RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 PPP1R12CQ9BZL4 782 aa16.62■□□□□ 0.25
HMGA1-202ENST00000347617 MORF4L1Q9UBU8 362 aa16.62■□□□□ 0.25
HMGA1-202ENST00000347617 SCINQ9Y6U3 715 aa16.62■□□□□ 0.25
HMGA1-202ENST00000347617 UTRNP46939 3433 aa16.62■□□□□ 0.25
HMGA1-202ENST00000347617 CFAP69A5D8W1 941 aa16.61■□□□□ 0.25
HMGA1-202ENST00000347617 LIASO43766 372 aa16.61■□□□□ 0.25
HMGA1-202ENST00000347617 STRNO43815 780 aa16.61■□□□□ 0.25
HMGA1-202ENST00000347617 ZNF862O60290 1169 aa16.61■□□□□ 0.25
HMGA1-202ENST00000347617 FKBP6O75344 327 aa16.61■□□□□ 0.25
HMGA1-202ENST00000347617 LYNP07948 512 aa16.61■□□□□ 0.25
HMGA1-202ENST00000347617 GSTT1P30711 240 aa16.61■□□□□ 0.25
HMGA1-202ENST00000347617 PTPN7P35236 360 aa16.61■□□□□ 0.25
HMGA1-202ENST00000347617 SERPINB4P48594 390 aa16.61■□□□□ 0.25
HMGA1-202ENST00000347617 NCKAP1LP55160 1127 aa16.61■□□□□ 0.25
HMGA1-202ENST00000347617 AP2B1P63010 937 aa16.61■□□□□ 0.25
HMGA1-202ENST00000347617 XIAPP98170 497 aa16.61■□□□□ 0.25
HMGA1-202ENST00000347617 DSG1Q02413 1049 aa16.61■□□□□ 0.25
HMGA1-202ENST00000347617 DNAL1Q4LDG9 190 aa16.61■□□□□ 0.25
HMGA1-202ENST00000347617 ST13P4Q8IZP2 240 aaPredicted RBP16.61■□□□□ 0.25
HMGA1-202ENST00000347617 ALLCQ8N6M5 410 aa16.61■□□□□ 0.25
HMGA1-202ENST00000347617 LZICQ8WZA0 190 aa16.61■□□□□ 0.25
HMGA1-202ENST00000347617 PWWP2AQ96N64 755 aa16.61■□□□□ 0.25
HMGA1-202ENST00000347617 EPAS1Q99814 870 aa16.61■□□□□ 0.25
HMGA1-202ENST00000347617 DHRS4Q9BTZ2 278 aa16.61■□□□□ 0.25
HMGA1-202ENST00000347617 FRMD8P1Q9BZ68 369 aaPredicted RBP16.61■□□□□ 0.25
HMGA1-202ENST00000347617 KANSL3Q9P2N6 904 aa16.61■□□□□ 0.25
HMGA1-202ENST00000347617 CHORDC1Q9UHD1 332 aaPredicted RBP16.61■□□□□ 0.25
HMGA1-202ENST00000347617 TMCO1Q9UM00 188 aa16.61■□□□□ 0.25
HMGA1-202ENST00000347617 WDR81Q562E7 1941 aa16.61■□□□□ 0.25
HMGA1-202ENST00000347617 ASB14A6NK59 587 aa16.61■□□□□ 0.25
HMGA1-202ENST00000347617 KLF11O14901 512 aa16.61■□□□□ 0.25
HMGA1-202ENST00000347617 MAP3K13O43283 966 aa16.61■□□□□ 0.25
HMGA1-202ENST00000347617 PIM1P11309 404 aaPredicted RBP16.61■□□□□ 0.25
HMGA1-202ENST00000347617 PGM1P36871 562 aa16.61■□□□□ 0.25
HMGA1-202ENST00000347617 CLCN2P51788 898 aa16.61■□□□□ 0.25
HMGA1-202ENST00000347617 MAPK6Q16659 721 aa16.61■□□□□ 0.25
HMGA1-202ENST00000347617 FOXB2Q5VYV0 432 aa16.61■□□□□ 0.25
HMGA1-202ENST00000347617 AAGABQ6PD74 315 aa16.61■□□□□ 0.25
HMGA1-202ENST00000347617 METTL7BQ6UX53 244 aa16.61■□□□□ 0.25
HMGA1-202ENST00000347617 NME8Q8N427 588 aa16.61■□□□□ 0.25
HMGA1-202ENST00000347617 FBXL13Q8NEE6 735 aa16.61■□□□□ 0.25
HMGA1-202ENST00000347617 KAT5Q92993 513 aa16.61■□□□□ 0.25
HMGA1-202ENST00000347617 HERPUD2Q9BSE4 406 aa16.61■□□□□ 0.25
HMGA1-202ENST00000347617 MAK16Q9BXY0 300 aaKnown RBP16.61■□□□□ 0.25
HMGA1-202ENST00000347617 NIFKQ9BYG3 293 aaKnown RBP16.61■□□□□ 0.25
HMGA1-202ENST00000347617 ZWILCHQ9H900 591 aa16.61■□□□□ 0.25
HMGA1-202ENST00000347617 RRAGCQ9HB90 399 aa16.61■□□□□ 0.25
HMGA1-202ENST00000347617 PCDH9Q9HC56 1237 aa16.61■□□□□ 0.25
HMGA1-202ENST00000347617 TAS2R1Q9NYW7 299 aa16.61■□□□□ 0.25
HMGA1-202ENST00000347617 ATXN10Q9UBB4 475 aa16.61■□□□□ 0.25
HMGA1-202ENST00000347617 H0YCG3 227 aa16.6■□□□□ 0.25
HMGA1-202ENST00000347617 PDHXO00330 501 aa16.6■□□□□ 0.25
HMGA1-202ENST00000347617 KRT4P19013 534 aa16.6■□□□□ 0.25
HMGA1-202ENST00000347617 CRABP2P29373 138 aa16.6■□□□□ 0.25
HMGA1-202ENST00000347617 CDK7P50613 346 aa16.6■□□□□ 0.25
HMGA1-202ENST00000347617 SPRYD7Q5W111 196 aa16.6■□□□□ 0.25
HMGA1-202ENST00000347617 CCDC60Q8IWA6 550 aaPredicted RBP16.6■□□□□ 0.25
HMGA1-202ENST00000347617 BANPQ8N9N5 519 aa16.6■□□□□ 0.25
HMGA1-202ENST00000347617 CEP170P1Q96L14 293 aa16.6■□□□□ 0.25
HMGA1-202ENST00000347617 HAPLN3Q96S86 360 aa16.6■□□□□ 0.25
HMGA1-202ENST00000347617 SPATA16Q9BXB7 569 aa16.6■□□□□ 0.25
HMGA1-202ENST00000347617 KRT82Q9NSB4 513 aa16.6■□□□□ 0.25
HMGA1-202ENST00000347617 PCMTD2Q9NV79 361 aa16.6■□□□□ 0.25
HMGA1-202ENST00000347617 ZDHHC7Q9NXF8 308 aa16.6■□□□□ 0.25
HMGA1-202ENST00000347617 CCL15-CCL14A0A0B4J2E2 113 aa16.59■□□□□ 0.25
HMGA1-202ENST00000347617 PEX10O60683 326 aa16.59■□□□□ 0.25
HMGA1-202ENST00000347617 CSDE1O75534 798 aaKnown RBP16.59■□□□□ 0.25
HMGA1-202ENST00000347617 FARP2O94887 1054 aaPredicted RBP16.59■□□□□ 0.25
HMGA1-202ENST00000347617 DHRS4L1P0CG22 281 aa16.59■□□□□ 0.25
HMGA1-202ENST00000347617 UBA1P22314 1058 aaKnown RBP16.59■□□□□ 0.25
HMGA1-202ENST00000347617 NSFP46459 744 aaKnown RBP16.59■□□□□ 0.25
HMGA1-202ENST00000347617 FSTL1Q12841 308 aa16.59■□□□□ 0.25
HMGA1-202ENST00000347617 HNRNPDQ14103 355 aaKnown RBP16.59■□□□□ 0.25
HMGA1-202ENST00000347617 CCL15Q16663 113 aa16.59■□□□□ 0.25
HMGA1-202ENST00000347617 WDR72Q3MJ13 1102 aa16.59■□□□□ 0.25
HMGA1-202ENST00000347617 PLEKHG4Q58EX7 1191 aa16.59■□□□□ 0.25
HMGA1-202ENST00000347617 SH2D4BQ5SQS7 431 aa16.59■□□□□ 0.25
HMGA1-202ENST00000347617 RNASEH2BQ5TBB1 312 aaKnown RBP16.59■□□□□ 0.25
HMGA1-202ENST00000347617 TMCO4Q5TGY1 634 aa16.59■□□□□ 0.25
HMGA1-202ENST00000347617 RASIP1Q5U651 963 aa16.59■□□□□ 0.25
HMGA1-202ENST00000347617 LRRC38Q5VT99 294 aa16.59■□□□□ 0.25
HMGA1-202ENST00000347617 ZNF467Q7Z7K2 595 aaPredicted RBP16.59■□□□□ 0.25
HMGA1-202ENST00000347617 ZNF276Q8N554 614 aa16.59■□□□□ 0.25
HMGA1-202ENST00000347617 RFWD2Q8NHY2 731 aa16.59■□□□□ 0.25
HMGA1-202ENST00000347617 SEPT1Q8WYJ6 367 aa16.59■□□□□ 0.25
HMGA1-202ENST00000347617 TMEM120AQ9BXJ8 343 aa16.59■□□□□ 0.25
HMGA1-202ENST00000347617 EPB41L1Q9H4G0 881 aa16.59■□□□□ 0.25
HMGA1-202ENST00000347617 PCIF1Q9H4Z3 704 aa16.59■□□□□ 0.25
HMGA1-202ENST00000347617 ACSS3Q9H6R3 686 aa16.59■□□□□ 0.25
HMGA1-202ENST00000347617 ZNF302Q9NR11 478 aa16.59■□□□□ 0.25
HMGA1-202ENST00000347617 CYP26B1Q9NR63 512 aa16.59■□□□□ 0.25
HMGA1-202ENST00000347617 NDE1Q9NXR1 346 aa16.59■□□□□ 0.25
HMGA1-202ENST00000347617 PCDHB2Q9Y5E7 798 aa16.59■□□□□ 0.25
HMGA1-202ENST00000347617 BTBD19C9JJ37 291 aa16.59■□□□□ 0.25
HMGA1-202ENST00000347617 UPP2O95045 317 aa16.59■□□□□ 0.25
HMGA1-202ENST00000347617 ITGAVP06756 1048 aa16.59■□□□□ 0.25
HMGA1-202ENST00000347617 ANPEPP15144 967 aa16.59■□□□□ 0.25
HMGA1-202ENST00000347617 ADRA1DP25100 572 aa16.59■□□□□ 0.25
HMGA1-202ENST00000347617 ARSEP51690 589 aa16.59■□□□□ 0.25
HMGA1-202ENST00000347617 PRKCEQ02156 737 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms