RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 KCNK16Q96T55 309 aa17.11■□□□□ 0.33
RAB5C-201ENST00000346213 SNX25Q9H3E2 840 aa17.11■□□□□ 0.33
RAB5C-201ENST00000346213 KCNF1Q9H3M0 494 aa17.11■□□□□ 0.33
RAB5C-201ENST00000346213 ZFP14Q9HCL3 533 aa17.11■□□□□ 0.33
RAB5C-201ENST00000346213 FAM86C1Q9NVL1 165 aa17.11■□□□□ 0.33
RAB5C-201ENST00000346213 RWDD2AQ9UIY3 292 aa17.11■□□□□ 0.33
RAB5C-201ENST00000346213 GREB1Q4ZG55 1949 aa17.11■□□□□ 0.33
RAB5C-201ENST00000346213 C2orf78A6NCI8 922 aa17.1■□□□□ 0.33
RAB5C-201ENST00000346213 SERPINC1P01008 464 aa17.1■□□□□ 0.33
RAB5C-201ENST00000346213 CCNE1P24864 410 aa17.1■□□□□ 0.33
RAB5C-201ENST00000346213 PLA2G5P39877 138 aa17.1■□□□□ 0.33
RAB5C-201ENST00000346213 SOX9P48436 509 aa17.1■□□□□ 0.33
RAB5C-201ENST00000346213 AP3M2P53677 418 aa17.1■□□□□ 0.33
RAB5C-201ENST00000346213 NOP14P78316 857 aaKnown RBP17.1■□□□□ 0.33
RAB5C-201ENST00000346213 FZD5Q13467 585 aa17.1■□□□□ 0.33
RAB5C-201ENST00000346213 VEPH1Q14D04 833 aa17.1■□□□□ 0.33
RAB5C-201ENST00000346213 GLIPR1L2Q4G1C9 344 aa17.1■□□□□ 0.33
RAB5C-201ENST00000346213 SLC44A4Q53GD3 710 aa17.1■□□□□ 0.33
RAB5C-201ENST00000346213 KLHL10Q6JEL2 608 aa17.1■□□□□ 0.33
RAB5C-201ENST00000346213 ITIH5Q86UX2 942 aa17.1■□□□□ 0.33
RAB5C-201ENST00000346213 CCDC105Q8IYK2 499 aa17.1■□□□□ 0.33
RAB5C-201ENST00000346213 FUKQ8N0W3 1084 aa17.1■□□□□ 0.33
RAB5C-201ENST00000346213 SLC35C1Q96A29 364 aa17.1■□□□□ 0.33
RAB5C-201ENST00000346213 CYP2S1Q96SQ9 504 aa17.1■□□□□ 0.33
RAB5C-201ENST00000346213 MFSD1Q9H3U5 465 aa17.1■□□□□ 0.33
RAB5C-201ENST00000346213 TMEM8AQ9HCN3 771 aa17.1■□□□□ 0.33
RAB5C-201ENST00000346213 CTNND2Q9UQB3 1225 aa17.1■□□□□ 0.33
RAB5C-201ENST00000346213 NUP210Q8TEM1 1887 aaPredicted RBP17.1■□□□□ 0.33
RAB5C-201ENST00000346213 KIF20AO95235 890 aa17.1■□□□□ 0.33
RAB5C-201ENST00000346213 GDI1P31150 447 aa17.1■□□□□ 0.33
RAB5C-201ENST00000346213 STX17P56962 302 aa17.1■□□□□ 0.33
RAB5C-201ENST00000346213 STARD6P59095 220 aa17.1■□□□□ 0.33
RAB5C-201ENST00000346213 TNK2Q07912 1038 aa17.1■□□□□ 0.33
RAB5C-201ENST00000346213 PAK1Q13153 545 aa17.1■□□□□ 0.33
RAB5C-201ENST00000346213 MLF2Q15773 248 aaPredicted RBP17.1■□□□□ 0.33
RAB5C-201ENST00000346213 FAM35AQ86V20 835 aa17.1■□□□□ 0.33
RAB5C-201ENST00000346213 MAB21L3Q8N8X9 362 aa17.1■□□□□ 0.33
RAB5C-201ENST00000346213 TTC8Q8TAM2 541 aa17.1■□□□□ 0.33
RAB5C-201ENST00000346213 USP13Q92995 863 aaPredicted RBP17.1■□□□□ 0.33
RAB5C-201ENST00000346213 TATDN2Q93075 761 aa17.1■□□□□ 0.33
RAB5C-201ENST00000346213 TRMT2BQ96GJ1 504 aaKnown RBP17.1■□□□□ 0.33
RAB5C-201ENST00000346213 ELOVL4Q9GZR5 314 aa17.1■□□□□ 0.33
RAB5C-201ENST00000346213 TASP1Q9H6P5 420 aa17.1■□□□□ 0.33
RAB5C-201ENST00000346213 SAMSN1Q9NSI8 373 aaKnown RBP17.1■□□□□ 0.33
RAB5C-201ENST00000346213 MAGEC2Q9UBF1 373 aaPredicted RBP17.1■□□□□ 0.33
RAB5C-201ENST00000346213 TICRRQ7Z2Z1 1910 aa17.1■□□□□ 0.33
RAB5C-201ENST00000346213 DENND4CQ5VZ89 1909 aa17.09■□□□□ 0.33
RAB5C-201ENST00000346213 OTOL1A6NHN0 477 aaPredicted RBP17.09■□□□□ 0.33
RAB5C-201ENST00000346213 CDK11BP21127 795 aaKnown RBP17.09■□□□□ 0.33
RAB5C-201ENST00000346213 TARSP26639 723 aaKnown RBP17.09■□□□□ 0.33
RAB5C-201ENST00000346213 PPP1R2P41236 205 aa17.09■□□□□ 0.33
RAB5C-201ENST00000346213 CLCN5P51795 746 aa17.09■□□□□ 0.33
RAB5C-201ENST00000346213 FCHO2Q0JRZ9 810 aa17.09■□□□□ 0.33
RAB5C-201ENST00000346213 SGSM1Q2NKQ1 1148 aa17.09■□□□□ 0.33
RAB5C-201ENST00000346213 CDKAL1Q5VV42 579 aa17.09■□□□□ 0.33
RAB5C-201ENST00000346213 GPRIN1Q7Z2K8 1008 aa17.09■□□□□ 0.33
RAB5C-201ENST00000346213 MFSD6LQ8IWD5 586 aa17.09■□□□□ 0.33
RAB5C-201ENST00000346213 SMOQ99835 787 aa17.09■□□□□ 0.33
RAB5C-201ENST00000346213 RTN4Q9NQC3 1192 aaKnown RBP17.09■□□□□ 0.33
RAB5C-201ENST00000346213 FAM49BQ9NUQ9 324 aa17.09■□□□□ 0.33
RAB5C-201ENST00000346213 R3HCC1Q9Y3T6 440 aaKnown RBP17.09■□□□□ 0.33
RAB5C-201ENST00000346213 H0Y858 1186 aa17.08■□□□□ 0.32
RAB5C-201ENST00000346213 FAM163BP0C2L3 166 aa17.08■□□□□ 0.32
RAB5C-201ENST00000346213 CSH1P0DML2 217 aa17.08■□□□□ 0.32
RAB5C-201ENST00000346213 CSH2P0DML3 217 aa17.08■□□□□ 0.32
RAB5C-201ENST00000346213 PSMC3P17980 439 aa17.08■□□□□ 0.32
RAB5C-201ENST00000346213 RPL13P26373 211 aaKnown RBP17.08■□□□□ 0.32
RAB5C-201ENST00000346213 GSDMDP57764 484 aa17.08■□□□□ 0.32
RAB5C-201ENST00000346213 INCA1Q0VD86 236 aa17.08■□□□□ 0.32
RAB5C-201ENST00000346213 STIM1Q13586 685 aa17.08■□□□□ 0.32
RAB5C-201ENST00000346213 NAIF1Q69YI7 327 aaPredicted RBP17.08■□□□□ 0.32
RAB5C-201ENST00000346213 TXNDC11Q6PKC3 985 aa17.08■□□□□ 0.32
RAB5C-201ENST00000346213 TPRG1Q6ZUI0 275 aa17.08■□□□□ 0.32
RAB5C-201ENST00000346213 CMTM8Q8IZV2 173 aa17.08■□□□□ 0.32
RAB5C-201ENST00000346213 PJA1Q8NG27 643 aa17.08■□□□□ 0.32
RAB5C-201ENST00000346213 SCAMP5Q8TAC9 235 aa17.08■□□□□ 0.32
RAB5C-201ENST00000346213 NELFBQ8WX92 580 aa17.08■□□□□ 0.32
RAB5C-201ENST00000346213 SPATA17Q96L03 361 aa17.08■□□□□ 0.32
RAB5C-201ENST00000346213 TRMT61BQ9BVS5 477 aaKnown RBP17.08■□□□□ 0.32
RAB5C-201ENST00000346213 GCNT4Q9P109 453 aa17.08■□□□□ 0.32
RAB5C-201ENST00000346213 TNFRSF10BO14763 440 aa17.07■□□□□ 0.32
RAB5C-201ENST00000346213 CETN3O15182 167 aa17.07■□□□□ 0.32
RAB5C-201ENST00000346213 SLC16A3O15427 465 aaKnown RBP17.07■□□□□ 0.32
RAB5C-201ENST00000346213 GALR2O43603 387 aaPredicted RBP17.07■□□□□ 0.32
RAB5C-201ENST00000346213 KRT13P13646 458 aa17.07■□□□□ 0.32
RAB5C-201ENST00000346213 CD58P19256 250 aa17.07■□□□□ 0.32
RAB5C-201ENST00000346213 CDC25CP30307 473 aa17.07■□□□□ 0.32
RAB5C-201ENST00000346213 HOXC13P31276 330 aa17.07■□□□□ 0.32
RAB5C-201ENST00000346213 GRIK1P39086 918 aa17.07■□□□□ 0.32
RAB5C-201ENST00000346213 MXI1P50539 228 aa17.07■□□□□ 0.32
RAB5C-201ENST00000346213 RPL10AP62906 217 aaKnown RBP17.07■□□□□ 0.32
RAB5C-201ENST00000346213 ENPEPQ07075 957 aa17.07■□□□□ 0.32
RAB5C-201ENST00000346213 DCAF17Q5H9S7 520 aaPredicted RBP17.07■□□□□ 0.32
RAB5C-201ENST00000346213 TRIM68Q6AZZ1 485 aa17.07■□□□□ 0.32
RAB5C-201ENST00000346213 PHLDB3Q6NSJ2 640 aa17.07■□□□□ 0.32
RAB5C-201ENST00000346213 VSTM1Q6UX27 236 aa17.07■□□□□ 0.32
RAB5C-201ENST00000346213 C4orf50Q6ZRC1 276 aa17.07■□□□□ 0.32
RAB5C-201ENST00000346213 NAP1L5Q96NT1 182 aaPredicted RBP17.07■□□□□ 0.32
RAB5C-201ENST00000346213 TTLL2Q9BWV7 592 aa17.07■□□□□ 0.32
RAB5C-201ENST00000346213 ARIH1Q9Y4X5 557 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms