RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 ELMO3Q96BJ8 720 aa16.74■□□□□ 0.27
TSPAN4-201ENST00000346501 MSANTD3Q96H12 275 aa16.74■□□□□ 0.27
TSPAN4-201ENST00000346501 SRRTQ9BXP5 876 aaKnown RBP16.74■□□□□ 0.27
TSPAN4-201ENST00000346501 SLC46A2Q9BY10 475 aa16.74■□□□□ 0.27
TSPAN4-201ENST00000346501 SDCBP2Q9H190 292 aa16.74■□□□□ 0.27
TSPAN4-201ENST00000346501 RAPGEFL1Q9UHV5 662 aa16.74■□□□□ 0.27
TSPAN4-201ENST00000346501 CLDN5O00501 218 aa16.73■□□□□ 0.27
TSPAN4-201ENST00000346501 P4HA2O15460 535 aa16.73■□□□□ 0.27
TSPAN4-201ENST00000346501 FAM200BP0CF97 657 aa16.73■□□□□ 0.27
TSPAN4-201ENST00000346501 TBXAS1P24557 533 aaPredicted RBP16.73■□□□□ 0.27
TSPAN4-201ENST00000346501 KPNA1P52294 538 aaPredicted RBP16.73■□□□□ 0.27
TSPAN4-201ENST00000346501 IFRD2Q12894 506 aaPredicted RBP16.73■□□□□ 0.27
TSPAN4-201ENST00000346501 TXNDC8Q6A555 127 aa16.73■□□□□ 0.27
TSPAN4-201ENST00000346501 CREBRFQ8IUR6 639 aa16.73■□□□□ 0.27
TSPAN4-201ENST00000346501 SLC2A14Q8TDB8 520 aa16.73■□□□□ 0.27
TSPAN4-201ENST00000346501 SLC35C1Q96A29 364 aa16.73■□□□□ 0.27
TSPAN4-201ENST00000346501 CYFIP2Q96F07 1278 aa16.73■□□□□ 0.27
TSPAN4-201ENST00000346501 APOBEC3GQ9HC16 384 aaKnown RBP16.73■□□□□ 0.27
TSPAN4-201ENST00000346501 HEBP1Q9NRV9 189 aa16.73■□□□□ 0.27
TSPAN4-201ENST00000346501 KRT82Q9NSB4 513 aa16.73■□□□□ 0.27
TSPAN4-201ENST00000346501 FAM49BQ9NUQ9 324 aa16.73■□□□□ 0.27
TSPAN4-201ENST00000346501 COMMD8Q9NX08 183 aa16.73■□□□□ 0.27
TSPAN4-201ENST00000346501 RWDD2AQ9UIY3 292 aa16.73■□□□□ 0.27
TSPAN4-201ENST00000346501 COQ4Q9Y3A0 265 aa16.73■□□□□ 0.27
TSPAN4-201ENST00000346501 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.73■□□□□ 0.27
TSPAN4-201ENST00000346501 GALR2O43603 387 aaPredicted RBP16.72■□□□□ 0.27
TSPAN4-201ENST00000346501 CILPO75339 1184 aa16.72■□□□□ 0.27
TSPAN4-201ENST00000346501 NPR3P17342 541 aa16.72■□□□□ 0.27
TSPAN4-201ENST00000346501 HDCP19113 662 aa16.72■□□□□ 0.27
TSPAN4-201ENST00000346501 BMP6P22004 513 aa16.72■□□□□ 0.27
TSPAN4-201ENST00000346501 MAGEA9P43362 315 aa16.72■□□□□ 0.27
TSPAN4-201ENST00000346501 FMO5P49326 533 aa16.72■□□□□ 0.27
TSPAN4-201ENST00000346501 AMPD2Q01433 879 aa16.72■□□□□ 0.27
TSPAN4-201ENST00000346501 FCHO2Q0JRZ9 810 aa16.72■□□□□ 0.27
TSPAN4-201ENST00000346501 CBWD6Q4V339 395 aa16.72■□□□□ 0.27
TSPAN4-201ENST00000346501 CBWD3Q5JTY5 395 aa16.72■□□□□ 0.27
TSPAN4-201ENST00000346501 CBWD5Q5RIA9 395 aa16.72■□□□□ 0.27
TSPAN4-201ENST00000346501 CWF19L1Q69YN2 538 aaKnown RBP16.72■□□□□ 0.27
TSPAN4-201ENST00000346501 GPIHBP1Q8IV16 184 aa16.72■□□□□ 0.27
TSPAN4-201ENST00000346501 TMEM105Q8N8V8 129 aa16.72■□□□□ 0.27
TSPAN4-201ENST00000346501 TTC16Q8NEE8 873 aa16.72■□□□□ 0.27
TSPAN4-201ENST00000346501 OVCA2Q8WZ82 227 aa16.72■□□□□ 0.27
TSPAN4-201ENST00000346501 FBXO32Q969P5 355 aa16.72■□□□□ 0.27
TSPAN4-201ENST00000346501 EXOC4Q96A65 974 aa16.72■□□□□ 0.27
TSPAN4-201ENST00000346501 HEXIM2Q96MH2 286 aaKnown RBP16.72■□□□□ 0.27
TSPAN4-201ENST00000346501 NT5C1BQ96P26 610 aa16.72■□□□□ 0.27
TSPAN4-201ENST00000346501 DUSP9Q99956 384 aaKnown RBP16.72■□□□□ 0.27
TSPAN4-201ENST00000346501 TTLL2Q9BWV7 592 aa16.72■□□□□ 0.27
TSPAN4-201ENST00000346501 OSBPL6Q9BZF3 934 aa16.72■□□□□ 0.27
TSPAN4-201ENST00000346501 FBXO44Q9H4M3 255 aa16.72■□□□□ 0.27
TSPAN4-201ENST00000346501 C8orf33Q9H7E9 229 aaPredicted RBP16.72■□□□□ 0.27
TSPAN4-201ENST00000346501 NME7Q9Y5B8 376 aa16.72■□□□□ 0.27
TSPAN4-201ENST00000346501 FAM170BA6NMN3 283 aa16.71■□□□□ 0.27
TSPAN4-201ENST00000346501 NRG2O14511 850 aaPredicted RBP16.71■□□□□ 0.27
TSPAN4-201ENST00000346501 PMM2O15305 246 aa16.71■□□□□ 0.27
TSPAN4-201ENST00000346501 PRAMEF12O95522 483 aa16.71■□□□□ 0.27
TSPAN4-201ENST00000346501 CCDC130P13994 396 aa16.71■□□□□ 0.27
TSPAN4-201ENST00000346501 ADORA2BP29275 332 aa16.71■□□□□ 0.27
TSPAN4-201ENST00000346501 MLLT6P55198 1093 aaPredicted RBP16.71■□□□□ 0.27
TSPAN4-201ENST00000346501 TAF10Q12962 218 aa16.71■□□□□ 0.27
TSPAN4-201ENST00000346501 ORC1Q13415 861 aa16.71■□□□□ 0.27
TSPAN4-201ENST00000346501 ZNF268Q14587 947 aaPredicted RBP16.71■□□□□ 0.27
TSPAN4-201ENST00000346501 ZNF394Q53GI3 561 aa16.71■□□□□ 0.27
TSPAN4-201ENST00000346501 POTEHQ6S545 545 aa16.71■□□□□ 0.27
TSPAN4-201ENST00000346501 TMEM150AQ86TG1 271 aa16.71■□□□□ 0.27
TSPAN4-201ENST00000346501 FAM114A1Q8IWE2 563 aa16.71■□□□□ 0.27
TSPAN4-201ENST00000346501 FUKQ8N0W3 1084 aa16.71■□□□□ 0.27
TSPAN4-201ENST00000346501 PJA1Q8NG27 643 aa16.71■□□□□ 0.27
TSPAN4-201ENST00000346501 SEMA4DQ92854 862 aa16.71■□□□□ 0.27
TSPAN4-201ENST00000346501 HNRNPABQ99729 332 aaKnown RBP16.71■□□□□ 0.27
TSPAN4-201ENST00000346501 CISHQ9NSE2 258 aa16.71■□□□□ 0.27
TSPAN4-201ENST00000346501 PIAS3Q9Y6X2 628 aa16.71■□□□□ 0.27
TSPAN4-201ENST00000346501 AFPP02771 609 aaKnown RBP16.7■□□□□ 0.26
TSPAN4-201ENST00000346501 MAP3K7CLP57077 242 aa16.7■□□□□ 0.26
TSPAN4-201ENST00000346501 CUL2Q13617 745 aa16.7■□□□□ 0.26
TSPAN4-201ENST00000346501 IER5LQ5T953 404 aa16.7■□□□□ 0.26
TSPAN4-201ENST00000346501 ARL14EPQ8N8R7 260 aaPredicted RBP16.7■□□□□ 0.26
TSPAN4-201ENST00000346501 C12orf29Q8N999 325 aa16.7■□□□□ 0.26
TSPAN4-201ENST00000346501 DTWD2Q8NBA8 298 aa16.7■□□□□ 0.26
TSPAN4-201ENST00000346501 FAM3CQ92520 227 aa16.7■□□□□ 0.26
TSPAN4-201ENST00000346501 TMEM176AQ96HP8 235 aa16.7■□□□□ 0.26
TSPAN4-201ENST00000346501 KCNK16Q96T55 309 aa16.7■□□□□ 0.26
TSPAN4-201ENST00000346501 NACA2Q9H009 215 aa16.7■□□□□ 0.26
TSPAN4-201ENST00000346501 SMG9Q9H0W8 520 aaKnown RBP16.7■□□□□ 0.26
TSPAN4-201ENST00000346501 LTB4R2Q9NPC1 389 aa16.7■□□□□ 0.26
TSPAN4-201ENST00000346501 HMGXB4Q9UGU5 601 aa16.7■□□□□ 0.26
TSPAN4-201ENST00000346501 PLA2G5P39877 138 aa16.69■□□□□ 0.26
TSPAN4-201ENST00000346501 SLC5A3P53794 718 aa16.69■□□□□ 0.26
TSPAN4-201ENST00000346501 MARSP56192 900 aaKnown RBP16.69■□□□□ 0.26
TSPAN4-201ENST00000346501 KCNH2Q12809 1159 aa16.69■□□□□ 0.26
TSPAN4-201ENST00000346501 LRMPQ12912 555 aa16.69■□□□□ 0.26
TSPAN4-201ENST00000346501 NR1H3Q13133 447 aa16.69■□□□□ 0.26
TSPAN4-201ENST00000346501 PDGFRLQ15198 375 aa16.69■□□□□ 0.26
TSPAN4-201ENST00000346501 ITPRIPL2Q3MIP1 535 aa16.69■□□□□ 0.26
TSPAN4-201ENST00000346501 RALGPS2Q86X27 583 aaPredicted RBP16.69■□□□□ 0.26
TSPAN4-201ENST00000346501 DDX42Q86XP3 938 aaKnown RBP eCLIP16.69■□□□□ 0.26
TSPAN4-201ENST00000346501 TRIM59Q8IWR1 403 aa16.69■□□□□ 0.26
TSPAN4-201ENST00000346501 CCDC105Q8IYK2 499 aa16.69■□□□□ 0.26
TSPAN4-201ENST00000346501 USP13Q92995 863 aaPredicted RBP16.69■□□□□ 0.26
TSPAN4-201ENST00000346501 TATDN2Q93075 761 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms