RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 PHF13Q86YI8 300 aaPredicted RBP20.08■□□□□ 0.8
CHMP4A-201ENST00000347519 FUBP3Q96I24 572 aaKnown RBP eCLIP20.08■□□□□ 0.8
CHMP4A-201ENST00000347519 C11orf70Q9BRQ4 267 aa20.08■□□□□ 0.8
CHMP4A-201ENST00000347519 AFF4Q9UHB7 1163 aaKnown RBP20.08■□□□□ 0.8
CHMP4A-201ENST00000347519 SSX2IPQ9Y2D8 614 aa20.08■□□□□ 0.8
CHMP4A-201ENST00000347519 CEP83Q9Y592 693 aa20.08■□□□□ 0.8
CHMP4A-201ENST00000347519 ATP8B3O60423 1300 aa20.07■□□□□ 0.8
CHMP4A-201ENST00000347519 F8VP50 259 aa20.07■□□□□ 0.8
CHMP4A-201ENST00000347519 XPO1O14980 1071 aaKnown RBP20.07■□□□□ 0.8
CHMP4A-201ENST00000347519 LPXNO60711 386 aa20.07■□□□□ 0.8
CHMP4A-201ENST00000347519 ERBB2P04626 1255 aa20.07■□□□□ 0.8
CHMP4A-201ENST00000347519 SETSIPP0DME0 302 aa20.07■□□□□ 0.8
CHMP4A-201ENST00000347519 HAPLN1P10915 354 aaPredicted RBP20.07■□□□□ 0.8
CHMP4A-201ENST00000347519 ABCB4P21439 1286 aa20.07■□□□□ 0.8
CHMP4A-201ENST00000347519 MMP8P22894 467 aa20.07■□□□□ 0.8
CHMP4A-201ENST00000347519 NSFP46459 744 aaKnown RBP20.07■□□□□ 0.8
CHMP4A-201ENST00000347519 CYP4A22Q5TCH4 519 aa20.07■□□□□ 0.8
CHMP4A-201ENST00000347519 GPR153Q6NV75 609 aa20.07■□□□□ 0.8
CHMP4A-201ENST00000347519 MCOLN2Q8IZK6 566 aa20.07■□□□□ 0.8
CHMP4A-201ENST00000347519 STKLD1Q8NE28 680 aa20.07■□□□□ 0.8
CHMP4A-201ENST00000347519 ZNF461Q8TAF7 563 aa20.07■□□□□ 0.8
CHMP4A-201ENST00000347519 MICAL1Q8TDZ2 1067 aa20.07■□□□□ 0.8
CHMP4A-201ENST00000347519 ARHGEF26Q96DR7 871 aa20.07■□□□□ 0.8
CHMP4A-201ENST00000347519 SLC4A5Q9BY07 1137 aa20.07■□□□□ 0.8
CHMP4A-201ENST00000347519 LACRTQ9GZZ8 138 aa20.07■□□□□ 0.8
CHMP4A-201ENST00000347519 NGRNQ9NPE2 291 aaKnown RBP20.07■□□□□ 0.8
CHMP4A-201ENST00000347519 CHORDC1Q9UHD1 332 aaPredicted RBP20.07■□□□□ 0.8
CHMP4A-201ENST00000347519 PPP2R2CQ9Y2T4 447 aa20.07■□□□□ 0.8
CHMP4A-201ENST00000347519 GREB1Q4ZG55 1949 aa20.06■□□□□ 0.8
CHMP4A-201ENST00000347519 USP27XA6NNY8 438 aa20.06■□□□□ 0.8
CHMP4A-201ENST00000347519 ATMINO43313 823 aaPredicted RBP20.06■□□□□ 0.8
CHMP4A-201ENST00000347519 H2AFZP0C0S5 128 aa20.06■□□□□ 0.8
CHMP4A-201ENST00000347519 SPATA31D3P0C874 917 aa20.06■□□□□ 0.8
CHMP4A-201ENST00000347519 MAGEA11P43364 429 aa20.06■□□□□ 0.8
CHMP4A-201ENST00000347519 PLA2G4AP47712 749 aa20.06■□□□□ 0.8
CHMP4A-201ENST00000347519 RPL34P49207 117 aaKnown RBP20.06■□□□□ 0.8
CHMP4A-201ENST00000347519 CREMQ03060 361 aa20.06■□□□□ 0.8
CHMP4A-201ENST00000347519 DDR2Q16832 855 aa20.06■□□□□ 0.8
CHMP4A-201ENST00000347519 LILRA6Q6PI73 481 aa20.06■□□□□ 0.8
CHMP4A-201ENST00000347519 SPATA31D4Q6ZUB0 917 aa20.06■□□□□ 0.8
CHMP4A-201ENST00000347519 H2AFVQ71UI9 128 aa20.06■□□□□ 0.8
CHMP4A-201ENST00000347519 ADGRD2Q7Z7M1 963 aa20.06■□□□□ 0.8
CHMP4A-201ENST00000347519 ERICH1Q86X53 443 aa20.06■□□□□ 0.8
CHMP4A-201ENST00000347519 SCN4BQ8IWT1 228 aa20.06■□□□□ 0.8
CHMP4A-201ENST00000347519 SPPL2BQ8TCT7 592 aa20.06■□□□□ 0.8
CHMP4A-201ENST00000347519 PPP1R13BQ96KQ4 1090 aa20.06■□□□□ 0.8
CHMP4A-201ENST00000347519 THAP2Q9H0W7 228 aa20.06■□□□□ 0.8
CHMP4A-201ENST00000347519 ABCB6Q9NP58 842 aa20.06■□□□□ 0.8
CHMP4A-201ENST00000347519 DMAP1Q9NPF5 467 aaPredicted RBP20.06■□□□□ 0.8
CHMP4A-201ENST00000347519 ADAM22Q9P0K1 906 aa20.06■□□□□ 0.8
CHMP4A-201ENST00000347519 TRIM10Q9UDY6 481 aa20.06■□□□□ 0.8
CHMP4A-201ENST00000347519 ZKSCAN5Q9Y2L8 839 aa20.06■□□□□ 0.8
CHMP4A-201ENST00000347519 MTCL1Q9Y4B5 1905 aaKnown RBP20.05■□□□□ 0.8
CHMP4A-201ENST00000347519 E5RJQ4 531 aa20.05■□□□□ 0.8
CHMP4A-201ENST00000347519 SOX1O00570 391 aaPredicted RBP20.05■□□□□ 0.8
CHMP4A-201ENST00000347519 TGM5O43548 720 aa20.05■□□□□ 0.8
CHMP4A-201ENST00000347519 GRIK1P39086 918 aa20.05■□□□□ 0.8
CHMP4A-201ENST00000347519 ARHGAP25P42331 645 aa20.05■□□□□ 0.8
CHMP4A-201ENST00000347519 VAV2P52735 878 aa20.05■□□□□ 0.8
CHMP4A-201ENST00000347519 KRT83P78385 493 aa20.05■□□□□ 0.8
CHMP4A-201ENST00000347519 SMARCB1Q12824 385 aa20.05■□□□□ 0.8
CHMP4A-201ENST00000347519 TPGS2Q68CL5 300 aa20.05■□□□□ 0.8
CHMP4A-201ENST00000347519 REXO1L1PQ8IX06 675 aa20.05■□□□□ 0.8
CHMP4A-201ENST00000347519 KIAA1524Q8TCG1 905 aa20.05■□□□□ 0.8
CHMP4A-201ENST00000347519 STK32AQ8WU08 396 aa20.05■□□□□ 0.8
CHMP4A-201ENST00000347519 C2orf15Q8WU43 125 aaKnown RBP20.05■□□□□ 0.8
CHMP4A-201ENST00000347519 ST7Q9NRC1 585 aa20.05■□□□□ 0.8
CHMP4A-201ENST00000347519 TRMT1Q9NXH9 659 aaKnown RBP20.05■□□□□ 0.8
CHMP4A-201ENST00000347519 ANKRD62A6NC57 917 aa20.04■□□□□ 0.8
CHMP4A-201ENST00000347519 CLASP2O75122 1294 aaKnown RBP20.04■□□□□ 0.8
CHMP4A-201ENST00000347519 GJB6O95452 261 aa20.04■□□□□ 0.8
CHMP4A-201ENST00000347519 CCDC175P0C221 793 aa20.04■□□□□ 0.8
CHMP4A-201ENST00000347519 LCP1P13796 627 aa20.04■□□□□ 0.8
CHMP4A-201ENST00000347519 ATF2P15336 505 aa20.04■□□□□ 0.8
CHMP4A-201ENST00000347519 RRM1P23921 792 aa20.04■□□□□ 0.8
CHMP4A-201ENST00000347519 KLRC2P26717 231 aa20.04■□□□□ 0.8
CHMP4A-201ENST00000347519 GABRB2P47870 512 aa20.04■□□□□ 0.8
CHMP4A-201ENST00000347519 C1QBPQ07021 282 aaKnown RBP20.04■□□□□ 0.8
CHMP4A-201ENST00000347519 MGAT5BQ3V5L5 792 aa20.04■□□□□ 0.8
CHMP4A-201ENST00000347519 C10orf76Q5T2E6 689 aa20.04■□□□□ 0.8
CHMP4A-201ENST00000347519 VSTM1Q6UX27 236 aa20.04■□□□□ 0.8
CHMP4A-201ENST00000347519 KIAA1328Q86T90 577 aa20.04■□□□□ 0.8
CHMP4A-201ENST00000347519 TMEM110Q86TL2 294 aa20.04■□□□□ 0.8
CHMP4A-201ENST00000347519 GPR152Q8TDT2 470 aa20.04■□□□□ 0.8
CHMP4A-201ENST00000347519 NDRG1Q92597 394 aaKnown RBP20.04■□□□□ 0.8
CHMP4A-201ENST00000347519 SEPT5Q99719 369 aaPredicted RBP20.04■□□□□ 0.8
CHMP4A-201ENST00000347519 EMILIN2Q9BXX0 1053 aa20.04■□□□□ 0.8
CHMP4A-201ENST00000347519 LMAN2LQ9H0V9 348 aa20.04■□□□□ 0.8
CHMP4A-201ENST00000347519 ZNF576Q9H609 170 aa20.04■□□□□ 0.8
CHMP4A-201ENST00000347519 DUSP10Q9Y6W6 482 aa20.04■□□□□ 0.8
CHMP4A-201ENST00000347519 MYO9BQ13459 2157 aa20.03■□□□□ 0.8
CHMP4A-201ENST00000347519 TNFRSF10BO14763 440 aa20.03■□□□□ 0.8
CHMP4A-201ENST00000347519 PER2O15055 1255 aa20.03■□□□□ 0.8
CHMP4A-201ENST00000347519 PJA2O43164 708 aa20.03■□□□□ 0.8
CHMP4A-201ENST00000347519 IPO7O95373 1038 aaKnown RBP20.03■□□□□ 0.8
CHMP4A-201ENST00000347519 ADH1AP07327 375 aa20.03■□□□□ 0.8
CHMP4A-201ENST00000347519 TMEM253P0C7T8 217 aa20.03■□□□□ 0.8
CHMP4A-201ENST00000347519 ATF6P18850 670 aa20.03■□□□□ 0.8
CHMP4A-201ENST00000347519 FAM183BPQ6ZVS7 135 aa20.03■□□□□ 0.8
CHMP4A-201ENST00000347519 XYLT1Q86Y38 959 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms