RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 PXMP2Q9NR77 195 aa11.94□□□□□ -0.5
CAPN9-202ENST00000354537 GABBR1Q9UBS5 961 aa11.94□□□□□ -0.5
CAPN9-202ENST00000354537 TAGLN3Q9UI15 199 aa11.94□□□□□ -0.5
CAPN9-202ENST00000354537 AGTPBP1Q9UPW5 1226 aa11.94□□□□□ -0.5
CAPN9-202ENST00000354537 SCN9AQ15858 1988 aa11.94□□□□□ -0.5
CAPN9-202ENST00000354537 SPDYE2BA6NHP3 402 aa11.93□□□□□ -0.5
CAPN9-202ENST00000354537 GOLGA8SH3BPF8 625 aa11.93□□□□□ -0.5
CAPN9-202ENST00000354537 GOLGA8MH3BSY2 632 aa11.93□□□□□ -0.5
CAPN9-202ENST00000354537 I3L4J1 428 aa11.93□□□□□ -0.5
CAPN9-202ENST00000354537 TRDMT1O14717 391 aaKnown RBP11.93□□□□□ -0.5
CAPN9-202ENST00000354537 ZNF862O60290 1169 aa11.93□□□□□ -0.5
CAPN9-202ENST00000354537 SPDYE6P0CI01 402 aa11.93□□□□□ -0.5
CAPN9-202ENST00000354537 EIF2AK2P19525 551 aaKnown RBP11.93□□□□□ -0.5
CAPN9-202ENST00000354537 KDELR1P24390 212 aa11.93□□□□□ -0.5
CAPN9-202ENST00000354537 CRABP2P29373 138 aa11.93□□□□□ -0.5
CAPN9-202ENST00000354537 ACTR3P61158 418 aa11.93□□□□□ -0.5
CAPN9-202ENST00000354537 RPL26P61254 145 aaKnown RBP11.93□□□□□ -0.5
CAPN9-202ENST00000354537 AP2B1P63010 937 aa11.93□□□□□ -0.5
CAPN9-202ENST00000354537 THOC5Q13769 683 aaKnown RBP11.93□□□□□ -0.5
CAPN9-202ENST00000354537 DPYSL3Q14195 570 aa11.93□□□□□ -0.5
CAPN9-202ENST00000354537 ACAP1Q15027 740 aa11.93□□□□□ -0.5
CAPN9-202ENST00000354537 BBS9Q3SYG4 887 aa11.93□□□□□ -0.5
CAPN9-202ENST00000354537 STYK1Q6J9G0 422 aa11.93□□□□□ -0.5
CAPN9-202ENST00000354537 SLC26A11Q86WA9 606 aa11.93□□□□□ -0.5
CAPN9-202ENST00000354537 SERAC1Q96JX3 654 aa11.93□□□□□ -0.5
CAPN9-202ENST00000354537 TRIM4Q9C037 500 aa11.93□□□□□ -0.5
CAPN9-202ENST00000354537 POLR3FQ9H1D9 316 aaPredicted RBP11.93□□□□□ -0.5
CAPN9-202ENST00000354537 CYP26B1Q9NR63 512 aa11.93□□□□□ -0.5
CAPN9-202ENST00000354537 USP21Q9UK80 565 aa11.93□□□□□ -0.5
CAPN9-202ENST00000354537 PLA2G4CQ9UP65 541 aa11.93□□□□□ -0.5
CAPN9-202ENST00000354537 TEX264Q9Y6I9 313 aa11.93□□□□□ -0.5
CAPN9-202ENST00000354537 PTPRJQ12913 1337 aa11.93□□□□□ -0.5
CAPN9-202ENST00000354537 CNTNAP2Q9UHC6 1331 aa11.93□□□□□ -0.5
CAPN9-202ENST00000354537 A0A0B4J269 797 aa11.93□□□□□ -0.5
CAPN9-202ENST00000354537 B2RBV5 119 aa11.93□□□□□ -0.5
CAPN9-202ENST00000354537 SPECC1L-ADORA2AF8WAN1 911 aa11.93□□□□□ -0.5
CAPN9-202ENST00000354537 APOC4-APOC2K7ER74 178 aa11.93□□□□□ -0.5
CAPN9-202ENST00000354537 COPEO14579 308 aa11.93□□□□□ -0.5
CAPN9-202ENST00000354537 CHADO15335 359 aa11.93□□□□□ -0.5
CAPN9-202ENST00000354537 CST8O60676 142 aa11.93□□□□□ -0.5
CAPN9-202ENST00000354537 BANF1O75531 89 aa11.93□□□□□ -0.5
CAPN9-202ENST00000354537 ASS1P00966 412 aaKnown RBP11.93□□□□□ -0.5
CAPN9-202ENST00000354537 APOC2P02655 101 aa11.93□□□□□ -0.5
CAPN9-202ENST00000354537 ASNSP08243 561 aa11.93□□□□□ -0.5
CAPN9-202ENST00000354537 BGNP21810 368 aa11.93□□□□□ -0.5
CAPN9-202ENST00000354537 CCNFP41002 786 aa11.93□□□□□ -0.5
CAPN9-202ENST00000354537 BIRC2Q13490 618 aa11.93□□□□□ -0.5
CAPN9-202ENST00000354537 NCOA4Q13772 614 aa11.93□□□□□ -0.5
CAPN9-202ENST00000354537 PDCD2Q16342 344 aaPredicted RBP11.93□□□□□ -0.5
CAPN9-202ENST00000354537 SPDYE2Q495Y8 402 aa11.93□□□□□ -0.5
CAPN9-202ENST00000354537 RNF220Q5VTB9 566 aa11.93□□□□□ -0.5
CAPN9-202ENST00000354537 ANGEL2Q5VTE6 544 aaKnown RBP11.93□□□□□ -0.5
CAPN9-202ENST00000354537 TXNRD3NBQ6F5E7 133 aa11.93□□□□□ -0.5
CAPN9-202ENST00000354537 SCUBE1Q8IWY4 988 aa11.93□□□□□ -0.5
CAPN9-202ENST00000354537 NCSTNQ92542 709 aa11.93□□□□□ -0.5
CAPN9-202ENST00000354537 DTNBP1Q96EV8 351 aa11.93□□□□□ -0.5
CAPN9-202ENST00000354537 GBP5Q96PP8 586 aa11.93□□□□□ -0.5
CAPN9-202ENST00000354537 FAM111AQ96PZ2 611 aa11.93□□□□□ -0.5
CAPN9-202ENST00000354537 ASCC2Q9H1I8 757 aaPredicted RBP11.93□□□□□ -0.5
CAPN9-202ENST00000354537 FBXO6Q9NRD1 293 aaPredicted RBP11.93□□□□□ -0.5
CAPN9-202ENST00000354537 ZDHHC7Q9NXF8 308 aa11.93□□□□□ -0.5
CAPN9-202ENST00000354537 ZNF70Q9UC06 446 aaPredicted RBP11.93□□□□□ -0.5
CAPN9-202ENST00000354537 ZNF541Q9H0D2 1346 aa11.92□□□□□ -0.5
CAPN9-202ENST00000354537 COL11A2P13942 1736 aaPredicted RBP11.92□□□□□ -0.5
CAPN9-202ENST00000354537 KRT37O76014 449 aa11.92□□□□□ -0.5
CAPN9-202ENST00000354537 TMEM63AO94886 807 aa11.92□□□□□ -0.5
CAPN9-202ENST00000354537 PIM1P11309 404 aaPredicted RBP11.92□□□□□ -0.5
CAPN9-202ENST00000354537 MYCLP12524 364 aaPredicted RBP11.92□□□□□ -0.5
CAPN9-202ENST00000354537 ANPEPP15144 967 aa11.92□□□□□ -0.5
CAPN9-202ENST00000354537 CCND2P30279 289 aa11.92□□□□□ -0.5
CAPN9-202ENST00000354537 NAMPTP43490 491 aa11.92□□□□□ -0.5
CAPN9-202ENST00000354537 GDF10P55107 478 aa11.92□□□□□ -0.5
CAPN9-202ENST00000354537 WNT7BP56706 349 aa11.92□□□□□ -0.5
CAPN9-202ENST00000354537 RPS6P62753 249 aaKnown RBP11.92□□□□□ -0.5
CAPN9-202ENST00000354537 XIAPP98170 497 aa11.92□□□□□ -0.5
CAPN9-202ENST00000354537 FAAP100Q0VG06 881 aa11.92□□□□□ -0.5
CAPN9-202ENST00000354537 HNRNPDQ14103 355 aaKnown RBP11.92□□□□□ -0.5
CAPN9-202ENST00000354537 LMBRD2Q68DH5 695 aaPredicted RBP11.92□□□□□ -0.5
CAPN9-202ENST00000354537 VSIG10LQ86VR7 867 aa11.92□□□□□ -0.5
CAPN9-202ENST00000354537 TTC17Q96AE7 1141 aa11.92□□□□□ -0.5
CAPN9-202ENST00000354537 HAUS1Q96CS2 278 aa11.92□□□□□ -0.5
CAPN9-202ENST00000354537 MTBPQ96DY7 904 aa11.92□□□□□ -0.5
CAPN9-202ENST00000354537 RMDN3Q96TC7 470 aa11.92□□□□□ -0.5
CAPN9-202ENST00000354537 IQCGQ9H095 443 aaKnown RBP11.92□□□□□ -0.5
CAPN9-202ENST00000354537 LHX5Q9H2C1 402 aa11.92□□□□□ -0.5
CAPN9-202ENST00000354537 TMEM134Q9H6X4 195 aa11.92□□□□□ -0.5
CAPN9-202ENST00000354537 GINM1Q9NU53 330 aa11.92□□□□□ -0.5
CAPN9-202ENST00000354537 SIRPGQ9P1W8 387 aa11.92□□□□□ -0.5
CAPN9-202ENST00000354537 PLLPQ9Y342 182 aa11.92□□□□□ -0.5
CAPN9-202ENST00000354537 CNTNAP1P78357 1384 aa11.92□□□□□ -0.5
CAPN9-202ENST00000354537 ADGRA2Q96PE1 1338 aa11.92□□□□□ -0.5
CAPN9-202ENST00000354537 ARID2Q68CP9 1835 aa11.92□□□□□ -0.5
CAPN9-202ENST00000354537 TCRBV9S1A1TA0A576 114 aa11.92□□□□□ -0.5
CAPN9-202ENST00000354537 EIF4E1BA6NMX2 242 aaKnown RBP11.92□□□□□ -0.5
CAPN9-202ENST00000354537 TCP10L2B9ZVM9 353 aa11.92□□□□□ -0.5
CAPN9-202ENST00000354537 GOLGA8RI6L899 631 aa11.92□□□□□ -0.5
CAPN9-202ENST00000354537 BIRC5O15392 142 aa11.92□□□□□ -0.5
CAPN9-202ENST00000354537 STAM2O75886 525 aa11.92□□□□□ -0.5
CAPN9-202ENST00000354537 SNRPAP09012 282 aaKnown RBP11.92□□□□□ -0.5
CAPN9-202ENST00000354537 ELK3P41970 407 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms