RNA–Protein interactions for RNA: ENST00000353909.7

MBD1-205, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-205ENST00000353909 SOX4Q06945 474 aaPredicted RBP16.33■□□□□ 0.2
MBD1-205ENST00000353909 CCDC142Q17RM4 750 aa16.33■□□□□ 0.2
MBD1-205ENST00000353909 TNFAIP8L3Q5GJ75 292 aa16.33■□□□□ 0.2
MBD1-205ENST00000353909 EXOC3L1Q86VI1 746 aa16.33■□□□□ 0.2
MBD1-205ENST00000353909 KCTD6Q8NC69 237 aa16.33■□□□□ 0.2
MBD1-205ENST00000353909 IPO4Q8TEX9 1081 aaKnown RBP16.33■□□□□ 0.2
MBD1-205ENST00000353909 NKD2Q969F2 451 aaPredicted RBP16.33■□□□□ 0.2
MBD1-205ENST00000353909 C2CD4BA6NLJ0 364 aa16.32■□□□□ 0.2
MBD1-205ENST00000353909 GOLGA8MH3BSY2 632 aa16.32■□□□□ 0.2
MBD1-205ENST00000353909 MYO1CO00159 1063 aa16.32■□□□□ 0.2
MBD1-205ENST00000353909 BANF1O75531 89 aa16.32■□□□□ 0.2
MBD1-205ENST00000353909 TRUB2O95900 331 aaKnown RBP16.32■□□□□ 0.2
MBD1-205ENST00000353909 KRT7P08729 469 aa16.32■□□□□ 0.2
MBD1-205ENST00000353909 FGFR1P11362 822 aa16.32■□□□□ 0.2
MBD1-205ENST00000353909 PSEN2P49810 448 aa16.32■□□□□ 0.2
MBD1-205ENST00000353909 ZNF157P51786 506 aaPredicted RBP16.32■□□□□ 0.2
MBD1-205ENST00000353909 HADHQ16836 314 aaKnown RBP16.32■□□□□ 0.2
MBD1-205ENST00000353909 C9orf57Q5W0N0 161 aa16.32■□□□□ 0.2
MBD1-205ENST00000353909 NT5DC4Q86YG4 428 aa16.32■□□□□ 0.2
MBD1-205ENST00000353909 CYP4X1Q8N118 509 aa16.32■□□□□ 0.2
MBD1-205ENST00000353909 C7orf31Q8N865 590 aa16.32■□□□□ 0.2
MBD1-205ENST00000353909 ARRDC4Q8NCT1 418 aa16.32■□□□□ 0.2
MBD1-205ENST00000353909 OR6B3Q8NGW1 331 aa16.32■□□□□ 0.2
MBD1-205ENST00000353909 PLEKHA5Q9HAU0 1116 aa16.32■□□□□ 0.2
MBD1-205ENST00000353909 TBK1Q9UHD2 729 aa16.32■□□□□ 0.2
MBD1-205ENST00000353909 SMIM28A0A1B0GU29 152 aa16.32■□□□□ 0.2
MBD1-205ENST00000353909 DNALI1O14645 258 aaPredicted RBP16.32■□□□□ 0.2
MBD1-205ENST00000353909 RNF8O76064 485 aa16.32■□□□□ 0.2
MBD1-205ENST00000353909 ZNF143P52747 638 aaPredicted RBP16.32■□□□□ 0.2
MBD1-205ENST00000353909 YARSP54577 528 aaKnown RBP16.32■□□□□ 0.2
MBD1-205ENST00000353909 CAV1Q03135 178 aa16.32■□□□□ 0.2
MBD1-205ENST00000353909 PKDCCQ504Y2 493 aa16.32■□□□□ 0.2
MBD1-205ENST00000353909 NPNTQ6UXI9 565 aa16.32■□□□□ 0.2
MBD1-205ENST00000353909 CMASQ8NFW8 434 aaPredicted RBP16.32■□□□□ 0.2
MBD1-205ENST00000353909 KHSRPQ92945 711 aaKnown RBP eCLIP16.32■□□□□ 0.2
MBD1-205ENST00000353909 CACNG4Q9UBN1 327 aa16.32■□□□□ 0.2
MBD1-205ENST00000353909 GMNCA6NCL1 334 aa16.32■□□□□ 0.2
MBD1-205ENST00000353909 MYADML2A6NDP7 307 aa16.32■□□□□ 0.2
MBD1-205ENST00000353909 FAM107AO95990 144 aa16.32■□□□□ 0.2
MBD1-205ENST00000353909 AGTP01019 485 aa16.32■□□□□ 0.2
MBD1-205ENST00000353909 TFE3P19532 575 aaPredicted RBP16.32■□□□□ 0.2
MBD1-205ENST00000353909 SF3A3Q12874 501 aaKnown RBP eCLIP16.32■□□□□ 0.23e-8■■■■■ 54.4
MBD1-205ENST00000353909 UBXN11Q5T124 520 aa16.32■□□□□ 0.2
MBD1-205ENST00000353909 CAPN12Q6ZSI9 719 aa16.32■□□□□ 0.2
MBD1-205ENST00000353909 BBS12Q6ZW61 710 aa16.32■□□□□ 0.2
MBD1-205ENST00000353909 CLEC4CQ8WTT0 213 aa16.32■□□□□ 0.2
MBD1-205ENST00000353909 MIS12Q9H081 205 aa16.32■□□□□ 0.2
MBD1-205ENST00000353909 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.32■□□□□ 0.2
MBD1-205ENST00000353909 GPATCH2LQ9NWQ4 482 aa16.32■□□□□ 0.2
MBD1-205ENST00000353909 DRG1Q9Y295 367 aaKnown RBP16.32■□□□□ 0.2
MBD1-205ENST00000353909 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.32■□□□□ 0.2
MBD1-205ENST00000353909 HAS3O00219 553 aa16.31■□□□□ 0.2
MBD1-205ENST00000353909 ITGAVP06756 1048 aa16.31■□□□□ 0.2
MBD1-205ENST00000353909 CCDC130P13994 396 aa16.31■□□□□ 0.2
MBD1-205ENST00000353909 GPD1P21695 349 aa16.31■□□□□ 0.2
MBD1-205ENST00000353909 CTGFP29279 349 aa16.31■□□□□ 0.2
MBD1-205ENST00000353909 TAZQ16635 292 aa16.31■□□□□ 0.2
MBD1-205ENST00000353909 RASAL3Q86YV0 1011 aa16.31■□□□□ 0.2
MBD1-205ENST00000353909 KBTBD7Q8WVZ9 684 aa16.31■□□□□ 0.2
MBD1-205ENST00000353909 CNTN3Q9P232 1028 aa16.31■□□□□ 0.2
MBD1-205ENST00000353909 PAPSS1O43252 624 aaPredicted RBP16.31■□□□□ 0.2
MBD1-205ENST00000353909 MAGEA4P43358 317 aa16.31■□□□□ 0.2
MBD1-205ENST00000353909 LMNB2Q03252 620 aa16.31■□□□□ 0.2
MBD1-205ENST00000353909 CCDC14Q49A88 953 aa16.31■□□□□ 0.2
MBD1-205ENST00000353909 RFX6Q8HWS3 928 aa16.31■□□□□ 0.2
MBD1-205ENST00000353909 UNC45BQ8IWX7 931 aa16.31■□□□□ 0.2
MBD1-205ENST00000353909 ZCCHC9Q8N567 271 aaKnown RBP16.31■□□□□ 0.2
MBD1-205ENST00000353909 BEST2Q8NFU1 509 aa16.31■□□□□ 0.2
MBD1-205ENST00000353909 LRRN4Q8WUT4 740 aa16.31■□□□□ 0.2
MBD1-205ENST00000353909 SLC35F5Q8WV83 523 aa16.31■□□□□ 0.2
MBD1-205ENST00000353909 USP6NLQ92738 828 aa16.31■□□□□ 0.2
MBD1-205ENST00000353909 ADAM33Q9BZ11 813 aa16.31■□□□□ 0.2
MBD1-205ENST00000353909 MAGEB5Q9BZ81 275 aa16.31■□□□□ 0.2
MBD1-205ENST00000353909 SAYSD1Q9NPB0 183 aa16.31■□□□□ 0.2
MBD1-205ENST00000353909 FAM169AQ9Y6X4 670 aa16.31■□□□□ 0.2
MBD1-205ENST00000353909 MEIS3P2A8K0S8 358 aa16.3■□□□□ 0.2
MBD1-205ENST00000353909 A8MXQ7 604 aa16.3■□□□□ 0.2
MBD1-205ENST00000353909 MAP3K6O95382 1288 aa16.3■□□□□ 0.2
MBD1-205ENST00000353909 ADCY1Q08828 1119 aa16.3■□□□□ 0.2
MBD1-205ENST00000353909 RNASEH2BQ5TBB1 312 aaKnown RBP16.3■□□□□ 0.2
MBD1-205ENST00000353909 ANKRD22Q5VYY1 191 aa16.3■□□□□ 0.2
MBD1-205ENST00000353909 MFSD5Q6N075 450 aa16.3■□□□□ 0.2
MBD1-205ENST00000353909 OLFML1Q6UWY5 402 aa16.3■□□□□ 0.2
MBD1-205ENST00000353909 XPO6Q96QU8 1125 aaKnown RBP16.3■□□□□ 0.2
MBD1-205ENST00000353909 CNPY3Q9BT09 278 aa16.3■□□□□ 0.2
MBD1-205ENST00000353909 NGRNQ9NPE2 291 aaKnown RBP16.3■□□□□ 0.2
MBD1-205ENST00000353909 TPX2Q9ULW0 747 aaKnown RBP16.3■□□□□ 0.2
MBD1-205ENST00000353909 ADORA2BP29275 332 aa16.3■□□□□ 0.2
MBD1-205ENST00000353909 CDH6P55285 790 aa16.3■□□□□ 0.2
MBD1-205ENST00000353909 ZC3H12AQ5D1E8 599 aaKnown RBP16.3■□□□□ 0.2
MBD1-205ENST00000353909 ERMARDQ5T6L9 678 aa16.3■□□□□ 0.2
MBD1-205ENST00000353909 SCYL2Q6P3W7 929 aa16.3■□□□□ 0.2
MBD1-205ENST00000353909 C10orf67Q8IYJ2 551 aa16.3■□□□□ 0.2
MBD1-205ENST00000353909 ATXN2LQ8WWM7 1075 aaKnown RBP16.3■□□□□ 0.2
MBD1-205ENST00000353909 ARHGEF2Q92974 986 aaKnown RBP16.3■□□□□ 0.2
MBD1-205ENST00000353909 ASNSD1Q9NWL6 643 aa16.3■□□□□ 0.2
MBD1-205ENST00000353909 RALGAPA2Q2PPJ7 1873 aa16.3■□□□□ 0.2
MBD1-205ENST00000353909 ATXN1P54253 815 aaKnown RBP16.29■□□□□ 0.2
MBD1-205ENST00000353909 LRRC14Q15048 493 aa16.29■□□□□ 0.2
MBD1-205ENST00000353909 FBXO47Q5MNV8 452 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms