RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 E2F2Q14209 437 aa11.33□□□□□ -0.6
SND1-201ENST00000354725 PCSK7Q16549 785 aa11.33□□□□□ -0.6
SND1-201ENST00000354725 RINT1Q6NUQ1 792 aa11.33□□□□□ -0.6
SND1-201ENST00000354725 GJB7Q6PEY0 223 aa11.33□□□□□ -0.6
SND1-201ENST00000354725 C16orf54Q6UWD8 224 aa11.33□□□□□ -0.6
SND1-201ENST00000354725 KCTD1Q719H9 257 aa11.33□□□□□ -0.6
SND1-201ENST00000354725 ASRGL1Q7L266 308 aa11.33□□□□□ -0.6
SND1-201ENST00000354725 PEX26Q7Z412 305 aa11.33□□□□□ -0.6
SND1-201ENST00000354725 IFNL1Q8IU54 200 aa11.33□□□□□ -0.6
SND1-201ENST00000354725 ZDHHC14Q8IZN3 488 aa11.33□□□□□ -0.6
SND1-201ENST00000354725 TRIML2Q8N7C3 387 aa11.33□□□□□ -0.6
SND1-201ENST00000354725 SLC35G2Q8TBE7 412 aa11.33□□□□□ -0.6
SND1-201ENST00000354725 OTUD5Q96G74 571 aa11.33□□□□□ -0.6
SND1-201ENST00000354725 FAM129AQ9BZQ8 928 aa11.33□□□□□ -0.6
SND1-201ENST00000354725 SIGLEC16A6NMB1 481 aa11.33□□□□□ -0.6
SND1-201ENST00000354725 BTBD19C9JJ37 291 aa11.33□□□□□ -0.6
SND1-201ENST00000354725 PIP5K1CO60331 668 aa11.33□□□□□ -0.6
SND1-201ENST00000354725 PDE5AO76074 875 aa11.33□□□□□ -0.6
SND1-201ENST00000354725 TNFAIP3P21580 790 aa11.33□□□□□ -0.6
SND1-201ENST00000354725 RTP1P59025 263 aa11.33□□□□□ -0.6
SND1-201ENST00000354725 NOGQ13253 232 aa11.33□□□□□ -0.6
SND1-201ENST00000354725 CLUL1Q15846 466 aa11.33□□□□□ -0.6
SND1-201ENST00000354725 TRIM67Q6ZTA4 783 aa11.33□□□□□ -0.6
SND1-201ENST00000354725 FAM20CQ8IXL6 584 aa11.33□□□□□ -0.6
SND1-201ENST00000354725 ENDOVQ8N8Q3 282 aaKnown RBP11.33□□□□□ -0.6
SND1-201ENST00000354725 FAM161BQ96MY7 647 aa11.33□□□□□ -0.6
SND1-201ENST00000354725 ERP44Q9BS26 406 aa11.33□□□□□ -0.6
SND1-201ENST00000354725 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.33□□□□□ -0.61e-6■■■□□ 17.2
SND1-201ENST00000354725 EML1O00423 815 aa11.32□□□□□ -0.6
SND1-201ENST00000354725 CYP2C9P11712 490 aa11.32□□□□□ -0.6
SND1-201ENST00000354725 MAN1A1P33908 653 aa11.32□□□□□ -0.6
SND1-201ENST00000354725 MXI1P50539 228 aa11.32□□□□□ -0.6
SND1-201ENST00000354725 AP2B1P63010 937 aa11.32□□□□□ -0.6
SND1-201ENST00000354725 RELAQ04206 551 aa11.32□□□□□ -0.6
SND1-201ENST00000354725 SIX1Q15475 284 aaPredicted RBP11.32□□□□□ -0.6
SND1-201ENST00000354725 LRRC8BQ6P9F7 803 aa11.32□□□□□ -0.6
SND1-201ENST00000354725 SKA1Q96BD8 255 aa11.32□□□□□ -0.6
SND1-201ENST00000354725 CELF4Q9BZC1 486 aaKnown RBP11.32□□□□□ -0.6
SND1-201ENST00000354725 PABPC3Q9H361 631 aaKnown RBP11.32□□□□□ -0.6
SND1-201ENST00000354725 KRT82Q9NSB4 513 aa11.32□□□□□ -0.6
SND1-201ENST00000354725 NMRK1Q9NWW6 199 aa11.32□□□□□ -0.6
SND1-201ENST00000354725 DNM3Q9UQ16 869 aa11.32□□□□□ -0.6
SND1-201ENST00000354725 GIT1Q9Y2X7 761 aa11.32□□□□□ -0.6
SND1-201ENST00000354725 PCDHB2Q9Y5E7 798 aa11.32□□□□□ -0.6
SND1-201ENST00000354725 PCDHA1Q9Y5I3 950 aa11.32□□□□□ -0.6
SND1-201ENST00000354725 GOLGA8IPA6NC78 632 aa11.32□□□□□ -0.6
SND1-201ENST00000354725 MANSC4A6NHS7 340 aaPredicted RBP11.32□□□□□ -0.6
SND1-201ENST00000354725 TNFRSF10AO00220 468 aa11.32□□□□□ -0.6
SND1-201ENST00000354725 PLA2G6O60733 806 aa11.32□□□□□ -0.6
SND1-201ENST00000354725 ALAS2P22557 587 aa11.32□□□□□ -0.6
SND1-201ENST00000354725 STAT1P42224 750 aa11.32□□□□□ -0.6
SND1-201ENST00000354725 FMO5P49326 533 aa11.32□□□□□ -0.6
SND1-201ENST00000354725 CAP1Q01518 475 aa11.32□□□□□ -0.6
SND1-201ENST00000354725 SNAPC2Q13487 334 aa11.32□□□□□ -0.6
SND1-201ENST00000354725 MTMR2Q13614 643 aa11.32□□□□□ -0.6
SND1-201ENST00000354725 SPIDRQ14159 915 aa11.32□□□□□ -0.6
SND1-201ENST00000354725 SUZ12Q15022 739 aaKnown RBP11.32□□□□□ -0.6
SND1-201ENST00000354725 C12orf50Q8NA57 414 aaPredicted RBP11.32□□□□□ -0.6
SND1-201ENST00000354725 SLAIN1Q8ND83 568 aa11.32□□□□□ -0.6
SND1-201ENST00000354725 FNDC8Q8TC99 324 aa11.32□□□□□ -0.6
SND1-201ENST00000354725 ALG3Q92685 438 aa11.32□□□□□ -0.6
SND1-201ENST00000354725 SLCO2A1Q92959 643 aa11.32□□□□□ -0.6
SND1-201ENST00000354725 ARHGEF26Q96DR7 871 aa11.32□□□□□ -0.6
SND1-201ENST00000354725 ALPK1Q96QP1 1244 aa11.32□□□□□ -0.6
SND1-201ENST00000354725 TUFT1Q9NNX1 390 aa11.32□□□□□ -0.6
SND1-201ENST00000354725 WBP1LQ9NX94 342 aa11.32□□□□□ -0.6
SND1-201ENST00000354725 VTI1BQ9UEU0 232 aa11.32□□□□□ -0.6
SND1-201ENST00000354725 RIMKLBQ9ULI2 386 aa11.32□□□□□ -0.6
SND1-201ENST00000354725 FBP2O00757 339 aa11.32□□□□□ -0.6
SND1-201ENST00000354725 CNMDO75829 334 aa11.32□□□□□ -0.6
SND1-201ENST00000354725 PSMD10O75832 226 aa11.32□□□□□ -0.6
SND1-201ENST00000354725 RXRGP48443 463 aa11.32□□□□□ -0.6
SND1-201ENST00000354725 ACADVLP49748 655 aa11.32□□□□□ -0.6
SND1-201ENST00000354725 SEPHS1P49903 392 aa11.32□□□□□ -0.6
SND1-201ENST00000354725 RNASE9P60153 205 aaKnown RBP11.32□□□□□ -0.6
SND1-201ENST00000354725 LMNB2Q03252 620 aa11.32□□□□□ -0.6
SND1-201ENST00000354725 POU5F1BQ06416 359 aa11.32□□□□□ -0.6
SND1-201ENST00000354725 SF3A3Q12874 501 aaKnown RBP eCLIP11.32□□□□□ -0.63e-7■■■■□ 24
SND1-201ENST00000354725 CTTNQ14247 550 aaKnown RBP11.32□□□□□ -0.6
SND1-201ENST00000354725 KPNB1Q14974 876 aaKnown RBP11.32□□□□□ -0.6
SND1-201ENST00000354725 CBWD6Q4V339 395 aa11.32□□□□□ -0.6
SND1-201ENST00000354725 IGSF11Q5DX21 431 aa11.32□□□□□ -0.6
SND1-201ENST00000354725 CBWD3Q5JTY5 395 aa11.32□□□□□ -0.6
SND1-201ENST00000354725 CBWD5Q5RIA9 395 aa11.32□□□□□ -0.6
SND1-201ENST00000354725 SPERTQ8NA61 448 aa11.32□□□□□ -0.6
SND1-201ENST00000354725 GALNT6Q8NCL4 622 aa11.32□□□□□ -0.6
SND1-201ENST00000354725 REPS2Q8NFH8 660 aa11.32□□□□□ -0.6
SND1-201ENST00000354725 PIGOQ8TEQ8 1089 aa11.32□□□□□ -0.6
SND1-201ENST00000354725 DNAJC1Q96KC8 554 aaKnown RBP11.32□□□□□ -0.6
SND1-201ENST00000354725 OLFM3Q96PB7 478 aa11.32□□□□□ -0.6
SND1-201ENST00000354725 HGH1Q9BTY7 390 aa11.32□□□□□ -0.6
SND1-201ENST00000354725 DDX23Q9BUQ8 820 aaKnown RBP11.32□□□□□ -0.6
SND1-201ENST00000354725 CEP44Q9C0F1 390 aa11.32□□□□□ -0.6
SND1-201ENST00000354725 SAGE1Q9NXZ1 904 aa11.32□□□□□ -0.6
SND1-201ENST00000354725 KCND2Q9NZV8 630 aa11.32□□□□□ -0.6
SND1-201ENST00000354725 ACAD8Q9UKU7 415 aa11.32□□□□□ -0.6
SND1-201ENST00000354725 AGTPBP1Q9UPW5 1226 aa11.32□□□□□ -0.6
SND1-201ENST00000354725 GPC6Q9Y625 555 aaPredicted RBP11.32□□□□□ -0.6
SND1-201ENST00000354725 MATN2O00339 956 aa11.31□□□□□ -0.6
SND1-201ENST00000354725 ATG7O95352 703 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms