RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 CCDC117Q8IWD4 279 aaPredicted RBP1.86□□□□□ -2.11
BRCA1-202ENST00000354071 UNC5BQ8IZJ1 945 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 Q8NFD4 153 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 FLCNQ8NFG4 579 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 OR5M3Q8NGP4 307 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 WDR48Q8TAF3 677 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 THAP4Q8WY91 577 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 FAM167AQ96KS9 214 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 SLC46A1Q96NT5 459 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 NEU1Q99519 415 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 PRDM13Q9H4Q3 707 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 PLEKHA2Q9HB19 425 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 SH3GLB2Q9NR46 395 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP1.86□□□□□ -2.117e-7■□□□□ 9.9
BRCA1-202ENST00000354071 DNMT3BQ9UBC3 853 aaKnown RBP1.86□□□□□ -2.11
BRCA1-202ENST00000354071 CTNND2Q9UQB3 1225 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 PCDHB7Q9Y5E2 793 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 PEG3Q9GZU2 1588 aa1.86□□□□□ -2.11
BRCA1-202ENST00000354071 HEXIM1O94992 359 aaKnown RBP1.85□□□□□ -2.11
BRCA1-202ENST00000354071 MPOP05164 745 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 RPLP2P05387 115 aaKnown RBP1.85□□□□□ -2.11
BRCA1-202ENST00000354071 FCER1AP12319 257 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 LYL1P12980 280 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 KLRC1P26715 233 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 ACVR2AP27037 513 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 DPP6P42658 865 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 COPAP53621 1224 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 BPIFB4P59827 614 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 DUSP2Q05923 314 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 MESP2Q0VG99 397 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 EIF4HQ15056 248 aaKnown RBP1.85□□□□□ -2.11
BRCA1-202ENST00000354071 LY6KQ17RY6 165 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 PRR16Q569H4 304 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 MAP3K21Q5TCX8 1036 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 ABLIM2Q6H8Q1 611 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 ACAD10Q6JQN1 1059 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 RINT1Q6NUQ1 792 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 NEK10Q6ZWH5 1172 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 ZNF365Q70YC5 407 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 DNAJB7Q7Z6W7 309 aaPredicted RBP1.85□□□□□ -2.11
BRCA1-202ENST00000354071 NRSN1Q8IZ57 195 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 ABI1Q8IZP0 508 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 C11orf44Q8N8P7 122 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 CREB3L4Q8TEY5 395 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 SUCLG2Q96I99 432 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 BRD8Q9H0E9 1235 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 SIL1Q9H173 461 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 ABHD16BQ9H3Z7 469 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 GBA2Q9HCG7 927 aaPredicted RBP1.85□□□□□ -2.11
BRCA1-202ENST00000354071 SAYSD1Q9NPB0 183 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 HSPBP1Q9NZL4 362 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 CDYLQ9Y232 598 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 UNC13BO14795 1591 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 SYNMO15061 1565 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 SMARCA2P51531 1590 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 RIMS1Q86UR5 1692 aaKnown RBP1.85□□□□□ -2.11
BRCA1-202ENST00000354071 RELNP78509 3460 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 RPGRIP1LQ68CZ1 1315 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 A0A1B0GTL3 188 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 MYOCOSA0A1B0GUC4 107 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 A0A1W2PRQ8 180 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 FAM90A20PA6NIJ5 464 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 E7EVH7 732 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 M0QZQ0 153 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 DHHO43323 396 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 SRGAP2O75044 1071 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 PTP4A3O75365 173 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 FSBPO95073 299 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 ADORA2AP29274 412 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 HARS2P49590 506 aaKnown RBP1.85□□□□□ -2.11
BRCA1-202ENST00000354071 CPT1AP50416 773 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 DCTN2Q13561 401 aaKnown RBP1.85□□□□□ -2.11
BRCA1-202ENST00000354071 HABP2Q14520 560 aaPredicted RBP1.85□□□□□ -2.11
BRCA1-202ENST00000354071 SLC29A2Q14542 456 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 PABPC1LQ4VXU2 614 aaKnown RBP1.85□□□□□ -2.11
BRCA1-202ENST00000354071 TRMT10BQ6PF06 316 aaKnown RBP1.85□□□□□ -2.11
BRCA1-202ENST00000354071 TMCO3Q6UWJ1 677 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 CCDC129Q6ZRS4 1044 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 DENND5BQ6ZUT9 1274 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 KRT28Q7Z3Y7 464 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 SPPL2CQ8IUH8 684 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP1.85□□□□□ -2.11
BRCA1-202ENST00000354071 PLA2G15Q8NCC3 412 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 MAFAQ8NHW3 353 aaPredicted RBP1.85□□□□□ -2.11
BRCA1-202ENST00000354071 ABHD4Q8TB40 342 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 NUP133Q8WUM0 1156 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 RBM17Q96I25 401 aaKnown RBP1.85□□□□□ -2.11
BRCA1-202ENST00000354071 DESI2Q9BSY9 194 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 C11orf84Q9BUA3 381 aaPredicted RBP1.85□□□□□ -2.11
BRCA1-202ENST00000354071 ITPAQ9BY32 194 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 CPEB1Q9BZB8 566 aaKnown RBP1.85□□□□□ -2.11
BRCA1-202ENST00000354071 CXorf36Q9H7Y0 433 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 SEPT11Q9NVA2 429 aaKnown RBP1.85□□□□□ -2.11
BRCA1-202ENST00000354071 NFKBIL1Q9UBC1 381 aaPredicted RBP1.85□□□□□ -2.11
BRCA1-202ENST00000354071 DTNAQ9Y4J8 743 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 STRCP1A6NGW2 1772 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 PI4KAP2A4QPH2 592 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 VWA3AA6NCI4 1184 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 KLK10O43240 276 aa1.85□□□□□ -2.11
BRCA1-202ENST00000354071 KCNQ3O43525 872 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms