RNA–Protein interactions for RNA: ENST00000354506.10

RPE-201, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 3,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-201ENST00000354506 BANPQ8N9N5 519 aa10.06□□□□□ -0.8
RPE-201ENST00000354506 ANKRD27Q96NW4 1050 aa10.06□□□□□ -0.8
RPE-201ENST00000354506 PPP1R16BQ96T49 567 aa10.06□□□□□ -0.8
RPE-201ENST00000354506 ARL8BQ9NVJ2 186 aa10.06□□□□□ -0.8
RPE-201ENST00000354506 HEY2Q9UBP5 337 aa10.06□□□□□ -0.8
RPE-201ENST00000354506 CHMP2BQ9UQN3 213 aa10.06□□□□□ -0.8
RPE-201ENST00000354506 WASF2Q9Y6W5 498 aa10.06□□□□□ -0.8
RPE-201ENST00000354506 MGAMO43451 1857 aa10.06□□□□□ -0.8
RPE-201ENST00000354506 ADCY3O60266 1144 aa10.06□□□□□ -0.8
RPE-201ENST00000354506 MSCO60682 206 aa10.06□□□□□ -0.8
RPE-201ENST00000354506 DCTN3O75935 186 aa10.06□□□□□ -0.8
RPE-201ENST00000354506 BAG2O95816 211 aa10.06□□□□□ -0.8
RPE-201ENST00000354506 WEE2P0C1S8 567 aa10.06□□□□□ -0.8
RPE-201ENST00000354506 DHRS4L1P0CG22 281 aa10.06□□□□□ -0.8
RPE-201ENST00000354506 GMPRP36959 345 aa10.06□□□□□ -0.8
RPE-201ENST00000354506 CETN2P41208 172 aa10.06□□□□□ -0.8
RPE-201ENST00000354506 TNFSF9P41273 254 aa10.06□□□□□ -0.8
RPE-201ENST00000354506 BASP1P80723 227 aaKnown RBP10.06□□□□□ -0.8
RPE-201ENST00000354506 TAF5Q15542 800 aa10.06□□□□□ -0.8
RPE-201ENST00000354506 EML3Q32P44 896 aa10.06□□□□□ -0.8
RPE-201ENST00000354506 ANO7Q6IWH7 933 aa10.06□□□□□ -0.8
RPE-201ENST00000354506 DCUN1D2Q6PH85 259 aa10.06□□□□□ -0.8
RPE-201ENST00000354506 CCDC125Q86Z20 511 aa10.06□□□□□ -0.8
RPE-201ENST00000354506 BRSK2Q8IWQ3 736 aa10.06□□□□□ -0.8
RPE-201ENST00000354506 PHC3Q8NDX5 983 aa10.06□□□□□ -0.8
RPE-201ENST00000354506 FNIP1Q8TF40 1166 aa10.06□□□□□ -0.8
RPE-201ENST00000354506 MIPEPQ99797 713 aa10.06□□□□□ -0.8
RPE-201ENST00000354506 XYLT2Q9H1B5 865 aa10.06□□□□□ -0.8
RPE-201ENST00000354506 CYTH4Q9UIA0 394 aa10.06□□□□□ -0.8
RPE-201ENST00000354506 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.06□□□□□ -0.8
RPE-201ENST00000354506 ANK1P16157 1881 aa10.05□□□□□ -0.8
RPE-201ENST00000354506 SIGLEC16A6NMB1 481 aa10.05□□□□□ -0.8
RPE-201ENST00000354506 E7ENQ6 273 aa10.05□□□□□ -0.8
RPE-201ENST00000354506 SMNDC1O75940 238 aaKnown RBP eCLIP10.05□□□□□ -0.81e-6■■■■■ 28.6
RPE-201ENST00000354506 TSHRP16473 764 aa10.05□□□□□ -0.8
RPE-201ENST00000354506 BRD2P25440 801 aaKnown RBP10.05□□□□□ -0.8
RPE-201ENST00000354506 RXRBP28702 533 aa10.05□□□□□ -0.8
RPE-201ENST00000354506 SERPINB3P29508 390 aa10.05□□□□□ -0.8
RPE-201ENST00000354506 ASPAP45381 313 aa10.05□□□□□ -0.8
RPE-201ENST00000354506 CAPSQ13938 189 aa10.05□□□□□ -0.8
RPE-201ENST00000354506 SNRNP48Q6IEG0 339 aaKnown RBP10.05□□□□□ -0.8
RPE-201ENST00000354506 ZPBP2Q6X784 338 aa10.05□□□□□ -0.8
RPE-201ENST00000354506 CTAGE3PQ8IX95 158 aa10.05□□□□□ -0.8
RPE-201ENST00000354506 PPIL6Q8IXY8 311 aa10.05□□□□□ -0.8
RPE-201ENST00000354506 TCP10LQ8TDR4 215 aa10.05□□□□□ -0.8
RPE-201ENST00000354506 WDR60Q8WVS4 1066 aa10.05□□□□□ -0.8
RPE-201ENST00000354506 LHX5Q9H2C1 402 aa10.05□□□□□ -0.8
RPE-201ENST00000354506 ACSS3Q9H6R3 686 aa10.05□□□□□ -0.8
RPE-201ENST00000354506 KCNK13Q9HB14 408 aa10.05□□□□□ -0.8
RPE-201ENST00000354506 ZNF302Q9NR11 478 aa10.05□□□□□ -0.8
RPE-201ENST00000354506 CISHQ9NSE2 258 aa10.05□□□□□ -0.8
RPE-201ENST00000354506 PACSIN3Q9UKS6 424 aa10.05□□□□□ -0.8
RPE-201ENST00000354506 NR2E3Q9Y5X4 410 aa10.05□□□□□ -0.8
RPE-201ENST00000354506 SSC5DA1L4H1 1573 aa10.05□□□□□ -0.8
RPE-201ENST00000354506 A0A1B0GVG6 124 aa10.05□□□□□ -0.8
RPE-201ENST00000354506 USP1O94782 785 aa10.05□□□□□ -0.8
RPE-201ENST00000354506 CD48P09326 243 aa10.05□□□□□ -0.8
RPE-201ENST00000354506 ETV4P43268 484 aa10.05□□□□□ -0.8
RPE-201ENST00000354506 MYL6P60660 151 aa10.05□□□□□ -0.8
RPE-201ENST00000354506 KDSRQ06136 332 aa10.05□□□□□ -0.8
RPE-201ENST00000354506 FSTL1Q12841 308 aa10.05□□□□□ -0.8
RPE-201ENST00000354506 CMPK2Q5EBM0 449 aa10.05□□□□□ -0.8
RPE-201ENST00000354506 BBS12Q6ZW61 710 aa10.05□□□□□ -0.8
RPE-201ENST00000354506 TMEM35BQ8NCS4 154 aa10.05□□□□□ -0.8
RPE-201ENST00000354506 USP6NLQ92738 828 aa10.05□□□□□ -0.8
RPE-201ENST00000354506 FAM111AQ96PZ2 611 aa10.05□□□□□ -0.8
RPE-201ENST00000354506 SLC13A1Q9BZW2 595 aa10.05□□□□□ -0.8
RPE-201ENST00000354506 RPL26L1Q9UNX3 145 aaKnown RBP10.05□□□□□ -0.8
RPE-201ENST00000354506 AGTPBP1Q9UPW5 1226 aa10.05□□□□□ -0.8
RPE-201ENST00000354506 LRRIQ4A6NIV6 560 aa10.04□□□□□ -0.8
RPE-201ENST00000354506 TM9SF1O15321 606 aa10.04□□□□□ -0.8
RPE-201ENST00000354506 LRCH4O75427 683 aa10.04□□□□□ -0.8
RPE-201ENST00000354506 C1QAP02745 245 aa10.04□□□□□ -0.8
RPE-201ENST00000354506 TPBGLP0DKB5 382 aa10.04□□□□□ -0.8
RPE-201ENST00000354506 BGNP21810 368 aa10.04□□□□□ -0.8
RPE-201ENST00000354506 CALB2P22676 271 aa10.04□□□□□ -0.8
RPE-201ENST00000354506 KDELR1P24390 212 aa10.04□□□□□ -0.8
RPE-201ENST00000354506 RFC1P35251 1148 aaPredicted RBP10.04□□□□□ -0.8
RPE-201ENST00000354506 RPL22P35268 128 aaKnown RBP10.04□□□□□ -0.8
RPE-201ENST00000354506 HIF1AQ16665 826 aa10.04□□□□□ -0.8
RPE-201ENST00000354506 RAB6CQ53S08 254 aa10.04□□□□□ -0.8
RPE-201ENST00000354506 CDCA2Q69YH5 1023 aaPredicted RBP10.04□□□□□ -0.8
RPE-201ENST00000354506 GPAT2Q6NUI2 795 aa10.04□□□□□ -0.8
RPE-201ENST00000354506 DNAJC24Q6P3W2 148 aa10.04□□□□□ -0.8
RPE-201ENST00000354506 C3orf62Q6ZUJ4 267 aa10.04□□□□□ -0.8
RPE-201ENST00000354506 ALYREFQ86V81 257 aaKnown RBP10.04□□□□□ -0.8
RPE-201ENST00000354506 CMASQ8NFW8 434 aaPredicted RBP10.04□□□□□ -0.8
RPE-201ENST00000354506 CFAP61Q8NHU2 1237 aa10.04□□□□□ -0.8
RPE-201ENST00000354506 DEPTORQ8TB45 409 aa10.04□□□□□ -0.8
RPE-201ENST00000354506 ZNF483Q8TF39 744 aaPredicted RBP10.04□□□□□ -0.8
RPE-201ENST00000354506 TTC1Q99614 292 aa10.04□□□□□ -0.8
RPE-201ENST00000354506 TCHPQ9BT92 498 aa10.04□□□□□ -0.8
RPE-201ENST00000354506 RAB6CQ9H0N0 254 aa10.04□□□□□ -0.8
RPE-201ENST00000354506 VPS11Q9H270 941 aa10.04□□□□□ -0.8
RPE-201ENST00000354506 RNPEPL1Q9HAU8 725 aa10.04□□□□□ -0.8
RPE-201ENST00000354506 ACSS2Q9NR19 701 aa10.04□□□□□ -0.8
RPE-201ENST00000354506 SAR1AQ9NR31 198 aa10.04□□□□□ -0.8
RPE-201ENST00000354506 LIN7AO14910 233 aaPredicted RBP10.04□□□□□ -0.8
RPE-201ENST00000354506 CSDE1O75534 798 aaKnown RBP10.04□□□□□ -0.8
RPE-201ENST00000354506 GRAP2O75791 330 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms