RNA–Protein interactions for RNA: ENST00000354433.7

CDRT1-202, CMT1A duplicated region transcript 1, humanhuman

TSL 2 BASIC

Gene CDRT1, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-202ENST00000354433 SCARA3Q6AZY7 606 aa12.3□□□□□ -0.44
CDRT1-202ENST00000354433 ZC3H14Q6PJT7 736 aaKnown RBP12.3□□□□□ -0.44
CDRT1-202ENST00000354433 ASCL5Q7RTU5 278 aa12.3□□□□□ -0.44
CDRT1-202ENST00000354433 TRAPPC11Q7Z392 1133 aa12.3□□□□□ -0.44
CDRT1-202ENST00000354433 OSTM1Q86WC4 334 aa12.3□□□□□ -0.44
CDRT1-202ENST00000354433 CXorf38Q8TB03 319 aa12.3□□□□□ -0.44
CDRT1-202ENST00000354433 ERGIC2Q96RQ1 377 aa12.3□□□□□ -0.44
CDRT1-202ENST00000354433 CGRRF1Q99675 332 aa12.3□□□□□ -0.44
CDRT1-202ENST00000354433 TRPV4Q9HBA0 871 aa12.3□□□□□ -0.44
CDRT1-202ENST00000354433 DLGAP2Q9P1A6 1054 aa12.3□□□□□ -0.44
CDRT1-202ENST00000354433 GTF3C4Q9UKN8 822 aa12.3□□□□□ -0.44
CDRT1-202ENST00000354433 NCANO14594 1321 aa12.29□□□□□ -0.44
CDRT1-202ENST00000354433 PRR23AA6NEV1 266 aa12.29□□□□□ -0.44
CDRT1-202ENST00000354433 PROB1E7EW31 1015 aa12.29□□□□□ -0.44
CDRT1-202ENST00000354433 MAN2B1O00754 1011 aa12.29□□□□□ -0.44
CDRT1-202ENST00000354433 CSH1P0DML2 217 aa12.29□□□□□ -0.44
CDRT1-202ENST00000354433 CSH2P0DML3 217 aa12.29□□□□□ -0.44
CDRT1-202ENST00000354433 FECHP22830 423 aa12.29□□□□□ -0.44
CDRT1-202ENST00000354433 CYP2F1P24903 491 aa12.29□□□□□ -0.44
CDRT1-202ENST00000354433 AVPR1AP37288 418 aa12.29□□□□□ -0.44
CDRT1-202ENST00000354433 KPNA1P52294 538 aaPredicted RBP12.29□□□□□ -0.44
CDRT1-202ENST00000354433 RPL10AP62906 217 aaKnown RBP12.29□□□□□ -0.44
CDRT1-202ENST00000354433 TNNC1P63316 161 aa12.29□□□□□ -0.44
CDRT1-202ENST00000354433 CYP24A1Q07973 514 aa12.29□□□□□ -0.44
CDRT1-202ENST00000354433 BIRC3Q13489 604 aa12.29□□□□□ -0.44
CDRT1-202ENST00000354433 PSMD6Q15008 389 aa12.29□□□□□ -0.44
CDRT1-202ENST00000354433 DDR2Q16832 855 aa12.29□□□□□ -0.44
CDRT1-202ENST00000354433 CCDC142Q17RM4 750 aa12.29□□□□□ -0.44
CDRT1-202ENST00000354433 SOWAHAQ2M3V2 549 aa12.29□□□□□ -0.44
CDRT1-202ENST00000354433 VWA3BQ502W6 1294 aa12.29□□□□□ -0.44
CDRT1-202ENST00000354433 FIGNQ5HY92 759 aa12.29□□□□□ -0.44
CDRT1-202ENST00000354433 MIIPQ5JXC2 388 aa12.29□□□□□ -0.44
CDRT1-202ENST00000354433 CREBRFQ8IUR6 639 aa12.29□□□□□ -0.44
CDRT1-202ENST00000354433 SCN4BQ8IWT1 228 aa12.29□□□□□ -0.44
CDRT1-202ENST00000354433 TTC16Q8NEE8 873 aa12.29□□□□□ -0.44
CDRT1-202ENST00000354433 GOLGA5Q8TBA6 731 aa12.29□□□□□ -0.44
CDRT1-202ENST00000354433 SPATA18Q8TC71 538 aa12.29□□□□□ -0.44
CDRT1-202ENST00000354433 TMEM174Q8WUU8 243 aa12.29□□□□□ -0.44
CDRT1-202ENST00000354433 FAM3CQ92520 227 aa12.29□□□□□ -0.44
CDRT1-202ENST00000354433 NELL2Q99435 816 aa12.29□□□□□ -0.44
CDRT1-202ENST00000354433 BAG1Q99933 345 aaPredicted RBP12.29□□□□□ -0.44
CDRT1-202ENST00000354433 SYT15Q9BQS2 421 aa12.29□□□□□ -0.44
CDRT1-202ENST00000354433 OSBPL6Q9BZF3 934 aa12.29□□□□□ -0.44
CDRT1-202ENST00000354433 SMG9Q9H0W8 520 aaKnown RBP12.29□□□□□ -0.44
CDRT1-202ENST00000354433 TASP1Q9H6P5 420 aa12.29□□□□□ -0.44
CDRT1-202ENST00000354433 CGNQ9P2M7 1197 aaKnown RBP12.29□□□□□ -0.44
CDRT1-202ENST00000354433 R4GN57 208 aa12.29□□□□□ -0.44
CDRT1-202ENST00000354433 SLC38A8A6NNN8 435 aa12.28□□□□□ -0.44
CDRT1-202ENST00000354433 SLC16A3O15427 465 aaKnown RBP12.28□□□□□ -0.44
CDRT1-202ENST00000354433 MFAP3LO75121 409 aa12.28□□□□□ -0.44
CDRT1-202ENST00000354433 PHACTR2O75167 634 aa12.28□□□□□ -0.44
CDRT1-202ENST00000354433 PRAMEF12O95522 483 aa12.28□□□□□ -0.44
CDRT1-202ENST00000354433 GYPCP04921 128 aa12.28□□□□□ -0.44
CDRT1-202ENST00000354433 MAGEA9P43362 315 aa12.28□□□□□ -0.44
CDRT1-202ENST00000354433 CYP27A1Q02318 531 aa12.28□□□□□ -0.44
CDRT1-202ENST00000354433 ADAM9Q13443 819 aa12.28□□□□□ -0.44
CDRT1-202ENST00000354433 C4orf50Q6ZRC1 276 aa12.28□□□□□ -0.44
CDRT1-202ENST00000354433 DPH6Q7L8W6 267 aa12.28□□□□□ -0.44
CDRT1-202ENST00000354433 TMEM139Q8IV31 216 aa12.28□□□□□ -0.44
CDRT1-202ENST00000354433 TTC8Q8TAM2 541 aa12.28□□□□□ -0.44
CDRT1-202ENST00000354433 MRPS31Q92665 395 aaKnown RBP12.28□□□□□ -0.44
CDRT1-202ENST00000354433 MYLPFQ96A32 169 aa12.28□□□□□ -0.44
CDRT1-202ENST00000354433 RSPRY1Q96DX4 576 aa12.28□□□□□ -0.44
CDRT1-202ENST00000354433 ZFYVE19Q96K21 471 aa12.28□□□□□ -0.44
CDRT1-202ENST00000354433 MKNK1Q9BUB5 465 aa12.28□□□□□ -0.44
CDRT1-202ENST00000354433 NDST4Q9H3R1 872 aa12.28□□□□□ -0.44
CDRT1-202ENST00000354433 IL21Q9HBE4 155 aa12.28□□□□□ -0.44
CDRT1-202ENST00000354433 ABCB6Q9NP58 842 aa12.28□□□□□ -0.44
CDRT1-202ENST00000354433 UXTQ9UBK9 157 aaPredicted RBP12.28□□□□□ -0.44
CDRT1-202ENST00000354433 A0A1W2PQJ5 194 aa12.27□□□□□ -0.44
CDRT1-202ENST00000354433 MYBPHLA2RUH7 354 aa12.27□□□□□ -0.44
CDRT1-202ENST00000354433 GABRDO14764 452 aa12.27□□□□□ -0.44
CDRT1-202ENST00000354433 CHADO15335 359 aa12.27□□□□□ -0.44
CDRT1-202ENST00000354433 PDGFRBP09619 1106 aa12.27□□□□□ -0.44
CDRT1-202ENST00000354433 SP9P0CG40 484 aa12.27□□□□□ -0.44
CDRT1-202ENST00000354433 CASP4P49662 377 aa12.27□□□□□ -0.44
CDRT1-202ENST00000354433 FCHO2Q0JRZ9 810 aa12.27□□□□□ -0.44
CDRT1-202ENST00000354433 WDR72Q3MJ13 1102 aa12.27□□□□□ -0.44
CDRT1-202ENST00000354433 ARHGAP29Q52LW3 1261 aa12.27□□□□□ -0.44
CDRT1-202ENST00000354433 CCAR2Q8N163 923 aaKnown RBP12.27□□□□□ -0.44
CDRT1-202ENST00000354433 MAB21L3Q8N8X9 362 aa12.27□□□□□ -0.44
CDRT1-202ENST00000354433 OR6B3Q8NGW1 331 aa12.27□□□□□ -0.44
CDRT1-202ENST00000354433 BPIFB1Q8TDL5 484 aa12.27□□□□□ -0.44
CDRT1-202ENST00000354433 KBTBD7Q8WVZ9 684 aa12.27□□□□□ -0.44
CDRT1-202ENST00000354433 FUBP3Q96I24 572 aaKnown RBP eCLIP12.27□□□□□ -0.44
CDRT1-202ENST00000354433 HINFPQ9BQA5 517 aa12.27□□□□□ -0.44
CDRT1-202ENST00000354433 SNX25Q9H3E2 840 aa12.27□□□□□ -0.44
CDRT1-202ENST00000354433 METTL14Q9HCE5 456 aaKnown RBP12.27□□□□□ -0.44
CDRT1-202ENST00000354433 TRPC7Q9HCX4 862 aa12.27□□□□□ -0.44
CDRT1-202ENST00000354433 TRPV5Q9NQA5 729 aa12.27□□□□□ -0.44
CDRT1-202ENST00000354433 NXF1Q9UBU9 619 aaKnown RBP12.27□□□□□ -0.44
CDRT1-202ENST00000354433 CDH9Q9ULB4 789 aa12.27□□□□□ -0.44
CDRT1-202ENST00000354433 TUBB4AP04350 444 aa12.26□□□□□ -0.45
CDRT1-202ENST00000354433 NR2F2P24468 414 aa12.26□□□□□ -0.45
CDRT1-202ENST00000354433 LMO2P25791 158 aa12.26□□□□□ -0.45
CDRT1-202ENST00000354433 ANXA13P27216 316 aa12.26□□□□□ -0.45
CDRT1-202ENST00000354433 CASP14P31944 242 aa12.26□□□□□ -0.45
CDRT1-202ENST00000354433 SOX9P48436 509 aa12.26□□□□□ -0.45
CDRT1-202ENST00000354433 ADKP55263 362 aaKnown RBP12.26□□□□□ -0.45
CDRT1-202ENST00000354433 CSTF1Q05048 431 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms