RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 HCSTQ9UBK5 93 aa11.57□□□□□ -0.56
ECM1-201ENST00000346569 PRG3Q9Y2Y8 225 aaPredicted RBP11.57□□□□□ -0.56
ECM1-201ENST00000346569 F8VP50 259 aa11.56□□□□□ -0.56
ECM1-201ENST00000346569 SPOPO43791 374 aa11.56□□□□□ -0.56
ECM1-201ENST00000346569 CEP104O60308 925 aa11.56□□□□□ -0.56
ECM1-201ENST00000346569 EFCAB14O75071 495 aa11.56□□□□□ -0.56
ECM1-201ENST00000346569 UPP2O95045 317 aa11.56□□□□□ -0.56
ECM1-201ENST00000346569 NPR3P17342 541 aa11.56□□□□□ -0.56
ECM1-201ENST00000346569 FGFR3P22607 806 aa11.56□□□□□ -0.56
ECM1-201ENST00000346569 MARCKSL1P49006 195 aa11.56□□□□□ -0.56
ECM1-201ENST00000346569 DNA2P51530 1060 aa11.56□□□□□ -0.56
ECM1-201ENST00000346569 ACAP1Q15027 740 aa11.56□□□□□ -0.56
ECM1-201ENST00000346569 RAB41Q5JT25 222 aa11.56□□□□□ -0.56
ECM1-201ENST00000346569 CC2D1AQ6P1N0 951 aaPredicted RBP11.56□□□□□ -0.56
ECM1-201ENST00000346569 ARCQ7LC44 396 aa11.56□□□□□ -0.56
ECM1-201ENST00000346569 PIGZQ86VD9 579 aa11.56□□□□□ -0.56
ECM1-201ENST00000346569 MMGT1Q8N4V1 131 aa11.56□□□□□ -0.56
ECM1-201ENST00000346569 UBL4BQ8N7F7 174 aa11.56□□□□□ -0.56
ECM1-201ENST00000346569 ZMIZ2Q8NF64 920 aa11.56□□□□□ -0.56
ECM1-201ENST00000346569 OR10T2Q8NGX3 314 aa11.56□□□□□ -0.56
ECM1-201ENST00000346569 PIWIL1Q96J94 861 aaKnown RBP11.56□□□□□ -0.56
ECM1-201ENST00000346569 GPR62Q9BZJ7 368 aa11.56□□□□□ -0.56
ECM1-201ENST00000346569 SYNCQ9H7C4 482 aa11.56□□□□□ -0.56
ECM1-201ENST00000346569 RC3H2Q9HBD1 1191 aaKnown RBP11.56□□□□□ -0.56
ECM1-201ENST00000346569 TMEM30AQ9NV96 361 aa11.56□□□□□ -0.56
ECM1-201ENST00000346569 SMARCAL1Q9NZC9 954 aa11.56□□□□□ -0.56
ECM1-201ENST00000346569 C2CD4BA6NLJ0 364 aa11.55□□□□□ -0.56
ECM1-201ENST00000346569 HHLA1C9JL84 531 aa11.55□□□□□ -0.56
ECM1-201ENST00000346569 PIK3R2O00459 728 aa11.55□□□□□ -0.56
ECM1-201ENST00000346569 DYNC1I1O14576 645 aa11.55□□□□□ -0.56
ECM1-201ENST00000346569 TBC1D4O60343 1298 aa11.55□□□□□ -0.56
ECM1-201ENST00000346569 PYGMP11217 842 aa11.55□□□□□ -0.56
ECM1-201ENST00000346569 BCAR1P56945 870 aa11.55□□□□□ -0.56
ECM1-201ENST00000346569 RWDD2BP57060 319 aa11.55□□□□□ -0.56
ECM1-201ENST00000346569 TAS2R40P59535 323 aa11.55□□□□□ -0.56
ECM1-201ENST00000346569 YWHAHQ04917 246 aaPredicted RBP11.55□□□□□ -0.56
ECM1-201ENST00000346569 TAF5Q15542 800 aa11.55□□□□□ -0.56
ECM1-201ENST00000346569 MAPRE1Q15691 268 aaKnown RBP11.55□□□□□ -0.56
ECM1-201ENST00000346569 FAM102AQ5T9C2 384 aaPredicted RBP11.55□□□□□ -0.56
ECM1-201ENST00000346569 LRRC38Q5VT99 294 aa11.55□□□□□ -0.56
ECM1-201ENST00000346569 TRNP1Q6NT89 227 aa11.55□□□□□ -0.56
ECM1-201ENST00000346569 SLC26A9Q7LBE3 791 aa11.55□□□□□ -0.56
ECM1-201ENST00000346569 FAM35AQ86V20 835 aa11.55□□□□□ -0.56
ECM1-201ENST00000346569 EMC1Q8N766 993 aa11.55□□□□□ -0.56
ECM1-201ENST00000346569 NOA1Q8NC60 698 aaKnown RBP11.55□□□□□ -0.56
ECM1-201ENST00000346569 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.55□□□□□ -0.56
ECM1-201ENST00000346569 UBXN4Q92575 508 aa11.55□□□□□ -0.56
ECM1-201ENST00000346569 GOLGA1Q92805 767 aa11.55□□□□□ -0.56
ECM1-201ENST00000346569 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.55□□□□□ -0.56
ECM1-201ENST00000346569 MED10Q9BTT4 135 aa11.55□□□□□ -0.56
ECM1-201ENST00000346569 ZCWPW1Q9H0M4 648 aa11.55□□□□□ -0.56
ECM1-201ENST00000346569 IL23AQ9NPF7 189 aa11.55□□□□□ -0.56
ECM1-201ENST00000346569 PRDM5Q9NQX1 630 aaPredicted RBP11.55□□□□□ -0.56
ECM1-201ENST00000346569 METTL5Q9NRN9 209 aaKnown RBP11.55□□□□□ -0.56
ECM1-201ENST00000346569 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.55□□□□□ -0.56
ECM1-201ENST00000346569 V9GYY5 206 aaPredicted RBP11.55□□□□□ -0.56
ECM1-201ENST00000346569 MICAL3Q7RTP6 2002 aa11.55□□□□□ -0.56
ECM1-201ENST00000346569 NT5C1B-RDH14C9J2C7 533 aa11.54□□□□□ -0.56
ECM1-201ENST00000346569 PSTPIP1O43586 416 aa11.54□□□□□ -0.56
ECM1-201ENST00000346569 AP1G2O75843 785 aa11.54□□□□□ -0.56
ECM1-201ENST00000346569 SLC34A2O95436 690 aa11.54□□□□□ -0.56
ECM1-201ENST00000346569 FAM200BP0CF97 657 aa11.54□□□□□ -0.56
ECM1-201ENST00000346569 ACRP10323 421 aa11.54□□□□□ -0.56
ECM1-201ENST00000346569 FLT3P36888 993 aa11.54□□□□□ -0.56
ECM1-201ENST00000346569 ZNF143P52747 638 aaPredicted RBP11.54□□□□□ -0.56
ECM1-201ENST00000346569 CACNA2D1P54289 1103 aa11.54□□□□□ -0.56
ECM1-201ENST00000346569 MAP3K7CLP57077 242 aa11.54□□□□□ -0.56
ECM1-201ENST00000346569 SLC8A3P57103 927 aa11.54□□□□□ -0.56
ECM1-201ENST00000346569 RNASE9P60153 205 aaKnown RBP11.54□□□□□ -0.56
ECM1-201ENST00000346569 WDR5P61964 334 aaKnown RBP11.54□□□□□ -0.56
ECM1-201ENST00000346569 DEFB103AP81534 67 aa11.54□□□□□ -0.56
ECM1-201ENST00000346569 ADCY1Q08828 1119 aa11.54□□□□□ -0.56
ECM1-201ENST00000346569 VARS2Q5ST30 1063 aaKnown RBP11.54□□□□□ -0.56
ECM1-201ENST00000346569 CCDC181Q5TID7 509 aa11.54□□□□□ -0.56
ECM1-201ENST00000346569 DAB2IPQ5VWQ8 1189 aa11.54□□□□□ -0.56
ECM1-201ENST00000346569 FUT10Q6P4F1 479 aa11.54□□□□□ -0.56
ECM1-201ENST00000346569 TAS1R1Q7RTX1 841 aa11.54□□□□□ -0.56
ECM1-201ENST00000346569 RHOT1Q8IXI2 618 aa11.54□□□□□ -0.56
ECM1-201ENST00000346569 LRRC43Q8N309 656 aa11.54□□□□□ -0.56
ECM1-201ENST00000346569 BCL7CQ8WUZ0 217 aaPredicted RBP11.54□□□□□ -0.56
ECM1-201ENST00000346569 RXFP2Q8WXD0 754 aa11.54□□□□□ -0.56
ECM1-201ENST00000346569 MYLPFQ96A32 169 aa11.54□□□□□ -0.56
ECM1-201ENST00000346569 KCNK16Q96T55 309 aa11.54□□□□□ -0.56
ECM1-201ENST00000346569 FNDC1Q4ZHG4 1894 aaPredicted RBP11.54□□□□□ -0.56
ECM1-201ENST00000346569 PGRMC1O00264 195 aaKnown RBP11.53□□□□□ -0.56
ECM1-201ENST00000346569 DPYSL4O14531 572 aa11.53□□□□□ -0.56
ECM1-201ENST00000346569 FSCN2O14926 492 aa11.53□□□□□ -0.56
ECM1-201ENST00000346569 LRCH4O75427 683 aa11.53□□□□□ -0.56
ECM1-201ENST00000346569 BAIAP3O94812 1187 aa11.53□□□□□ -0.56
ECM1-201ENST00000346569 AMHP03971 560 aa11.53□□□□□ -0.56
ECM1-201ENST00000346569 LCP1P13796 627 aa11.53□□□□□ -0.56
ECM1-201ENST00000346569 TCF4P15884 667 aa11.53□□□□□ -0.56
ECM1-201ENST00000346569 PDGFRAP16234 1089 aa11.53□□□□□ -0.56
ECM1-201ENST00000346569 BDNFP23560 247 aa11.53□□□□□ -0.56
ECM1-201ENST00000346569 PSMA2P25787 234 aa11.53□□□□□ -0.56
ECM1-201ENST00000346569 NDUFV1P49821 464 aa11.53□□□□□ -0.56
ECM1-201ENST00000346569 MRPS5P82675 430 aaKnown RBP11.53□□□□□ -0.56
ECM1-201ENST00000346569 TSPY1Q01534 308 aa11.53□□□□□ -0.56
ECM1-201ENST00000346569 ELAVL2Q12926 359 aaKnown RBP11.53□□□□□ -0.56
ECM1-201ENST00000346569 ZNF211Q13398 564 aaPredicted RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms