RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 AJAP1Q9UKB5 411 aaPredicted RBP22.04■■□□□ 1.12
SMARCB1-202ENST00000344921 TSPAN16Q9UKR8 245 aa22.04■■□□□ 1.12
SMARCB1-202ENST00000344921 NOTCH4Q99466 2003 aa22.04■■□□□ 1.12
SMARCB1-202ENST00000344921 CEBPBP17676 345 aa22.03■■□□□ 1.12
SMARCB1-202ENST00000344921 RFX1P22670 979 aa22.03■■□□□ 1.12
SMARCB1-202ENST00000344921 CLEC20AQ6ZU45 233 aa22.03■■□□□ 1.12
SMARCB1-202ENST00000344921 GJD3Q8N144 294 aa22.03■■□□□ 1.12
SMARCB1-202ENST00000344921 NUP93Q8N1F7 819 aa22.03■■□□□ 1.12
SMARCB1-202ENST00000344921 NEK11Q8NG66 645 aa22.03■■□□□ 1.12
SMARCB1-202ENST00000344921 SHC3Q92529 594 aa22.03■■□□□ 1.12
SMARCB1-202ENST00000344921 MCRS1Q96EZ8 462 aa22.03■■□□□ 1.12
SMARCB1-202ENST00000344921 ERGIC2Q96RQ1 377 aa22.03■■□□□ 1.12
SMARCB1-202ENST00000344921 DUSP16Q9BY84 665 aa22.03■■□□□ 1.12
SMARCB1-202ENST00000344921 CDH7Q9ULB5 785 aa22.03■■□□□ 1.12
SMARCB1-202ENST00000344921 CNTN6Q9UQ52 1028 aa22.03■■□□□ 1.12
SMARCB1-202ENST00000344921 LOC730098B7Z3J9 87 aa22.03■■□□□ 1.12
SMARCB1-202ENST00000344921 TEX33O43247 280 aa22.03■■□□□ 1.12
SMARCB1-202ENST00000344921 NOL4O94818 638 aa22.03■■□□□ 1.12
SMARCB1-202ENST00000344921 CALCAP01258 141 aa22.03■■□□□ 1.12
SMARCB1-202ENST00000344921 NPR3P17342 541 aa22.03■■□□□ 1.12
SMARCB1-202ENST00000344921 BRD2P25440 801 aaKnown RBP22.03■■□□□ 1.12
SMARCB1-202ENST00000344921 CDC25CP30307 473 aa22.03■■□□□ 1.12
SMARCB1-202ENST00000344921 FANCCQ00597 558 aa22.03■■□□□ 1.12
SMARCB1-202ENST00000344921 DRAP1Q14919 205 aaPredicted RBP22.03■■□□□ 1.12
SMARCB1-202ENST00000344921 GOLGA7BQ2TAP0 167 aa22.03■■□□□ 1.12
SMARCB1-202ENST00000344921 DPY19L2P1Q6NXN4 242 aa22.03■■□□□ 1.12
SMARCB1-202ENST00000344921 GAREM2Q75VX8 874 aa22.03■■□□□ 1.12
SMARCB1-202ENST00000344921 NAP1L5Q96NT1 182 aaPredicted RBP22.03■■□□□ 1.12
SMARCB1-202ENST00000344921 CSNK1G1Q9HCP0 422 aa22.03■■□□□ 1.12
SMARCB1-202ENST00000344921 SIK3Q9Y2K2 1263 aa22.03■■□□□ 1.12
SMARCB1-202ENST00000344921 FOXN3O00409 490 aaPredicted RBP22.02■■□□□ 1.12
SMARCB1-202ENST00000344921 LAMP2P13473 410 aa22.02■■□□□ 1.12
SMARCB1-202ENST00000344921 ZNF132P52740 706 aa22.02■■□□□ 1.12
SMARCB1-202ENST00000344921 POLR2FP61218 127 aaKnown RBP22.02■■□□□ 1.12
SMARCB1-202ENST00000344921 TEAD2Q15562 447 aa22.02■■□□□ 1.12
SMARCB1-202ENST00000344921 ARHGAP15Q53QZ3 475 aa22.02■■□□□ 1.12
SMARCB1-202ENST00000344921 NPAS3Q8IXF0 933 aa22.02■■□□□ 1.12
SMARCB1-202ENST00000344921 ANKRD52Q8NB46 1076 aa22.02■■□□□ 1.12
SMARCB1-202ENST00000344921 ZMIZ2Q8NF64 920 aa22.02■■□□□ 1.12
SMARCB1-202ENST00000344921 SHKBP1Q8TBC3 707 aa22.02■■□□□ 1.12
SMARCB1-202ENST00000344921 TFAP2BQ92481 460 aa22.02■■□□□ 1.12
SMARCB1-202ENST00000344921 TRMT2BQ96GJ1 504 aaKnown RBP22.02■■□□□ 1.12
SMARCB1-202ENST00000344921 LIMD1Q9UGP4 676 aa22.02■■□□□ 1.12
SMARCB1-202ENST00000344921 ZFP37Q9Y6Q3 630 aaPredicted RBP22.02■■□□□ 1.12
SMARCB1-202ENST00000344921 A0A1B0GTH6 734 aa22.01■■□□□ 1.11
SMARCB1-202ENST00000344921 MICAL2O94851 1124 aa22.01■■□□□ 1.11
SMARCB1-202ENST00000344921 RTN3O95197 1032 aaPredicted RBP22.01■■□□□ 1.11
SMARCB1-202ENST00000344921 GNA15P30679 374 aa22.01■■□□□ 1.11
SMARCB1-202ENST00000344921 SLC5A3P53794 718 aa22.01■■□□□ 1.11
SMARCB1-202ENST00000344921 UBASH3AP57075 661 aa22.01■■□□□ 1.11
SMARCB1-202ENST00000344921 USP46P62068 366 aa22.01■■□□□ 1.11
SMARCB1-202ENST00000344921 STILQ15468 1287 aa22.01■■□□□ 1.11
SMARCB1-202ENST00000344921 MYRFLQ96LU7 910 aa22.01■■□□□ 1.11
SMARCB1-202ENST00000344921 NLRC4Q9NPP4 1024 aa22.01■■□□□ 1.11
SMARCB1-202ENST00000344921 C19orf67A6NJJ6 358 aa22■■□□□ 1.11
SMARCB1-202ENST00000344921 O00370 1275 aa22■■□□□ 1.11
SMARCB1-202ENST00000344921 CYP26A1O43174 497 aa22■■□□□ 1.11
SMARCB1-202ENST00000344921 THAP12O43422 761 aa22■■□□□ 1.11
SMARCB1-202ENST00000344921 PNMA6AP0CW24 399 aaPredicted RBP22■■□□□ 1.11
SMARCB1-202ENST00000344921 BCAT1P54687 386 aa22■■□□□ 1.11
SMARCB1-202ENST00000344921 PTK2Q05397 1052 aa22■■□□□ 1.11
SMARCB1-202ENST00000344921 PTPN21Q16825 1174 aa22■■□□□ 1.11
SMARCB1-202ENST00000344921 UBA3Q8TBC4 463 aa22■■□□□ 1.11
SMARCB1-202ENST00000344921 STK33Q9BYT3 514 aa22■■□□□ 1.11
SMARCB1-202ENST00000344921 GANQ9H2C0 597 aa22■■□□□ 1.11
SMARCB1-202ENST00000344921 IL21Q9HBE4 155 aa22■■□□□ 1.11
SMARCB1-202ENST00000344921 GDE1Q9NZC3 331 aa22■■□□□ 1.11
SMARCB1-202ENST00000344921 MED7O43513 233 aa22■■□□□ 1.11
SMARCB1-202ENST00000344921 MOSPD3O75425 235 aa22■■□□□ 1.11
SMARCB1-202ENST00000344921 YWHAQP27348 245 aa22■■□□□ 1.11
SMARCB1-202ENST00000344921 CYP4F8P98187 520 aa22■■□□□ 1.11
SMARCB1-202ENST00000344921 CNGA2Q16280 664 aa22■■□□□ 1.11
SMARCB1-202ENST00000344921 LCLAT1Q6UWP7 414 aa22■■□□□ 1.11
SMARCB1-202ENST00000344921 TTC30AQ86WT1 665 aa22■■□□□ 1.11
SMARCB1-202ENST00000344921 ZDHHC14Q8IZN3 488 aa22■■□□□ 1.11
SMARCB1-202ENST00000344921 SCAMP5Q8TAC9 235 aa22■■□□□ 1.11
SMARCB1-202ENST00000344921 MRPS31Q92665 395 aaKnown RBP22■■□□□ 1.11
SMARCB1-202ENST00000344921 SLITRK1Q96PX8 696 aa22■■□□□ 1.11
SMARCB1-202ENST00000344921 SPAG5Q96R06 1193 aa22■■□□□ 1.11
SMARCB1-202ENST00000344921 NAA15Q9BXJ9 866 aaKnown RBP22■■□□□ 1.11
SMARCB1-202ENST00000344921 ACP6Q9NPH0 428 aa22■■□□□ 1.11
SMARCB1-202ENST00000344921 GREB1Q4ZG55 1949 aa22■■□□□ 1.11
SMARCB1-202ENST00000344921 M0QYV0 167 aa21.99■■□□□ 1.11
SMARCB1-202ENST00000344921 NRG2O14511 850 aaPredicted RBP21.99■■□□□ 1.11
SMARCB1-202ENST00000344921 EPHB6O15197 1021 aa21.99■■□□□ 1.11
SMARCB1-202ENST00000344921 F11P03951 625 aa21.99■■□□□ 1.11
SMARCB1-202ENST00000344921 BST2Q10589 180 aaKnown RBP21.99■■□□□ 1.11
SMARCB1-202ENST00000344921 NR1I3Q14994 352 aa21.99■■□□□ 1.11
SMARCB1-202ENST00000344921 GPR158Q5T848 1215 aa21.99■■□□□ 1.11
SMARCB1-202ENST00000344921 ST13P5Q8NFI4 369 aaPredicted RBP21.99■■□□□ 1.11
SMARCB1-202ENST00000344921 ZNF606Q8WXB4 792 aa21.99■■□□□ 1.11
SMARCB1-202ENST00000344921 FBXO32Q969P5 355 aa21.99■■□□□ 1.11
SMARCB1-202ENST00000344921 GPR88Q9GZN0 384 aa21.99■■□□□ 1.11
SMARCB1-202ENST00000344921 CD320Q9NPF0 282 aa21.99■■□□□ 1.11
SMARCB1-202ENST00000344921 EPS15L1Q9UBC2 864 aa21.99■■□□□ 1.11
SMARCB1-202ENST00000344921 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.99■■□□□ 1.11
SMARCB1-202ENST00000344921 DAAM1Q9Y4D1 1078 aa21.99■■□□□ 1.11
SMARCB1-202ENST00000344921 TNFRSF10BO14763 440 aa21.98■■□□□ 1.11
SMARCB1-202ENST00000344921 ABL1P00519 1130 aa21.98■■□□□ 1.11
SMARCB1-202ENST00000344921 PDE4CQ08493 712 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms