RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 ATP6V0D2Q8N8Y2 350 aa14.28□□□□□ -0.12
SMC6-201ENST00000351948 HIPK4Q8NE63 616 aa14.28□□□□□ -0.12
SMC6-201ENST00000351948 DDI1Q8WTU0 396 aa14.28□□□□□ -0.12
SMC6-201ENST00000351948 TFB1MQ8WVM0 346 aaKnown RBP14.28□□□□□ -0.12
SMC6-201ENST00000351948 CYTH2Q99418 400 aa14.28□□□□□ -0.12
SMC6-201ENST00000351948 TMEM134Q9H6X4 195 aa14.28□□□□□ -0.12
SMC6-201ENST00000351948 PAK5Q9P286 719 aa14.28□□□□□ -0.12
SMC6-201ENST00000351948 MID2Q9UJV3 735 aa14.28□□□□□ -0.12
SMC6-201ENST00000351948 RGPD5Q99666 1765 aa14.27□□□□□ -0.12
SMC6-201ENST00000351948 USP17L7P0C7H9 530 aa14.27□□□□□ -0.12
SMC6-201ENST00000351948 CTCFP49711 727 aaPredicted RBP14.27□□□□□ -0.12
SMC6-201ENST00000351948 CSE1LP55060 971 aaKnown RBP14.27□□□□□ -0.12
SMC6-201ENST00000351948 KIF19Q2TAC6 998 aa14.27□□□□□ -0.12
SMC6-201ENST00000351948 PTPRN2Q92932 1015 aa14.27□□□□□ -0.12
SMC6-201ENST00000351948 C20orf96Q9NUD7 363 aaPredicted RBP14.27□□□□□ -0.12
SMC6-201ENST00000351948 DSEQ9UL01 958 aa14.27□□□□□ -0.12
SMC6-201ENST00000351948 TNFSF13BQ9Y275 285 aa14.27□□□□□ -0.12
SMC6-201ENST00000351948 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.27□□□□□ -0.13
SMC6-201ENST00000351948 A0A0G2JLL6 359 aaPredicted RBP14.27□□□□□ -0.13
SMC6-201ENST00000351948 RPL10AP62906 217 aaKnown RBP14.27□□□□□ -0.13
SMC6-201ENST00000351948 ZNF177Q13360 481 aaPredicted RBP14.27□□□□□ -0.13
SMC6-201ENST00000351948 CCL14Q16627 93 aa14.27□□□□□ -0.13
SMC6-201ENST00000351948 MIIPQ5JXC2 388 aa14.27□□□□□ -0.13
SMC6-201ENST00000351948 PRRT2Q7Z6L0 340 aaPredicted RBP14.27□□□□□ -0.13
SMC6-201ENST00000351948 NUDCD3Q8IVD9 361 aa14.27□□□□□ -0.13
SMC6-201ENST00000351948 ZNF669Q96BR6 464 aaPredicted RBP14.27□□□□□ -0.13
SMC6-201ENST00000351948 FAM136AQ96C01 138 aa14.27□□□□□ -0.13
SMC6-201ENST00000351948 ATP6V1G3Q96LB4 118 aa14.27□□□□□ -0.13
SMC6-201ENST00000351948 CACYBPQ9HB71 228 aaKnown RBP14.27□□□□□ -0.13
SMC6-201ENST00000351948 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.27□□□□□ -0.13
SMC6-201ENST00000351948 KANSL3Q9P2N6 904 aa14.27□□□□□ -0.13
SMC6-201ENST00000351948 SIK3Q9Y2K2 1263 aa14.27□□□□□ -0.13
SMC6-201ENST00000351948 CASZ1Q86V15 1759 aa14.27□□□□□ -0.13
SMC6-201ENST00000351948 TTLL13PA6NNM8 815 aa14.27□□□□□ -0.13
SMC6-201ENST00000351948 F5H5T6 163 aa14.27□□□□□ -0.13
SMC6-201ENST00000351948 DIAPH2O60879 1101 aa14.27□□□□□ -0.13
SMC6-201ENST00000351948 KLRC2P26717 231 aa14.27□□□□□ -0.13
SMC6-201ENST00000351948 TFDP3Q5H9I0 405 aa14.27□□□□□ -0.13
SMC6-201ENST00000351948 THEMIS2Q5TEJ8 643 aa14.27□□□□□ -0.13
SMC6-201ENST00000351948 PPTC7Q8NI37 304 aa14.27□□□□□ -0.13
SMC6-201ENST00000351948 ULK4Q96C45 1275 aa14.27□□□□□ -0.13
SMC6-201ENST00000351948 MAML3Q96JK9 1138 aa14.27□□□□□ -0.13
SMC6-201ENST00000351948 NUF2Q9BZD4 464 aa14.27□□□□□ -0.13
SMC6-201ENST00000351948 TOPAZ1Q8N9V7 1692 aa14.27□□□□□ -0.13
SMC6-201ENST00000351948 TSPAN3O60637 253 aa14.27□□□□□ -0.13
SMC6-201ENST00000351948 CHEK2O96017 543 aa14.27□□□□□ -0.13
SMC6-201ENST00000351948 ZBTB48P10074 688 aaPredicted RBP14.27□□□□□ -0.13
SMC6-201ENST00000351948 MAGEA4P43358 317 aa14.27□□□□□ -0.13
SMC6-201ENST00000351948 HIRAP54198 1017 aaPredicted RBP14.27□□□□□ -0.13
SMC6-201ENST00000351948 IL1RL1Q01638 556 aa14.27□□□□□ -0.13
SMC6-201ENST00000351948 ANGPTL8Q6UXH0 198 aa14.27□□□□□ -0.13
SMC6-201ENST00000351948 ZNF518BQ9C0D4 1074 aa14.27□□□□□ -0.13
SMC6-201ENST00000351948 BCAS3Q9H6U6 928 aa14.27□□□□□ -0.13
SMC6-201ENST00000351948 PIH1D1Q9NWS0 290 aaKnown RBP14.27□□□□□ -0.13
SMC6-201ENST00000351948 IGLV3-22A0A075B6J6 115 aa14.26□□□□□ -0.13
SMC6-201ENST00000351948 AXLP30530 894 aa14.26□□□□□ -0.13
SMC6-201ENST00000351948 NAA25Q14CX7 972 aa14.26□□□□□ -0.13
SMC6-201ENST00000351948 ARHGAP15Q53QZ3 475 aa14.26□□□□□ -0.13
SMC6-201ENST00000351948 TBC1D1Q86TI0 1168 aaPredicted RBP14.26□□□□□ -0.13
SMC6-201ENST00000351948 BLOC1S5Q8TDH9 187 aa14.26□□□□□ -0.13
SMC6-201ENST00000351948 SPATA17Q96L03 361 aa14.26□□□□□ -0.13
SMC6-201ENST00000351948 TRABDQ9H4I3 376 aa14.26□□□□□ -0.13
SMC6-201ENST00000351948 IGFLR1Q9H665 355 aa14.26□□□□□ -0.13
SMC6-201ENST00000351948 PCDHB5Q9Y5E4 795 aa14.26□□□□□ -0.13
SMC6-201ENST00000351948 SPTLC1O15269 473 aa14.26□□□□□ -0.13
SMC6-201ENST00000351948 ZNF862O60290 1169 aa14.26□□□□□ -0.13
SMC6-201ENST00000351948 AVPR1AP37288 418 aa14.26□□□□□ -0.13
SMC6-201ENST00000351948 KCNMA1Q12791 1236 aa14.26□□□□□ -0.13
SMC6-201ENST00000351948 NPY5RQ15761 445 aa14.26□□□□□ -0.13
SMC6-201ENST00000351948 WDR75Q8IWA0 830 aaKnown RBP14.26□□□□□ -0.13
SMC6-201ENST00000351948 TGS1Q96RS0 853 aaKnown RBP14.26□□□□□ -0.13
SMC6-201ENST00000351948 PSTPIP1O43586 416 aa14.26□□□□□ -0.13
SMC6-201ENST00000351948 SYF2O95926 243 aaKnown RBP14.26□□□□□ -0.13
SMC6-201ENST00000351948 RPLP2P05387 115 aaKnown RBP14.26□□□□□ -0.13
SMC6-201ENST00000351948 ASGR1P07306 291 aa14.26□□□□□ -0.13
SMC6-201ENST00000351948 SMPD1P17405 629 aa14.26□□□□□ -0.13
SMC6-201ENST00000351948 GRK4P32298 578 aa14.26□□□□□ -0.13
SMC6-201ENST00000351948 PRKCZQ05513 592 aa14.26□□□□□ -0.13
SMC6-201ENST00000351948 DAB2IPQ5VWQ8 1189 aa14.26□□□□□ -0.13
SMC6-201ENST00000351948 SZRD1Q7Z422 152 aa14.26□□□□□ -0.13
SMC6-201ENST00000351948 DEFB106AQ8N104 65 aa14.26□□□□□ -0.13
SMC6-201ENST00000351948 EXOC4Q96A65 974 aa14.26□□□□□ -0.13
SMC6-201ENST00000351948 PBXIP1Q96AQ6 731 aa14.26□□□□□ -0.13
SMC6-201ENST00000351948 PNKPQ96T60 521 aa14.26□□□□□ -0.13
SMC6-201ENST00000351948 TRIM55Q9BYV6 548 aa14.26□□□□□ -0.13
SMC6-201ENST00000351948 KCTD10Q9H3F6 313 aa14.26□□□□□ -0.13
SMC6-201ENST00000351948 PCMTD2Q9NV79 361 aa14.26□□□□□ -0.13
SMC6-201ENST00000351948 LSM8O95777 96 aaKnown RBP14.26□□□□□ -0.13
SMC6-201ENST00000351948 JCHAINP01591 159 aa14.26□□□□□ -0.13
SMC6-201ENST00000351948 HADHAP40939 763 aa14.26□□□□□ -0.13
SMC6-201ENST00000351948 CRHR2Q13324 411 aa14.26□□□□□ -0.13
SMC6-201ENST00000351948 ITGA7Q13683 1181 aa14.26□□□□□ -0.13
SMC6-201ENST00000351948 IKBKEQ14164 716 aa14.26□□□□□ -0.13
SMC6-201ENST00000351948 ZBTB41Q5SVQ8 909 aa14.26□□□□□ -0.13
SMC6-201ENST00000351948 SDHAF4Q5VUM1 108 aa14.26□□□□□ -0.13
SMC6-201ENST00000351948 DENND1BQ6P3S1 775 aa14.26□□□□□ -0.13
SMC6-201ENST00000351948 ARHGAP18Q8N392 663 aa14.26□□□□□ -0.13
SMC6-201ENST00000351948 C12orf29Q8N999 325 aa14.26□□□□□ -0.13
SMC6-201ENST00000351948 RAB3IPQ96QF0 476 aaPredicted RBP14.26□□□□□ -0.13
SMC6-201ENST00000351948 GGT7Q9UJ14 662 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 393.7 ms