RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 ACOT1Q86TX2 421 aa17.08■□□□□ 0.32
ATG4B-201ENST00000344376 FAM35AQ86V20 835 aa17.08■□□□□ 0.32
ATG4B-201ENST00000344376 ZC3H3Q8IXZ2 948 aaKnown RBP17.08■□□□□ 0.32
ATG4B-201ENST00000344376 FBXL13Q8NEE6 735 aa17.08■□□□□ 0.32
ATG4B-201ENST00000344376 FAM3CQ92520 227 aa17.08■□□□□ 0.32
ATG4B-201ENST00000344376 USP13Q92995 863 aaPredicted RBP17.08■□□□□ 0.32
ATG4B-201ENST00000344376 LRRC3BQ96PB8 259 aa17.08■□□□□ 0.32
ATG4B-201ENST00000344376 TTLL2Q9BWV7 592 aa17.08■□□□□ 0.32
ATG4B-201ENST00000344376 DMAP1Q9NPF5 467 aaPredicted RBP17.08■□□□□ 0.32
ATG4B-201ENST00000344376 TRIM49BA6NDI0 452 aa17.07■□□□□ 0.32
ATG4B-201ENST00000344376 RTN3O95197 1032 aaPredicted RBP17.07■□□□□ 0.32
ATG4B-201ENST00000344376 PFKLP17858 780 aa17.07■□□□□ 0.32
ATG4B-201ENST00000344376 HOXD11P31277 338 aaPredicted RBP17.07■□□□□ 0.32
ATG4B-201ENST00000344376 WDR44Q5JSH3 913 aa17.07■□□□□ 0.32
ATG4B-201ENST00000344376 ZFYVE19Q96K21 471 aa17.07■□□□□ 0.32
ATG4B-201ENST00000344376 SLITRK1Q96PX8 696 aa17.07■□□□□ 0.32
ATG4B-201ENST00000344376 KRT82Q9NSB4 513 aa17.07■□□□□ 0.32
ATG4B-201ENST00000344376 ARMCX3Q9UH62 379 aaPredicted RBP17.07■□□□□ 0.32
ATG4B-201ENST00000344376 NDRG2Q9UN36 371 aaKnown RBP17.07■□□□□ 0.32
ATG4B-201ENST00000344376 MTF2Q9Y483 593 aaPredicted RBP17.07■□□□□ 0.32
ATG4B-201ENST00000344376 BICDL2A1A5D9 508 aa17.06■□□□□ 0.32
ATG4B-201ENST00000344376 LRRN2O75325 713 aa17.06■□□□□ 0.32
ATG4B-201ENST00000344376 MRE11P49959 708 aa17.06■□□□□ 0.32
ATG4B-201ENST00000344376 PMS1P54277 932 aaKnown RBP17.06■□□□□ 0.32
ATG4B-201ENST00000344376 USP46P62068 366 aa17.06■□□□□ 0.32
ATG4B-201ENST00000344376 INCA1Q0VD86 236 aa17.06■□□□□ 0.32
ATG4B-201ENST00000344376 KLHL10Q6JEL2 608 aa17.06■□□□□ 0.32
ATG4B-201ENST00000344376 ALYREFQ86V81 257 aaKnown RBP17.06■□□□□ 0.32
ATG4B-201ENST00000344376 C1orf210Q8IVY1 113 aa17.06■□□□□ 0.32
ATG4B-201ENST00000344376 NUP93Q8N1F7 819 aa17.06■□□□□ 0.32
ATG4B-201ENST00000344376 CRYBG2Q8N1P7 616 aa17.06■□□□□ 0.32
ATG4B-201ENST00000344376 TTC39CQ8N584 583 aa17.06■□□□□ 0.32
ATG4B-201ENST00000344376 FAXDC2Q96IV6 333 aa17.06■□□□□ 0.32
ATG4B-201ENST00000344376 CEP63Q96MT8 703 aa17.06■□□□□ 0.32
ATG4B-201ENST00000344376 NT5C1AQ9BXI3 368 aa17.06■□□□□ 0.32
ATG4B-201ENST00000344376 APOBEC3GQ9HC16 384 aaKnown RBP17.06■□□□□ 0.32
ATG4B-201ENST00000344376 METTL14Q9HCE5 456 aaKnown RBP17.06■□□□□ 0.32
ATG4B-201ENST00000344376 SPATA6Q9NWH7 488 aaPredicted RBP17.06■□□□□ 0.32
ATG4B-201ENST00000344376 RAB20Q9NX57 234 aa17.06■□□□□ 0.32
ATG4B-201ENST00000344376 CCL26Q9Y258 94 aa17.06■□□□□ 0.32
ATG4B-201ENST00000344376 AP1G2O75843 785 aa17.06■□□□□ 0.32
ATG4B-201ENST00000344376 CD58P19256 250 aa17.06■□□□□ 0.32
ATG4B-201ENST00000344376 RPS9P46781 194 aaKnown RBP17.06■□□□□ 0.32
ATG4B-201ENST00000344376 CACNA2D1P54289 1103 aa17.06■□□□□ 0.32
ATG4B-201ENST00000344376 IFRD2Q12894 506 aaPredicted RBP17.06■□□□□ 0.32
ATG4B-201ENST00000344376 ORC1Q13415 861 aa17.06■□□□□ 0.32
ATG4B-201ENST00000344376 RALGPS2Q86X27 583 aaPredicted RBP17.06■□□□□ 0.32
ATG4B-201ENST00000344376 FUKQ8N0W3 1084 aa17.06■□□□□ 0.32
ATG4B-201ENST00000344376 PDZD8Q8NEN9 1154 aa17.06■□□□□ 0.32
ATG4B-201ENST00000344376 SLC2A14Q8TDB8 520 aa17.06■□□□□ 0.32
ATG4B-201ENST00000344376 CLDN23Q96B33 292 aa17.06■□□□□ 0.32
ATG4B-201ENST00000344376 HMGXB4Q9UGU5 601 aa17.06■□□□□ 0.32
ATG4B-201ENST00000344376 COL4A3Q01955 1670 aa17.05■□□□□ 0.32
ATG4B-201ENST00000344376 BIN1O00499 593 aa17.05■□□□□ 0.32
ATG4B-201ENST00000344376 LAMTOR5O43504 91 aa17.05■□□□□ 0.32
ATG4B-201ENST00000344376 CCDC130P13994 396 aa17.05■□□□□ 0.32
ATG4B-201ENST00000344376 HDCP19113 662 aa17.05■□□□□ 0.32
ATG4B-201ENST00000344376 YWHAQP27348 245 aa17.05■□□□□ 0.32
ATG4B-201ENST00000344376 TAF10Q12962 218 aa17.05■□□□□ 0.32
ATG4B-201ENST00000344376 MORC3Q14149 939 aa17.05■□□□□ 0.32
ATG4B-201ENST00000344376 PDGFRLQ15198 375 aa17.05■□□□□ 0.32
ATG4B-201ENST00000344376 ITPRIPL2Q3MIP1 535 aa17.05■□□□□ 0.32
ATG4B-201ENST00000344376 CCDC40Q4G0X9 1142 aa17.05■□□□□ 0.32
ATG4B-201ENST00000344376 ARL14EPQ8N8R7 260 aaPredicted RBP17.05■□□□□ 0.32
ATG4B-201ENST00000344376 TTC16Q8NEE8 873 aa17.05■□□□□ 0.32
ATG4B-201ENST00000344376 NELFBQ8WX92 580 aa17.05■□□□□ 0.32
ATG4B-201ENST00000344376 FBXO32Q969P5 355 aa17.05■□□□□ 0.32
ATG4B-201ENST00000344376 GKN1Q9NS71 199 aa17.05■□□□□ 0.32
ATG4B-201ENST00000344376 FAM49BQ9NUQ9 324 aa17.05■□□□□ 0.32
ATG4B-201ENST00000344376 TMEM30AQ9NV96 361 aa17.05■□□□□ 0.32
ATG4B-201ENST00000344376 GTSE1Q9NYZ3 720 aa17.05■□□□□ 0.32
ATG4B-201ENST00000344376 C2orf78A6NCI8 922 aa17.04■□□□□ 0.32
ATG4B-201ENST00000344376 ZNF840PA6NDX5 716 aa17.04■□□□□ 0.32
ATG4B-201ENST00000344376 SPECC1L-ADORA2AF8WAN1 911 aa17.04■□□□□ 0.32
ATG4B-201ENST00000344376 CILPO75339 1184 aa17.04■□□□□ 0.32
ATG4B-201ENST00000344376 ABL1P00519 1130 aa17.04■□□□□ 0.32
ATG4B-201ENST00000344376 FAM200BP0CF97 657 aa17.04■□□□□ 0.32
ATG4B-201ENST00000344376 CD44P16070 742 aaKnown RBP17.04■□□□□ 0.32
ATG4B-201ENST00000344376 CTHP32929 405 aa17.04■□□□□ 0.32
ATG4B-201ENST00000344376 TNK2Q07912 1038 aa17.04■□□□□ 0.32
ATG4B-201ENST00000344376 LRRC32Q14392 662 aa17.04■□□□□ 0.32
ATG4B-201ENST00000344376 MTF1Q14872 753 aa17.04■□□□□ 0.32
ATG4B-201ENST00000344376 FOXR2Q6PJQ5 311 aa17.04■□□□□ 0.32
ATG4B-201ENST00000344376 PAQR9Q6ZVX9 377 aa17.04■□□□□ 0.32
ATG4B-201ENST00000344376 FRMD5Q7Z6J6 570 aa17.04■□□□□ 0.32
ATG4B-201ENST00000344376 FILIP1Q7Z7B0 1213 aa17.04■□□□□ 0.32
ATG4B-201ENST00000344376 TRIML1Q8N9V2 468 aa17.04■□□□□ 0.32
ATG4B-201ENST00000344376 TTC8Q8TAM2 541 aa17.04■□□□□ 0.32
ATG4B-201ENST00000344376 OVCA2Q8WZ82 227 aa17.04■□□□□ 0.32
ATG4B-201ENST00000344376 SEMA4DQ92854 862 aa17.04■□□□□ 0.32
ATG4B-201ENST00000344376 CYP2S1Q96SQ9 504 aa17.04■□□□□ 0.32
ATG4B-201ENST00000344376 KCNK16Q96T55 309 aa17.04■□□□□ 0.32
ATG4B-201ENST00000344376 PHOX2BQ99453 314 aa17.04■□□□□ 0.32
ATG4B-201ENST00000344376 IER2Q9BTL4 223 aa17.04■□□□□ 0.32
ATG4B-201ENST00000344376 FAM124BQ9H5Z6 455 aaPredicted RBP17.04■□□□□ 0.32
ATG4B-201ENST00000344376 COMMD8Q9NX08 183 aa17.04■□□□□ 0.32
ATG4B-201ENST00000344376 GCNT4Q9P109 453 aa17.04■□□□□ 0.32
ATG4B-201ENST00000344376 ARHGAP26Q9UNA1 814 aa17.04■□□□□ 0.32
ATG4B-201ENST00000344376 CTNND2Q9UQB3 1225 aa17.04■□□□□ 0.32
ATG4B-201ENST00000344376 CACNA1HO95180 2353 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms