RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 IFT88Q13099 833 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 DUSP4Q13115 394 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 CRTC3Q6UUV7 619 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 RASGRP2Q7LDG7 609 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 THAP5Q7Z6K1 395 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 COLGALT2Q8IYK4 626 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 GALNT15Q8N3T1 639 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 MIPOL1Q8TD10 442 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 MCRS1Q96EZ8 462 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 UBXN6Q9BZV1 441 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 QTRT2Q9H974 415 aaKnown RBP6.24□□□□□ -1.41
RFC1-201ENST00000349703 GULP1Q9UBP9 304 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 HERC5Q9UII4 1024 aaKnown RBP6.24□□□□□ -1.41
RFC1-201ENST00000349703 STX8Q9UNK0 236 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 PCDHA5Q9Y5H7 936 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 SH3TC1Q8TE82 1336 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 DEPDC5O75140 1603 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 CAMSAP1Q5T5Y3 1602 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 ANKRD65E5RJM6 399 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 CASC3O15234 703 aaKnown RBP6.24□□□□□ -1.41
RFC1-201ENST00000349703 NDUFS2O75306 463 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 H2AFYO75367 372 aaKnown RBP6.24□□□□□ -1.41
RFC1-201ENST00000349703 RB1P06400 928 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 TFE3P19532 575 aaPredicted RBP6.24□□□□□ -1.41
RFC1-201ENST00000349703 CHRM3P20309 590 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 CD72P21854 359 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 ADH7P40394 386 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 TXKP42681 527 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 PMPCAQ10713 525 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 BEND3Q5T5X7 828 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 RESP18Q5W5W9 173 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 FAM124AQ86V42 546 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 SCFD2Q8WU76 684 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 IFT81Q8WYA0 676 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 RRP36Q96EU6 259 aaKnown RBP6.24□□□□□ -1.41
RFC1-201ENST00000349703 TMEM87BQ96K49 555 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 ZNF570Q96NI8 536 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 TAOK3Q9H2K8 898 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 GPRC5CQ9NQ84 441 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 STXBP5LQ9Y2K9 1186 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 CDHR2Q9BYE9 1310 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 RNF103-CHMP3A0A140T963 221 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 LRRC72A6NJI9 287 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 RNF103O00237 685 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 EML1O00423 815 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 ACADMP11310 421 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 DDX5P17844 614 aaKnown RBP6.24□□□□□ -1.41
RFC1-201ENST00000349703 CASP14P31944 242 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 WNT7BP56706 349 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 GTF2H3Q13889 308 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 UBXN11Q5T124 520 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 SLFN12LQ6IEE8 588 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 TTI2Q6NXR4 508 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 OSTM1Q86WC4 334 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 ARMC8Q8IUR7 673 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 TRIM42Q8IWZ5 723 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 WHAMMQ8TF30 809 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 OSBP2Q969R2 916 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 TSG101Q99816 390 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 CNOT10Q9H9A5 744 aaKnown RBP6.24□□□□□ -1.41
RFC1-201ENST00000349703 PIM2Q9P1W9 311 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 MAN1B1Q9UKM7 699 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 FPGT-TNNI3KV9GXZ4 949 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 ADGRB1O14514 1584 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 ITIH6Q6UXX5 1313 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 DDX39AO00148 427 aaKnown RBP6.24□□□□□ -1.41
RFC1-201ENST00000349703 SRGAP2O75044 1071 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 RAD51DO75771 328 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 CYP2C9P11712 490 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 AKR1B1P15121 316 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 SERPINB3P29508 390 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 CCT6AP40227 531 aaKnown RBP6.24□□□□□ -1.41
RFC1-201ENST00000349703 HNF4AP41235 474 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 CACNA2D1P54289 1103 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 POLE2P56282 527 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 STX17P56962 302 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 PRAMEP78395 509 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 DDR1Q08345 913 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 OCLNQ16625 522 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 MGAT5BQ3V5L5 792 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 VASNQ6EMK4 673 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 TRAPPC12Q8WVT3 735 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 ARHGEF2Q92974 986 aaKnown RBP6.24□□□□□ -1.41
RFC1-201ENST00000349703 SLC25A18Q9H1K4 315 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 ANKZF1Q9H8Y5 726 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 USP40Q9NVE5 1235 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 GTF3C4Q9UKN8 822 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 ABT1Q9ULW3 272 aaKnown RBP6.24□□□□□ -1.41
RFC1-201ENST00000349703 POLHQ9Y253 713 aa6.24□□□□□ -1.41
RFC1-201ENST00000349703 ZCCHC11Q5TAX3 1644 aaKnown RBP6.23□□□□□ -1.41
RFC1-201ENST00000349703 HECW2Q9P2P5 1572 aa6.23□□□□□ -1.41
RFC1-201ENST00000349703 MACROD2A1Z1Q3 448 aa6.23□□□□□ -1.41
RFC1-201ENST00000349703 C22orf46C9J442 243 aa6.23□□□□□ -1.41
RFC1-201ENST00000349703 ARIH2O95376 493 aa6.23□□□□□ -1.41
RFC1-201ENST00000349703 PLS3P13797 630 aa6.23□□□□□ -1.41
RFC1-201ENST00000349703 HSD3B1P14060 373 aa6.23□□□□□ -1.41
RFC1-201ENST00000349703 CD19P15391 556 aa6.23□□□□□ -1.41
RFC1-201ENST00000349703 CETN2P41208 172 aa6.23□□□□□ -1.41
RFC1-201ENST00000349703 BMXP51813 675 aa6.23□□□□□ -1.41
RFC1-201ENST00000349703 GSCP56915 257 aaPredicted RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms