RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 CST8O60676 142 aa17.52■□□□□ 0.39
SAMM50-201ENST00000350028 AKR1A1P14550 325 aa17.52■□□□□ 0.39
SAMM50-201ENST00000350028 PDGFRAP16234 1089 aa17.52■□□□□ 0.39
SAMM50-201ENST00000350028 AKAP5P24588 427 aa17.52■□□□□ 0.39
SAMM50-201ENST00000350028 ARSEP51690 589 aa17.52■□□□□ 0.39
SAMM50-201ENST00000350028 PURAQ00577 322 aaKnown RBP17.52■□□□□ 0.39
SAMM50-201ENST00000350028 SOWAHAQ2M3V2 549 aa17.52■□□□□ 0.39
SAMM50-201ENST00000350028 SMTNL2Q2TAL5 461 aa17.52■□□□□ 0.39
SAMM50-201ENST00000350028 KCNT1Q5JUK3 1230 aa17.52■□□□□ 0.39
SAMM50-201ENST00000350028 FBXO47Q5MNV8 452 aa17.52■□□□□ 0.39
SAMM50-201ENST00000350028 TMEM110Q86TL2 294 aa17.52■□□□□ 0.39
SAMM50-201ENST00000350028 ZDHHC17Q8IUH5 632 aa17.52■□□□□ 0.39
SAMM50-201ENST00000350028 ZCCHC9Q8N567 271 aaKnown RBP17.52■□□□□ 0.39
SAMM50-201ENST00000350028 UHMK1Q8TAS1 419 aaKnown RBP17.52■□□□□ 0.39
SAMM50-201ENST00000350028 SLC35F5Q8WV83 523 aa17.52■□□□□ 0.39
SAMM50-201ENST00000350028 RSAD1Q9HA92 442 aa17.52■□□□□ 0.39
SAMM50-201ENST00000350028 PCDH9Q9HC56 1237 aa17.52■□□□□ 0.39
SAMM50-201ENST00000350028 GDAP2Q9NXN4 497 aa17.52■□□□□ 0.39
SAMM50-201ENST00000350028 TPX2Q9ULW0 747 aaKnown RBP17.52■□□□□ 0.39
SAMM50-201ENST00000350028 ABT1Q9ULW3 272 aaKnown RBP17.52■□□□□ 0.39
SAMM50-201ENST00000350028 TRIP12Q14669 1992 aaPredicted RBP17.51■□□□□ 0.39
SAMM50-201ENST00000350028 A8MXQ7 604 aa17.51■□□□□ 0.39
SAMM50-201ENST00000350028 DUSP11O75319 330 aaKnown RBP17.51■□□□□ 0.39
SAMM50-201ENST00000350028 PLCB3Q01970 1234 aa17.51■□□□□ 0.39
SAMM50-201ENST00000350028 TNFAIP8L3Q5GJ75 292 aa17.51■□□□□ 0.39
SAMM50-201ENST00000350028 UBAP2Q5T6F2 1119 aaKnown RBP17.51■□□□□ 0.39
SAMM50-201ENST00000350028 TAF2Q6P1X5 1199 aa17.51■□□□□ 0.39
SAMM50-201ENST00000350028 SESTD1Q86VW0 696 aa17.51■□□□□ 0.39
SAMM50-201ENST00000350028 TTC30AQ86WT1 665 aa17.51■□□□□ 0.39
SAMM50-201ENST00000350028 CRYBG2Q8N1P7 616 aa17.51■□□□□ 0.39
SAMM50-201ENST00000350028 SERPINB12Q96P63 405 aa17.51■□□□□ 0.39
SAMM50-201ENST00000350028 DDX23Q9BUQ8 820 aaKnown RBP17.51■□□□□ 0.39
SAMM50-201ENST00000350028 NINJ2Q9NZG7 142 aa17.51■□□□□ 0.39
SAMM50-201ENST00000350028 RSPH14Q9UHP6 348 aa17.51■□□□□ 0.39
SAMM50-201ENST00000350028 DCDC2CA8MYV0 355 aa17.5■□□□□ 0.39
SAMM50-201ENST00000350028 KPNA7A9QM74 516 aa17.5■□□□□ 0.39
SAMM50-201ENST00000350028 TCEA3O75764 348 aa17.5■□□□□ 0.39
SAMM50-201ENST00000350028 CAPN15O75808 1086 aa17.5■□□□□ 0.39
SAMM50-201ENST00000350028 ENDOD1O94919 500 aa17.5■□□□□ 0.39
SAMM50-201ENST00000350028 DESP17661 470 aa17.5■□□□□ 0.39
SAMM50-201ENST00000350028 RGS7P49802 495 aa17.5■□□□□ 0.39
SAMM50-201ENST00000350028 TAF6P49848 677 aa17.5■□□□□ 0.39
SAMM50-201ENST00000350028 OTUD4Q01804 1114 aaKnown RBP17.5■□□□□ 0.39
SAMM50-201ENST00000350028 SLC6A3Q01959 620 aa17.5■□□□□ 0.39
SAMM50-201ENST00000350028 AUHQ13825 339 aaKnown RBP17.5■□□□□ 0.39
SAMM50-201ENST00000350028 SV2CQ496J9 727 aa17.5■□□□□ 0.39
SAMM50-201ENST00000350028 PMF1Q6P1K2 205 aa17.5■□□□□ 0.39
SAMM50-201ENST00000350028 RFX6Q8HWS3 928 aa17.5■□□□□ 0.39
SAMM50-201ENST00000350028 ACTL9Q8TC94 416 aa17.5■□□□□ 0.39
SAMM50-201ENST00000350028 EPS8L3Q8TE67 593 aaKnown RBP17.5■□□□□ 0.39
SAMM50-201ENST00000350028 CENPTQ96BT3 561 aa17.5■□□□□ 0.39
SAMM50-201ENST00000350028 HAUS1Q96CS2 278 aa17.5■□□□□ 0.39
SAMM50-201ENST00000350028 ADAM7Q9H2U9 754 aa17.5■□□□□ 0.39
SAMM50-201ENST00000350028 KLK14Q9P0G3 267 aa17.5■□□□□ 0.39
SAMM50-201ENST00000350028 NME7Q9Y5B8 376 aa17.5■□□□□ 0.39
SAMM50-201ENST00000350028 SMIM23A6NLE4 172 aa17.5■□□□□ 0.39
SAMM50-201ENST00000350028 SGK1O00141 431 aa17.5■□□□□ 0.39
SAMM50-201ENST00000350028 NDUFAB1O14561 156 aa17.5■□□□□ 0.39
SAMM50-201ENST00000350028 ACSL3O95573 720 aa17.5■□□□□ 0.39
SAMM50-201ENST00000350028 GNL1P36915 607 aaPredicted RBP17.5■□□□□ 0.39
SAMM50-201ENST00000350028 GPS1Q13098 491 aa17.5■□□□□ 0.39
SAMM50-201ENST00000350028 MORF4L2Q15014 288 aa17.5■□□□□ 0.39
SAMM50-201ENST00000350028 KYNUQ16719 465 aa17.5■□□□□ 0.39
SAMM50-201ENST00000350028 OLFML1Q6UWY5 402 aa17.5■□□□□ 0.39
SAMM50-201ENST00000350028 LIMS2Q7Z4I7 341 aa17.5■□□□□ 0.39
SAMM50-201ENST00000350028 PCGF5Q86SE9 256 aa17.5■□□□□ 0.39
SAMM50-201ENST00000350028 PRUNE1Q86TP1 453 aa17.5■□□□□ 0.39
SAMM50-201ENST00000350028 GLIS1Q8NBF1 620 aa17.5■□□□□ 0.39
SAMM50-201ENST00000350028 HSPH1Q92598 858 aa17.5■□□□□ 0.39
SAMM50-201ENST00000350028 SNX25Q9H3E2 840 aa17.5■□□□□ 0.39
SAMM50-201ENST00000350028 CYLDQ9NQC7 956 aa17.5■□□□□ 0.39
SAMM50-201ENST00000350028 FAM49BQ9NUQ9 324 aa17.5■□□□□ 0.39
SAMM50-201ENST00000350028 IPPQ9Y573 584 aa17.5■□□□□ 0.39
SAMM50-201ENST00000350028 CEP350Q5VT06 3117 aa17.49■□□□□ 0.39
SAMM50-201ENST00000350028 APOC4-APOC2K7ER74 178 aa17.49■□□□□ 0.39
SAMM50-201ENST00000350028 EBAG9O00559 213 aa17.49■□□□□ 0.39
SAMM50-201ENST00000350028 PRPSAP2O60256 369 aa17.49■□□□□ 0.39
SAMM50-201ENST00000350028 APOC2P02655 101 aa17.49■□□□□ 0.39
SAMM50-201ENST00000350028 FAM163BP0C2L3 166 aa17.49■□□□□ 0.39
SAMM50-201ENST00000350028 ZSCAN5DPP0CG00 497 aa17.49■□□□□ 0.39
SAMM50-201ENST00000350028 ATP5DP30049 168 aa17.49■□□□□ 0.39
SAMM50-201ENST00000350028 RDXP35241 583 aaKnown RBP17.49■□□□□ 0.39
SAMM50-201ENST00000350028 SCNN1AP37088 669 aa17.49■□□□□ 0.39
SAMM50-201ENST00000350028 MMP13P45452 471 aa17.49■□□□□ 0.39
SAMM50-201ENST00000350028 CCT5P48643 541 aa17.49■□□□□ 0.39
SAMM50-201ENST00000350028 DYNLT1P63172 113 aa17.49■□□□□ 0.39
SAMM50-201ENST00000350028 PDE4CQ08493 712 aa17.49■□□□□ 0.39
SAMM50-201ENST00000350028 BOLA3Q53S33 107 aa17.49■□□□□ 0.39
SAMM50-201ENST00000350028 CYP4F22Q6NT55 531 aa17.49■□□□□ 0.39
SAMM50-201ENST00000350028 TRNP1Q6NT89 227 aa17.49■□□□□ 0.39
SAMM50-201ENST00000350028 ANKRD52Q8NB46 1076 aa17.49■□□□□ 0.39
SAMM50-201ENST00000350028 SMG8Q8ND04 991 aaKnown RBP17.49■□□□□ 0.39
SAMM50-201ENST00000350028 HHIPL1Q96JK4 782 aa17.49■□□□□ 0.39
SAMM50-201ENST00000350028 PEBP4Q96S96 227 aa17.49■□□□□ 0.39
SAMM50-201ENST00000350028 CCDC77Q9BR77 488 aa17.49■□□□□ 0.39
SAMM50-201ENST00000350028 MTG1Q9BT17 334 aaPredicted RBP17.49■□□□□ 0.39
SAMM50-201ENST00000350028 TMEM121Q9BTD3 319 aa17.49■□□□□ 0.39
SAMM50-201ENST00000350028 MAK16Q9BXY0 300 aaKnown RBP17.49■□□□□ 0.39
SAMM50-201ENST00000350028 RNF39Q9H2S5 420 aa17.49■□□□□ 0.39
SAMM50-201ENST00000350028 PIK3R2O00459 728 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms