GABPA-201ENST00000354828 TFAP2DQ7Z6R9 452 aa10.11□□□□□ -0.79
GABPA-201ENST00000354828 CACNA2D3Q8IZS8 1091 aa10.11□□□□□ -0.79
GABPA-201ENST00000354828 EMC1Q8N766 993 aa10.11□□□□□ -0.79
GABPA-201ENST00000354828 TFB1MQ8WVM0 346 aaKnown RBP10.11□□□□□ -0.79
GABPA-201ENST00000354828 SDCCAG3Q96C92 435 aa10.11□□□□□ -0.79
GABPA-201ENST00000354828 PAWRQ96IZ0 340 aaKnown RBP10.11□□□□□ -0.79
GABPA-201ENST00000354828 CDT1Q9H211 546 aa10.11□□□□□ -0.79
GABPA-201ENST00000354828 RWDD3Q9Y3V2 267 aa10.11□□□□□ -0.79
GABPA-201ENST00000354828 C2orf81A6NN90 581 aa10.1□□□□□ -0.79
GABPA-201ENST00000354828 ALDH1A2O94788 518 aa10.1□□□□□ -0.79
GABPA-201ENST00000354828 MAP3K6O95382 1288 aa10.1□□□□□ -0.79
GABPA-201ENST00000354828 CSH1P0DML2 217 aa10.1□□□□□ -0.79
GABPA-201ENST00000354828 CSH2P0DML3 217 aa10.1□□□□□ -0.79
GABPA-201ENST00000354828 VCLP18206 1134 aa10.1□□□□□ -0.79
GABPA-201ENST00000354828 CHRM3P20309 590 aa10.1□□□□□ -0.79
GABPA-201ENST00000354828 CYP2C18P33260 490 aa10.1□□□□□ -0.79
GABPA-201ENST00000354828 RGS4P49798 205 aa10.1□□□□□ -0.79
GABPA-201ENST00000354828 RTP1P59025 263 aa10.1□□□□□ -0.79
GABPA-201ENST00000354828 KCNT1Q5JUK3 1230 aa10.1□□□□□ -0.79
GABPA-201ENST00000354828 LGI2Q8N0V4 545 aa10.1□□□□□ -0.79
GABPA-201ENST00000354828 ZNF296Q8WUU4 475 aaPredicted RBP10.1□□□□□ -0.79
GABPA-201ENST00000354828 RXFP2Q8WXD0 754 aa10.1□□□□□ -0.79
GABPA-201ENST00000354828 SCLYQ96I15 445 aa10.1□□□□□ -0.79
GABPA-201ENST00000354828 COG4Q9H9E3 785 aa10.1□□□□□ -0.79
GABPA-201ENST00000354828 SENP1Q9P0U3 644 aa10.1□□□□□ -0.79
GABPA-201ENST00000354828 FBXO10Q9UK96 956 aa10.1□□□□□ -0.79
GABPA-201ENST00000354828 ANP32DO95626 131 aa10.1□□□□□ -0.79
GABPA-201ENST00000354828 CLTBP09497 229 aa10.1□□□□□ -0.79
GABPA-201ENST00000354828 PTPN1P18031 435 aaKnown RBP10.1□□□□□ -0.79
GABPA-201ENST00000354828 POLR2EP19388 210 aaKnown RBP10.1□□□□□ -0.79
GABPA-201ENST00000354828 FXR1P51114 621 aaKnown RBP eCLIP10.1□□□□□ -0.79
GABPA-201ENST00000354828 YWHAZP63104 245 aaKnown RBP10.1□□□□□ -0.79
GABPA-201ENST00000354828 BYSLQ13895 437 aaKnown RBP10.1□□□□□ -0.79
GABPA-201ENST00000354828 MTF1Q14872 753 aa10.1□□□□□ -0.79
GABPA-201ENST00000354828 COBLL1Q53SF7 1204 aa10.1□□□□□ -0.79
GABPA-201ENST00000354828 MAP3K21Q5TCX8 1036 aa10.1□□□□□ -0.79
GABPA-201ENST00000354828 PSRC1Q6PGN9 363 aaPredicted RBP10.1□□□□□ -0.79
GABPA-201ENST00000354828 ANKMY2Q8IV38 441 aa10.1□□□□□ -0.79
GABPA-201ENST00000354828 TTPALQ9BTX7 342 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms